Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0960 Trochodendron aralioides HOM05D002556 ORTHO05D018153 1.3e-120 436.4 226 100.0
TAR636G3468 Trochodendron aralioides HOM05D002556 ORTHO05D003153 2.3e-56 223.0 183 70.5
Dinv44438 Davidia involucrata HOM05D002556 ORTHO05D003153 5.3e-37 158.7 199 51.3
Nn3g21259 Nelumbo nucifera HOM05D002556 ORTHO05D003153 3.0e-32 142.9 141 55.3
Nn3g21262 Nelumbo nucifera HOM05D002556 ORTHO05D003153 3.0e-32 142.9 141 55.3
Dinv38335 Davidia involucrata HOM05D002556 ORTHO05D003153 1.5e-31 140.6 168 51.2
Cfa015509 Carpinus fangiana HOM05D002556 ORTHO05D003153 3.8e-27 125.9 192 45.8
Duzib151G1179 Durio zibethinus HOM05D002556 ORTHO05D003153 5.2e-24 115.5 196 42.3
Potri.010G014700 Populus trichocarpa HOM05D002556 ORTHO05D003153 1.1e-23 114.4 172 47.7
Sabra10G0010100 Salix brachista HOM05D002556 ORTHO05D003153 7.5e-23 111.7 172 45.9
CiPaw.02G087500 Carya illinoinensis HOM05D002556 ORTHO05D003153 3.7e-22 109.4 182 41.8
Haze_01041 Corylus avellana HOM05D002556 ORTHO05D003153 3.7e-22 109.4 191 42.4
Manes.03G190200 Manihot esculenta HOM05D002556 ORTHO05D003153 3.7e-22 109.4 167 46.7
CSS0031733 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 6.3e-22 108.6 145 50.3
Thecc.04G275500 Theobroma cacao HOM05D002556 ORTHO05D003153 8.2e-22 108.2 193 41.5
Prupe.1G143500 Prunus persica HOM05D002556 ORTHO05D003153 1.4e-21 107.5 221 38.0
CSS0029361 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 1.8e-21 107.1 180 44.4
QL06p006973 Quercus lobata HOM05D002556 ORTHO05D003153 1.8e-21 107.1 189 44.4
CiPaw.01G154300 Carya illinoinensis HOM05D002556 ORTHO05D003153 4.1e-21 105.9 191 40.8
CSS0044142 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 7.0e-21 105.1 188 43.6
MBI19_g32770_MAGBIO Magnolia biondii HOM05D002556 ORTHO05D003153 4.5e-20 102.4 209 41.1
Rhsim02G0014300 Rhododendron simsii HOM05D002556 ORTHO05D003153 5.9e-20 102.1 187 43.3
vmacro15271 Vaccinium macrocarpon HOM05D002556 ORTHO05D003153 7.7e-20 101.7 188 42.0
Manes.15G018000 Manihot esculenta HOM05D002556 ORTHO05D003153 3.8e-19 99.4 184 43.5
Hma1.2p1_0078F.1_g040880 Hydrangea macrophylla HOM05D002556 ORTHO05D003153 1.9e-18 97.1 227 40.1
Gorai.011G184800 Gossypium raimondii HOM05D002556 ORTHO05D003153 1.2e-17 94.4 184 37.5
MD13G1175000 Malus domestica HOM05D002556 ORTHO05D003153 2.1e-17 93.6 238 33.2
Gohir.A10G102045 Gossypium hirsutum HOM05D002556 ORTHO05D003153 8.0e-17 91.7 184 36.4
Oeu022243.3 Olea europaea HOM05D002556 ORTHO05D003153 5.2e-16 89.0 199 40.2
DCAR_027119 Daucus carota HOM05D002556 ORTHO05D003153 2.2e-14 83.6 175 37.7
vmacro08216 Vaccinium macrocarpon HOM05D002556 ORTHO05D003153 3.7e-14 82.8 186 37.6
Ciclev10004184m.g Citrus clementina HOM05D002556 ORTHO05D003153 4.8e-14 82.4 187 39.0
Actinidia40218 Actinidia chinensis HOM05D002556 ORTHO05D003153 6.3e-14 82.0 188 37.8
ECA240G3552 Erigeron canadensis HOM05D002556 ORTHO05D003153 6.3e-14 82.0 195 33.8
Dinv32988 Davidia involucrata HOM05D002556 ORTHO05D003153 2.7e-12 76.6 156 39.7
RcHm_v2.0_Chr4g0420701 Rosa chinensis HOM05D002556 ORTHO05D003153 3.5e-12 76.3 186 35.5
MSTRG.24773 Avicennia marina HOM05D002556 ORTHO05D003153 4.5e-12 75.9 191 34.6
TWI09G1603 Tripterygium wilfordii HOM05D002556 ORTHO05D003153 4.5e-12 75.9 197 35.5
Actinidia23440 Actinidia chinensis HOM05D002556 ORTHO05D003153 7.7e-12 75.1 144 38.9
