Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 2.7e-32 141.4 69 100.0
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.4e-17 91.7 69 65.2
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 9.3e-17 89.7 69 62.3
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 9.3e-17 89.7 69 62.3
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.1e-16 88.6 69 60.9
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 6.0e-16 87.0 54 74.1
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.0e-15 86.3 69 56.5
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 1.3e-15 85.9 69 59.4
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.1e-15 84.0 68 58.8
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 6.6e-15 83.6 72 59.7
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 6.6e-15 83.6 69 56.5
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 8.7e-15 83.2 69 58.0
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 1.1e-14 82.8 65 60.0
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 1.9e-14 82.0 65 60.0
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.5e-14 81.6 68 57.4
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 4.3e-14 80.9 70 57.1
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.6e-14 80.5 68 55.9
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 9.6e-14 79.7 69 55.1
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-13 79.3 69 58.0
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.6e-13 79.0 69 53.6
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 1.6e-13 79.0 69 58.0
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 2.1e-13 78.6 69 55.1
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 2.8e-13 78.2 70 55.7
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.8e-13 78.2 70 57.1
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 3.6e-13 77.8 70 60.0
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 3.6e-13 77.8 73 54.8
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 4.8e-13 77.4 65 56.9
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 4.8e-13 77.4 68 57.4
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.2e-13 77.0 68 55.9
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 6.2e-13 77.0 69 56.5
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 6.2e-13 77.0 71 56.3
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 8.1e-13 76.6 69 56.5
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 8.1e-13 76.6 69 56.5
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-12 76.3 68 54.4
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-12 76.3 69 58.0
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.4e-12 75.9 64 48.4
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.4e-12 75.9 69 52.2
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 1.4e-12 75.9 69 53.6
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-12 75.5 68 54.4
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 2.4e-12 75.1 72 55.6
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 3.1e-12 74.7 70 52.9
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.1e-12 74.7 69 52.2
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 3.1e-12 74.7 77 53.2
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.0e-12 74.3 68 52.9
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 4.0e-12 74.3 70 52.9
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 4.0e-12 74.3 68 52.9
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.3e-12 73.9 70 54.3
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.9e-12 73.6 68 51.5
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 6.9e-12 73.6 70 52.9
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 6.9e-12 73.6 70 52.9
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 6.9e-12 73.6 68 51.5
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 6.9e-12 73.6 70 54.3
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 9.0e-12 73.2 68 52.9
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 9.0e-12 73.2 69 52.2
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.2e-11 72.8 64 51.6
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 1.5e-11 72.4 69 46.4
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-11 72.4 67 53.7
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-11 72.4 60 60.0
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 2.0e-11 72.0 69 53.6
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-11 72.0 68 50.0
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 2.0e-11 72.0 70 57.1
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 2.6e-11 71.6 70 51.4
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 2.6e-11 71.6 63 57.1
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 4.5e-11 70.9 65 53.8
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 7.6e-11 70.1 70 54.3
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 7.6e-11 70.1 66 53.0
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.3e-10 69.3 71 56.3
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 1.3e-10 69.3 71 52.1
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.7e-10 68.9 68 54.4
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.7e-10 68.9 71 53.5
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 2.2e-10 68.6 69 49.3
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 2.2e-10 68.6 67 53.7
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.9e-10 68.2 68 54.4
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 2.9e-10 68.2 71 47.9
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 2.9e-10 68.2 69 49.3
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 2.9e-10 68.2 63 55.6
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.8e-10 67.8 71 53.5
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 6.4e-10 67.0 69 47.8
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.4e-10 66.6 71 50.7
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 1.9e-09 65.5 71 49.3
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 3.2e-09 64.7 69 47.8
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.2e-09 64.3 71 56.3
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.2e-09 64.3 71 56.3
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.2e-09 64.3 75 53.3
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.2e-09 64.3 68 50.0
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 5.4e-09 63.9 59 47.5
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.1e-09 63.5 71 54.9
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.3e-09 63.2 67 52.2
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-08 62.8 69 52.2
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-08 62.8 74 52.7
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 1.2e-08 62.8 76 48.7
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.1e-08 62.0 74 52.7
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.1e-08 62.0 74 52.7
Nn1g09674 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.1e-08 62.0 73 50.7
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-08 61.6 74 52.7
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 2.7e-08 61.6 64 43.8
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 2.7e-08 61.6 67 50.7
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 3.5e-08 61.2 65 47.7
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 3.5e-08 61.2 40 60.0
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.6e-08 60.8 67 50.7
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 4.6e-08 60.8 67 49.3
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 1.8e-07 58.9 60 55.0
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 1.8e-07 58.9 76 48.7
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 1.8e-07 58.9 67 47.8
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.0e-07 58.2 68 47.1
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 3.0e-07 58.2 68 54.4
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 3.0e-07 58.2 73 42.5
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 3.0e-07 58.2 67 47.8
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.1e-07 57.4 46 56.5
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 8.7e-07 56.6 61 47.5
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 1.5e-06 55.8 71 40.8
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 1.5e-06 55.8 72 44.4
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 4.3e-06 54.3 63 46.0
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 5.6e-06 53.9 76 38.2
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.4e-06 53.5 69 52.2


User provided reference genes

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