Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0841 Trochodendron aralioides HOM05D000029 ORTHO05D414651 1.9e-21 108.2 53 100.0
Lsat_1_v5_gn_5_181240 Lactuca sativa HOM05D000029 ORTHO05D003419 2.1e-12 78.2 51 66.7
Phvul.007G153400 Phaseolus vulgaris HOM05D000029 ORTHO05D003419 8.8e-11 72.8 52 69.2
Glyma.10G040500 Glycine max HOM05D000029 ORTHO05D003419 1.3e-09 68.9 52 63.5
TAR362G1074 Trochodendron aralioides HOM05D000029 ORTHO05D003419 1.1e-08 65.9 33 90.9
VMungo0720G1148 Vigna mungo HOM05D000029 ORTHO05D003419 1.4e-08 65.5 52 61.5
Peaxi162Scf00043g02712 Petunia axillaris HOM05D000029 ORTHO05D003419 2.4e-08 64.7 42 69.0
Nitab4.5_0000845g0190 Nicotiana tabacum HOM05D000029 ORTHO05D003419 6.9e-08 63.2 40 70.0
Nitab4.5_0007760g0010 Nicotiana tabacum HOM05D000029 ORTHO05D003419 6.9e-08 63.2 40 70.0
Dinv16405 Davidia involucrata HOM05D000029 ORTHO05D003419 1.2e-07 62.4 28 92.9
Dinv43067 Davidia involucrata HOM05D000029 ORTHO05D003419 1.2e-07 62.4 28 92.9
Cc01_g17780 Coffea canephora HOM05D000029 ORTHO05D003419 1.5e-07 62.0 28 92.9
Eucgr.K01425 Eucalyptus grandis HOM05D000029 ORTHO05D003419 1.5e-07 62.0 46 58.7
Lj1C74T11 Lonicera japonica HOM05D000029 ORTHO05D003419 1.5e-07 62.0 29 86.2
vmacro14794 Vaccinium macrocarpon HOM05D000029 ORTHO05D003419 1.5e-07 62.0 29 89.7
Dinv19268 Davidia involucrata HOM05D000029 ORTHO05D003419 2.6e-07 61.2 38 73.7
CAN.G536.14 Capsicum annuum HOM05D000029 ORTHO05D003419 3.4e-07 60.8 40 70.0
Solyc09g064520.3 Solanum lycopersicum HOM05D000029 ORTHO05D003419 3.4e-07 60.8 27 96.3
Sopen09g025680 Solanum pennellii HOM05D000029 ORTHO05D003419 3.4e-07 60.8 27 96.3
PGSC0003DMG400008581 Solanum tuberosum HOM05D000029 ORTHO05D003419 3.4e-07 60.8 27 96.3
GSVIVG01028433001 Vitis vinifera HOM05D002740 ORTHO05D003126 4.5e-07 60.5 44 63.6
Actinidia09514 Actinidia chinensis HOM05D000029 ORTHO05D003419 5.9e-07 60.1 28 89.3
Actinidia23699 Actinidia chinensis HOM05D000029 ORTHO05D003419 5.9e-07 60.1 28 89.3
Phvul.001G165100 Phaseolus vulgaris HOM05D000029 ORTHO05D003419 7.7e-07 59.7 36 72.2
PGR044G0540 Punica granatum HOM05D000029 ORTHO05D003419 7.7e-07 59.7 50 56.0
CSS0011455 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003419 1.0e-06 59.3 28 89.3
Migut.D00478 Erythranthe guttata HOM05D000029 ORTHO05D003419 1.0e-06 59.3 28 85.7
BcaNung04293 Brassica carinata HOM05D000029 ORTHO05D003419 1.3e-06 58.9 29 86.2
Oeu052081.1 Olea europaea HOM05D000029 ORTHO05D003419 1.3e-06 58.9 28 89.3
Hund05489 Selenicereus undatus HOM05D000029 ORTHO05D003419 1.3e-06 58.9 28 89.3
Atru.chr5.1861 Acer truncatum HOM05D000029 ORTHO05D003419 1.7e-06 58.5 28 85.7
CANSAT01G0422 Cannabis sativa HOM05D000029 ORTHO05D003419 1.7e-06 58.5 28 85.7
