Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.1e-100 369.0 183 100.0
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 4.7e-84 314.7 183 85.8
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 1.9e-77 292.7 183 81.4
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 5.8e-74 281.2 184 76.1
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 3.7e-73 278.5 183 76.5
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 4.9e-73 278.1 183 77.0
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 4.1e-72 275.0 183 76.0
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 7.0e-72 274.2 185 73.5
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 9.2e-72 273.9 183 74.9
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 7.8e-71 270.8 183 74.3
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.7e-70 269.6 184 76.1
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.3e-70 269.2 184 76.1
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 8.6e-70 267.3 182 74.2
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.1e-69 266.9 184 75.5
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 1.1e-69 266.9 184 72.3
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.9e-69 266.2 182 73.1
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.5e-69 265.8 182 73.1
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 2.5e-69 265.8 184 75.0
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.5e-69 265.8 184 75.0
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 2.5e-69 265.8 184 76.1
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 9.5e-69 263.8 185 76.8
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 2.1e-68 262.7 184 74.5
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 2.1e-68 262.7 184 74.5
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 2.8e-68 262.3 185 73.5
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 3.6e-68 261.9 184 74.5
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 1.8e-67 259.6 183 71.6
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 5.2e-67 258.1 185 73.5
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.2e-66 256.9 184 72.3
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 3.4e-66 255.4 186 73.7
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 5.8e-66 254.6 183 69.9
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 2.9e-65 252.3 183 73.8
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 3.7e-65 251.9 184 71.7
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 1.4e-64 250.0 184 69.6
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.2e-64 248.8 183 71.0
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 3.2e-64 248.8 183 70.5
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 4.1e-64 248.4 184 71.2
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 4.1e-64 248.4 184 69.6
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 4.1e-64 248.4 183 70.5
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 4.1e-64 248.4 183 70.5
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 1.2e-63 246.9 183 69.9
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 1.6e-63 246.5 191 70.2
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 2.0e-63 246.1 183 69.4
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 2.7e-63 245.7 184 70.1
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 3.5e-63 245.4 183 69.4
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 7.8e-63 244.2 184 71.7
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.3e-62 243.4 168 77.4
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 1.7e-62 243.0 184 69.6
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 8.6e-62 240.7 184 70.1
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.5e-61 240.0 183 68.9
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 1.9e-61 239.6 184 68.5
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 3.3e-61 238.8 184 69.6
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 4.3e-61 238.4 183 67.2
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.6e-60 236.5 183 66.7
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 2.8e-60 235.7 183 68.3
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 2.8e-60 235.7 183 68.3
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 6.2e-60 234.6 153 78.4
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.4e-59 233.4 184 63.6
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 1.4e-59 233.4 145 80.7
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 2.3e-59 232.6 184 66.3
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 3.1e-59 232.3 184 68.5
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 3.1e-59 232.3 183 66.7
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 8.9e-59 230.7 184 65.2
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 8.9e-59 230.7 148 77.7
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.5e-58 229.9 184 66.8
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 4.4e-58 228.4 152 75.0
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 9.9e-58 227.3 173 67.1
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 9.9e-58 227.3 184 65.8
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 6.4e-57 224.6 184 65.2
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 1.1e-56 223.8 183 62.8
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 1.4e-56 223.4 185 64.9
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.4e-56 223.4 183 62.8
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 2.4e-56 222.6 199 59.8
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 3.2e-56 222.2 183 63.9
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 5.4e-56 221.5 182 64.8
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 5.4e-56 221.5 182 65.4
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 1.6e-55 219.9 182 64.8
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.6e-55 219.9 183 64.5
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 2.1e-55 219.5 188 64.4
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 2.7e-55 219.2 184 65.2
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 2.3e-54 216.1 184 62.0
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 3.0e-54 215.7 183 60.7
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 6.6e-54 214.5 185 61.1
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 6.6e-54 214.5 162 67.3
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 6.6e-54 214.5 114 91.2
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 8.6e-54 214.2 144 72.9
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 1.1e-53 213.8 160 67.5
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 1.5e-53 213.4 183 59.0
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 1.5e-53 213.4 162 66.7
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 1.5e-53 213.4 151 68.2
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.5e-53 213.4 186 62.4
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 1.9e-53 213.0 184 59.2
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 3.3e-53 212.2 184 60.9
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 3.3e-53 212.2 184 60.9
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 7.3e-53 211.1 187 61.0
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 9.5e-53 210.7 182 63.7
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 9.5e-53 210.7 116 87.9
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 9.5e-53 210.7 152 67.1
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.6e-52 209.9 183 57.9
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 3.6e-52 208.8 183 59.0
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 4.7e-52 208.4 189 63.5
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 1.1e-51 207.2 182 60.4
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 1.8e-51 206.5 187 59.4
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 1.8e-51 206.5 185 61.6
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 3.1e-51 205.7 116 85.3
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 8.9e-51 204.1 176 59.7
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 8.9e-51 204.1 115 85.2
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 8.9e-51 204.1 176 66.5
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 5.8e-50 201.4 185 60.0
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 7.6e-50 201.1 131 74.0
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 1.7e-49 199.9 129 76.0
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 4.1e-48 195.3 174 58.0
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 2.1e-47 193.0 115 80.0
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 1.0e-46 190.7 183 59.6
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 3.4e-42 175.6 161 55.9
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 3.2e-40 169.1 115 71.3
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 5.4e-40 168.3 109 72.5
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 2.1e-39 166.4 157 54.8
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.8e-35 153.3 126 62.7
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 4.5e-34 148.7 117 56.4
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 5.8e-34 148.3 110 60.9
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 1.9e-32 143.3 109 60.6
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 3.2e-32 142.5 106 60.4
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 6.2e-28 128.3 104 67.3
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 5.3e-27 125.2 69 92.8
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.2e-23 114.0 175 44.6
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 5.1e-22 108.6 109 56.9
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 1.3e-20 104.0 59 81.4
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 1.3e-20 104.0 59 81.4
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 1.6e-15 87.0 64 67.2


User provided reference genes

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