HanXRQChr13g0410841 Helianthus annuus HOM05D002556 ORTHO05D003153 1.0e-11 74.7 195 31.3
Atru.chr4.2739 Acer truncatum HOM05D002556 ORTHO05D003153 1.3e-11 74.3 216 37.0
Lju2000A0T43 Lonicera japonica HOM05D002556 ORTHO05D018153 1.3e-11 74.3 190 35.8
Nitab4.5_0000303g0020 Nicotiana tabacum HOM05D002556 ORTHO05D003153 1.3e-11 74.3 229 32.8
Lju170A29T32 Lonicera japonica HOM05D002556 ORTHO05D018153 1.7e-11 73.9 189 34.9
MD16G1176700 Malus domestica HOM05D002556 ORTHO05D003153 1.7e-11 73.9 144 36.8
Atru.chr6.737 Acer truncatum HOM05D053160 ORTHO05D018153 2.9e-11 73.2 129 45.0
PGR031G1073 Punica granatum HOM05D002556 ORTHO05D003153 5.0e-11 72.4 193 33.7
Lju1034C2G16 Lonicera japonica HOM05D002556 ORTHO05D018153 6.5e-11 72.0 157 36.9
FAN22G1976 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.1e-10 71.2 131 39.7
Cpa.g.sc183.31 Carica papaya HOM05D002556 ORTHO05D003153 1.5e-10 70.9 191 33.0
Eucgr.B01260 Eucalyptus grandis HOM05D002556 ORTHO05D003153 3.2e-10 69.7 172 38.4
Aqoxy2G03140 Aquilegia oxysepala HOM05D002556 ORTHO05D003153 5.5e-10 68.9 149 42.3
Nitab4.5_0006501g0050 Nicotiana tabacum HOM05D002556 ORTHO05D003153 1.2e-09 67.8 234 29.1
COL.COLO4_13950 Corchorus olitorius HOM05D002556 ORTHO05D003153 2.7e-09 66.6 172 36.0
Cc03_g02500 Coffea canephora HOM05D002556 ORTHO05D003153 3.6e-09 66.2 178 36.0
CiPaw.08G100700 Carya illinoinensis HOM05D002556 ORTHO05D003153 4.7e-09 65.9 144 38.2
FvH4_4g17010 Fragaria vesca HOM05D002556 ORTHO05D003153 4.7e-09 65.9 125 40.0
FAN12G2677 Fragaria x ananassa HOM05D002556 ORTHO05D003153 4.7e-09 65.9 125 40.0
FAN07G2116 Fragaria x ananassa HOM05D002556 ORTHO05D003153 8.0e-09 65.1 144 36.8
Lju225A1T16 Lonicera japonica HOM05D002556 ORTHO05D018153 8.0e-09 65.1 112 40.2
Lj6C667G18 Lonicera japonica HOM05D002556 ORTHO05D003153 1.0e-08 64.7 138 39.1
FAN12G0875 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.8e-08 63.9 124 39.5
Gohir.D10G165600 Gossypium hirsutum HOM05D002556 ORTHO05D003153 1.8e-08 63.9 127 35.4
Gorai.005G056800 Gossypium raimondii HOM05D002556 ORTHO05D003153 1.8e-08 63.9 176 34.1
Peaxi162Scf01067g00025 Petunia axillaris HOM05D002556 ORTHO05D003153 1.8e-08 63.9 130 38.5
Atru.chr11.2268 Acer truncatum HOM05D053160 ORTHO05D018153 3.0e-08 63.2 126 40.5
Rhsim04G0215200 Rhododendron simsii HOM05D002556 ORTHO05D003153 5.2e-08 62.4 211 32.2
TWI59G0842 Tripterygium wilfordii HOM05D002556 ORTHO05D003153 5.2e-08 62.4 113 38.9
Sopen01g029750 Solanum pennellii HOM05D002556 ORTHO05D003153 1.2e-07 61.2 222 30.6
Manes.05G068700 Manihot esculenta HOM05D002556 ORTHO05D003153 2.0e-07 60.5 113 38.1
PGSC0003DMG400022845 Solanum tuberosum HOM05D002556 ORTHO05D003153 4.4e-07 59.3 136 34.6
Atru.chr4.237 Acer truncatum HOM05D000080 ORTHO05D001194 5.7e-07 58.9 126 38.1
Duzib212G1036 Durio zibethinus HOM05D002556 ORTHO05D003153 7.5e-07 58.5 128 37.5
CANSAT78G1274 Cannabis sativa HOM05D002556 ORTHO05D003153 9.8e-07 58.2 131 41.2
ATR0706G247 Amborella trichopoda HOM05D002556 ORTHO05D003153 1.7e-06 57.4 138 38.4
DCAR_024620 Daucus carota HOM05D002556 ORTHO05D003153 2.2e-06 57.0 193 31.6
Solyc01g067790.3 Solanum lycopersicum HOM05D002556 ORTHO05D003153 2.8e-06 56.6 213 31.0
CDE01G0573 Ceratophyllum demersum HOM05D002556 ORTHO05D043876 3.7e-06 56.2 201 31.8
Aqoxy5G00635 Aquilegia oxysepala HOM05D002556 ORTHO05D003153 4.9e-06 55.8 143 35.7


User provided reference genes

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