Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 0.0e+00 1640.2 869 100.0
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 1.2e-97 362.1 1100 32.1
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 1.2e-84 318.9 898 33.9
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 3.9e-72 277.3 974 31.0
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 4.4e-71 273.9 903 29.3
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 4.4e-63 247.3 903 30.6
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 5.7e-63 246.9 904 28.5
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 5.0e-59 233.8 955 29.6
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 9.4e-58 229.6 863 30.5
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 3.1e-53 214.5 881 27.4
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 1.2e-52 212.6 1026 28.2
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 2.0e-52 211.8 908 28.2
Aqoxy2G03478 Aquilegia oxysepala HOM05D008144 ORTHO05D031257 1.0e-51 209.5 899 29.1
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 4.9e-46 190.7 907 29.1
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 5.4e-45 187.2 315 42.5
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 5.6e-42 177.2 929 28.4
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 4.7e-41 174.1 900 27.9
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 2.0e-39 168.7 889 26.3
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 2.2e-38 165.2 1142 25.0
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 2.2e-38 165.2 903 26.4
MBI11_g00116_MAGBIO Magnolia biondii HOM05D008144 ORTHO05D010081 2.9e-38 164.9 1133 25.4
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 1.1e-34 152.9 900 26.7
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 3.0e-27 128.3 473 29.0
Dinv14057 Davidia involucrata HOM05D008144 ORTHO05D010081 1.1e-21 109.8 287 35.9
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.0e-19 101.7 1031 25.6
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.0e-19 101.7 1031 25.6
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 3.3e-18 98.2 905 23.9
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 5.6e-18 97.4 1014 25.0
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 5.6e-18 97.4 1012 24.1
PSO461G0017 Papaver somniferum HOM05D042988 ORTHO05D031257 8.1e-17 93.6 865 24.7
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 6.8e-16 90.5 230 35.7
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 6.4e-14 84.0 139 37.4
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 8.4e-14 83.6 1023 24.6
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 7.1e-13 80.5 484 27.3
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 9.2e-13 80.1 157 42.7
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 2.7e-12 78.6 859 24.6
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 3.3e-10 71.6 296 31.1
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 7.3e-10 70.5 175 30.9
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 2.8e-09 68.6 170 32.9
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 3.6e-09 68.2 433 24.7
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 4.7e-09 67.8 725 24.4
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 3.4e-07 61.6 166 30.7
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 3.4e-07 61.6 179 27.9
TAR633G1669 Trochodendron aralioides HOM05D008144 ORTHO05D010081 5.8e-07 60.8 51 60.8
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 7.6e-07 60.5 282 26.6
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 7.6e-07 60.5 182 28.6
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 9.9e-07 60.1 597 23.5
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 3.8e-06 58.2 646 22.8


User provided reference genes

Program Settings