Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0891 Trochodendron aralioides HOM05D015611 ORTHO05D005145 3.9e-312 1073.5 568 100.0
TAR375G1135 Trochodendron aralioides HOM05D004311 ORTHO05D005145 1.2e-42 178.7 245 44.1
Nn2g11494 Nelumbo nucifera HOM05D004311 ORTHO05D005145 4.3e-35 153.7 493 33.9
Dinv22688 Davidia involucrata HOM05D004311 ORTHO05D005145 1.0e-28 132.5 487 28.7
Dinv44218 Davidia involucrata HOM05D004311 ORTHO05D005145 6.4e-23 113.2 447 30.4
CSS0021437 Camellia sinensis var. sinensis HOM05D004311 ORTHO05D005145 1.3e-20 105.5 234 32.5
TAR374G0693 Trochodendron aralioides HOM05D015611 ORTHO05D005145 1.9e-19 101.7 76 63.2
Prupe.1G188800 Prunus persica HOM05D004311 ORTHO05D005145 3.4e-16 90.9 138 38.4
Rhsim09G0031800 Rhododendron simsii HOM05D004311 ORTHO05D005145 1.9e-14 85.1 177 34.5
PSO017G7323 Papaver somniferum HOM05D004311 ORTHO05D005145 5.5e-14 83.6 96 45.8
PSO384G3421 Papaver somniferum HOM05D015611 ORTHO05D026019 2.1e-13 81.6 122 39.3
CiPaw.01G102900 Carya illinoinensis HOM05D004311 ORTHO05D005145 3.5e-13 80.9 121 42.1
QL10p045440 Quercus lobata HOM05D004311 ORTHO05D005145 3.5e-13 80.9 96 51.0
Cfa015780 Carpinus fangiana HOM05D004311 ORTHO05D005145 6.0e-13 80.1 127 40.9
Actinidia35905 Actinidia chinensis HOM05D004311 ORTHO05D005145 7.9e-13 79.7 338 27.5
TWI60G0507 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 5.1e-12 77.0 128 37.5
Eucgr.A00251 Eucalyptus grandis HOM05D004311 ORTHO05D005145 8.7e-12 76.3 235 30.2
PSO339G0153 Papaver somniferum HOM05D015611 ORTHO05D026019 8.7e-12 76.3 123 37.4
vmacro00590 Vaccinium macrocarpon HOM05D004311 ORTHO05D005145 2.5e-11 74.7 152 36.8
Lj6A60T47 Lonicera japonica HOM05D004311 ORTHO05D005145 3.3e-11 74.3 146 37.0
GSVIVG01013563001 Vitis vinifera HOM05D004311 ORTHO05D005145 3.3e-11 74.3 116 36.2
Aqoxy5G04052 Aquilegia oxysepala HOM05D004311 ORTHO05D005145 4.3e-11 73.9 341 28.4
Haze_00714 Corylus avellana HOM05D004311 ORTHO05D005145 7.4e-11 73.2 359 27.3
Ciclev10019191m.g Citrus clementina HOM05D004311 ORTHO05D005145 1.3e-10 72.4 284 27.1
PSO339G2231 Papaver somniferum HOM05D015611 ORTHO05D026019 2.1e-10 71.6 228 28.5
TWI34G1341 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 2.1e-10 71.6 271 26.2
Thecc.04G184200 Theobroma cacao HOM05D004311 ORTHO05D005145 2.8e-10 71.2 230 29.1
PSO675G5961 Papaver somniferum HOM05D004311 ORTHO05D005145 1.1e-09 69.3 81 45.7
RcHm_v2.0_Chr4g0407521 Rosa chinensis HOM05D004311 ORTHO05D005145 1.8e-09 68.6 151 35.8
FAN17G0085 Fragaria x ananassa HOM05D004311 ORTHO05D005145 2.4e-09 68.2 110 40.0
Sed0012126 Sechium edule HOM05D004311 ORTHO05D005145 3.1e-09 67.8 353 23.5
MBI08_g33649_MAGBIO Magnolia biondii HOM05D004311 ORTHO05D005145 6.9e-09 66.6 384 27.1
FAN07G0445 Fragaria x ananassa HOM05D004311 ORTHO05D005145 1.5e-08 65.5 106 40.6
FvH4_4g11290 Fragaria vesca HOM05D004311 ORTHO05D005145 2.6e-08 64.7 105 39.0
arahy.Tifrunner.gnm1.ann1.TTS68P Arachis hypogaea HOM05D004311 ORTHO05D005145 7.6e-08 63.2 122 35.2
arahy.Tifrunner.gnm1.ann1.D3CYL9 Arachis hypogaea HOM05D004311 ORTHO05D005145 1.0e-07 62.8 105 37.1
Sabra07G0100500 Salix brachista HOM05D004311 ORTHO05D005145 1.0e-07 62.8 439 25.3
CsaV3_4G003570 Cucumis sativus L. HOM05D004311 ORTHO05D005145 1.7e-07 62.0 192 31.8
Manes.11G116001 Manihot esculenta HOM05D004311 ORTHO05D005145 1.7e-07 62.0 114 37.7
PSO170G3519 Papaver somniferum HOM05D015611 ORTHO05D026019 1.7e-07 62.0 52 51.9
PGR083G0820 Punica granatum HOM05D004311 ORTHO05D005145 2.2e-07 61.6 111 36.0
CANSAT78G0609 Cannabis sativa HOM05D004311 ORTHO05D005145 2.9e-07 61.2 90 35.6
CANSAT01G2758 Cannabis sativa HOM05D004311 ORTHO05D005145 6.5e-07 60.1 60 43.3
Hma1.2p1_0429F.1_g151120 Hydrangea macrophylla HOM05D004311 ORTHO05D005145 6.5e-07 60.1 157 31.2
Duzib151G0942 Durio zibethinus HOM05D004311 ORTHO05D005145 1.1e-06 59.3 122 34.4
Atru.chr5.2612 Acer truncatum HOM05D004311 ORTHO05D005145 1.4e-06 58.9 193 28.0
CANSAT11G1749 Cannabis sativa HOM05D004311 ORTHO05D005145 1.4e-06 58.9 59 42.4
MD04G1038400 Malus domestica HOM05D004311 ORTHO05D005145 1.4e-06 58.9 183 28.4
Potri.007G124150 Populus trichocarpa HOM05D004311 ORTHO05D005145 1.9e-06 58.5 133 33.1
Atru.chr3.1596 Acer truncatum HOM05D004311 ORTHO05D005145 4.2e-06 57.4 78 39.7
Sc19g0002150 Simmondsia chinensis HOM05D004311 ORTHO05D005145 5.5e-06 57.0 106 34.0
Nitab4.5_0006710g0020 Nicotiana tabacum HOM05D004311 ORTHO05D005145 7.1e-06 56.6 98 34.7


User provided reference genes

Program Settings