Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 2.5e-104 382.1 194 100.0
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 5.9e-77 291.2 189 76.2
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 1.0e-76 290.4 193 75.1
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 2.7e-74 282.3 186 74.2
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 8.0e-74 280.8 203 69.5
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 8.8e-73 277.3 185 73.5
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 4.4e-72 275.0 217 67.7
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 9.7e-72 273.9 171 78.4
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 3.7e-71 271.9 185 75.1
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 1.1e-70 270.4 185 73.0
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 1.4e-70 270.0 189 68.8
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 1.8e-70 269.6 188 71.3
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 5.3e-70 268.1 192 69.3
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 7.0e-70 267.7 183 71.0
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 1.2e-69 266.9 190 68.9
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 1.6e-69 266.5 189 70.4
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 2.0e-69 266.2 194 71.1
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 2.0e-69 266.2 189 68.8
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 4.5e-69 265.0 190 68.4
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 1.7e-68 263.1 181 71.3
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 2.2e-68 262.7 182 70.9
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 2.2e-68 262.7 190 67.4
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 2.9e-68 262.3 232 61.2
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 6.5e-68 261.2 193 67.4
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 6.5e-68 261.2 185 70.8
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 6.5e-68 261.2 187 72.2
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 1.5e-67 260.0 184 69.6
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 3.2e-67 258.8 164 77.4
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 5.5e-67 258.1 187 70.1
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 9.4e-67 257.3 176 72.2
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.2e-66 256.9 181 70.7
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 1.2e-66 256.9 185 70.3
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 2.1e-66 256.1 190 68.9
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 4.7e-66 255.0 179 68.2
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 6.1e-66 254.6 199 65.3
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 8.0e-66 254.2 192 69.8
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 1.0e-65 253.8 191 67.5
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 1.0e-65 253.8 191 69.1
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.4e-65 253.4 191 68.6
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 2.3e-65 252.7 191 68.6
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 2.3e-65 252.7 199 64.8
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 4.0e-65 251.9 200 62.5
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 1.2e-64 250.4 188 68.1
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 2.0e-64 249.6 200 62.0
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 2.6e-64 249.2 200 62.0
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 4.4e-64 248.4 199 63.3
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 5.7e-64 248.1 184 66.8
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 5.7e-64 248.1 190 67.4
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 7.5e-64 247.7 199 64.8
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 1.3e-63 246.9 184 69.0
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 1.3e-63 246.9 179 68.7
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 1.7e-63 246.5 182 68.1
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.7e-63 245.4 205 62.9
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 8.3e-63 244.2 199 60.3
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 3.1e-62 242.3 190 65.3
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.2e-61 240.4 181 65.7
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 2.7e-61 239.2 189 63.0
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 3.5e-61 238.8 185 63.8
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 3.5e-61 238.8 185 66.5
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 3.5e-61 238.8 189 63.0
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 5.9e-61 238.0 183 65.6
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 7.7e-61 237.7 191 62.3
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 1.0e-60 237.3 187 64.7
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 1.3e-60 236.9 182 64.3
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 2.2e-60 236.1 183 65.0
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 6.5e-60 234.6 181 64.6
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 2.5e-59 232.6 173 65.3
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 2.5e-59 232.6 182 63.2
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 1.2e-58 230.3 187 64.7
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 4.7e-58 228.4 186 65.1
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 8.0e-58 227.6 188 60.6
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 1.8e-57 226.5 184 59.2
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 4.0e-57 225.3 192 63.0
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 6.8e-57 224.6 194 60.3
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 2.0e-56 223.0 193 60.1
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 2.0e-56 223.0 186 61.8
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 3.4e-56 222.2 173 63.6
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 2.8e-55 219.2 186 60.2
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 1.0e-52 210.7 188 58.5
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 8.6e-52 207.6 165 64.2
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 2.5e-51 206.1 184 59.8
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 8.0e-50 201.1 192 55.2
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 1.0e-49 200.7 177 58.2
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 2.6e-48 196.1 177 59.9
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 1.7e-47 193.4 185 51.9
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 6.4e-47 191.4 174 57.5
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 1.4e-46 190.3 174 56.9
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 5.4e-46 188.3 188 55.3
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 2.7e-45 186.0 182 53.8
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 5.9e-45 184.9 177 54.2
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 5.9e-45 184.9 177 54.2
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 1.3e-44 183.7 177 54.8
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 1.3e-44 183.7 166 56.6
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 1.5e-43 180.3 178 53.9
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 3.3e-43 179.1 178 53.4
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 4.3e-43 178.7 197 52.3
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 3.6e-42 175.6 177 55.4
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 3.6e-42 175.6 177 52.5
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 4.7e-42 175.3 177 55.4
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 4.7e-42 175.3 177 55.4
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 1.4e-41 173.7 177 54.8
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 1.4e-41 173.7 177 54.8
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 3.1e-41 172.6 166 53.0
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 2.9e-39 166.0 177 50.8
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 4.9e-39 165.2 125 67.2
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 1.2e-37 160.6 185 46.5
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.0e-36 157.5 93 79.6
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 1.1e-35 154.1 128 59.4
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 2.1e-34 149.8 177 50.3
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 7.1e-30 134.8 89 70.8
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 1.9e-22 110.2 190 37.4
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 2.4e-22 109.8 100 59.0
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 5.4e-22 108.6 191 38.7
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 7.1e-22 108.2 190 36.3
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 5.4e-14 82.0 116 39.7
SMO337G0092 Selaginella moellendorffii HOM05D006799 ORTHO05D008391 3.6e-10 69.3 175 28.0
Ca_19566_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 5.8e-08 62.0 39 69.2
CDE05G1628 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 1.1e-06 57.8 72 50.0


User provided reference genes

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