Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 4.9e-34 148.3 132 100.0
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 5.0e-18 95.1 124 83.1
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 4.2e-17 92.0 126 46.0
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 2.1e-16 89.7 124 72.6
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 2.7e-16 89.4 121 78.5
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 1.0e-15 87.4 124 79.0
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.3e-15 87.0 124 69.4
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.3e-15 87.0 124 69.4
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 1.8e-15 86.7 127 76.4
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 3.9e-15 85.5 124 76.6
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 6.7e-15 84.7 126 78.6
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.5e-14 83.6 124 70.2
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 2.5e-14 82.8 124 62.9
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.3e-14 82.4 125 71.2
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 3.3e-14 82.4 124 75.0
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 5.7e-14 81.6 121 75.2
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 7.4e-14 81.3 121 76.0
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 9.7e-14 80.9 120 67.5
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 9.7e-14 80.9 112 68.8
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.3e-13 80.5 123 67.5
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.2e-13 79.7 125 70.4
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 2.8e-13 79.3 121 75.2
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 2.8e-13 79.3 125 72.0
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 2.8e-13 79.3 121 71.1
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 3.7e-13 79.0 125 71.2
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 6.3e-13 78.2 128 71.1
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.1e-12 77.4 130 71.5
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 1.4e-12 77.0 124 41.1
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.1e-12 75.9 122 62.3
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 5.3e-12 75.1 121 68.6
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 9.0e-12 74.3 124 71.0
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.2e-11 73.9 124 66.9
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.2e-11 73.9 124 66.9
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 4.5e-11 72.0 111 43.2
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 5.9e-11 71.6 116 63.8
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 1.3e-10 70.5 115 67.0
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 1.7e-10 70.1 124 62.9
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 1.7e-10 70.1 123 69.9
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.9e-10 69.3 109 67.9
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 3.8e-10 68.9 124 68.5
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 3.8e-10 68.9 107 74.8
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 3.8e-10 68.9 130 66.2
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 5.0e-10 68.6 109 65.1
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 5.0e-10 68.6 127 70.9
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 6.5e-10 68.2 115 77.4
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 1.1e-09 67.4 124 57.3
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 1.4e-09 67.0 103 72.8
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 1.9e-09 66.6 126 70.6
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 2.5e-09 66.2 110 72.7
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 4.2e-09 65.5 122 76.2
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 5.5e-09 65.1 113 75.2
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 7.2e-09 64.7 122 76.2
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 1.2e-08 63.9 122 75.4
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 1.6e-08 63.5 50 72.0
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 1.6e-08 63.5 50 72.0
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 2.1e-08 63.2 50 66.0
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.1e-08 63.2 127 71.7
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 2.7e-08 62.8 112 58.9
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 2.7e-08 62.8 123 73.2
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 3.6e-08 62.4 47 63.8
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 1.4e-07 60.5 124 64.5
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 2.3e-07 59.7 126 62.7
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 3.9e-07 58.9 123 73.2
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 5.1e-07 58.5 125 69.6
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 5.1e-07 58.5 125 65.6
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 5.1e-07 58.5 126 70.6
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 8.8e-07 57.8 125 67.2
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 8.8e-07 57.8 126 65.1
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 1.5e-06 57.0 59 55.9
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 1.5e-06 57.0 121 71.9
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 1.5e-06 57.0 121 70.2
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 2.0e-06 56.6 48 66.7
MBI18_g14088_MAGBIO Magnolia biondii HOM05D000713 ORTHO05D000547 3.3e-06 55.8 125 36.8
Nitab4.5_0000960g0100 Nicotiana tabacum HOM05D006719 ORTHO05D007063 4.3e-06 55.5 128 68.0
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 5.7e-06 55.1 121 69.4
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 7.4e-06 54.7 125 46.4


User provided reference genes

Program Settings