FvH4_2g20490 Fragaria vesca HOM05D000029 ORTHO05D003419 1.7e-06 58.5 28 85.7
FAN15G0985 Fragaria x ananassa HOM05D000029 ORTHO05D003419 1.7e-06 58.5 28 85.7
FAN24G1201 Fragaria x ananassa HOM05D000029 ORTHO05D003419 1.7e-06 58.5 28 85.7
FAN27G1151 Fragaria x ananassa HOM05D000029 ORTHO05D003419 1.7e-06 58.5 28 85.7
Glyma.19G168600 Glycine max HOM05D000029 ORTHO05D003419 2.2e-06 58.2 37 67.6
Gohir.A07G152500 Gossypium hirsutum HOM05D000029 ORTHO05D003419 2.2e-06 58.2 29 79.3
MBI10_g16835_MAGBIO Magnolia biondii HOM05D000029 ORTHO05D003419 2.2e-06 58.2 28 89.3
CiPaw.03G271100 Carya illinoinensis HOM05D000029 ORTHO05D003419 2.9e-06 57.8 26 88.5
CiPaw.07G071000 Carya illinoinensis HOM05D000029 ORTHO05D003419 2.9e-06 57.8 29 82.8
DCAR_012592 Daucus carota HOM05D000029 ORTHO05D003419 2.9e-06 57.8 27 81.5
DCAR_018523 Daucus carota HOM05D000029 ORTHO05D003419 2.9e-06 57.8 27 85.2
Gohir.A07G204000 Gossypium hirsutum HOM05D000029 ORTHO05D003419 2.9e-06 57.8 28 82.1
CARHR236430 Cardamine hirsuta HOM05D000029 ORTHO05D003419 3.8e-06 57.4 28 85.7
Cfa002486 Carpinus fangiana HOM05D000029 ORTHO05D003419 3.8e-06 57.4 26 88.5
Haze_24708 Corylus avellana HOM05D000029 ORTHO05D003419 3.8e-06 57.4 26 88.5
Thhalv10024302m.g Eutrema salsugineum HOM05D000029 ORTHO05D003419 3.8e-06 57.4 29 82.8
Glyma.03G167500 Glycine max HOM05D000029 ORTHO05D003419 3.8e-06 57.4 36 66.7
Duzib138G0590 Durio zibethinus HOM05D000029 ORTHO05D003419 5.0e-06 57.0 28 82.1
Glyma.13G127100 Glycine max HOM05D000029 ORTHO05D003419 5.0e-06 57.0 26 88.5
MD10G1176300 Malus domestica HOM05D000029 ORTHO05D003419 5.0e-06 57.0 27 85.2
Potri.002G256500 Populus trichocarpa HOM05D000029 ORTHO05D003419 5.0e-06 57.0 28 82.1
Sabra13G0044900 Salix brachista HOM05D000029 ORTHO05D003419 5.0e-06 57.0 28 85.7
Manes.12G037900 Manihot esculenta HOM05D000029 ORTHO05D003419 6.5e-06 56.6 28 82.1
Potri.013G048800 Populus trichocarpa HOM05D000029 ORTHO05D003419 6.5e-06 56.6 27 88.9
Prupe.8G215300 Prunus persica HOM05D000029 ORTHO05D003419 6.5e-06 56.6 27 85.2
THA.LOC104814529 Tarenaya hassleriana HOM05D000029 ORTHO05D003419 6.5e-06 56.6 29 82.8
AL7G23890 Arabidopsis lyrata HOM05D000029 ORTHO05D003419 8.5e-06 56.2 29 79.3
AT4G28650 Arabidopsis thaliana HOM05D000029 ORTHO05D003419 8.5e-06 56.2 29 79.3
BolC1t01051H Brassica oleracea HOM05D000029 ORTHO05D003419 8.5e-06 56.2 27 88.9
ECA248G2730 Erigeron canadensis HOM05D000029 ORTHO05D003419 8.5e-06 56.2 38 65.8
Nn1g02982 Nelumbo nucifera HOM05D000029 ORTHO05D003419 8.5e-06 56.2 28 85.7
Nn3g19794 Nelumbo nucifera HOM05D000029 ORTHO05D003419 8.5e-06 56.2 27 85.2
Potri.019G021700 Populus trichocarpa HOM05D000029 ORTHO05D003419 8.5e-06 56.2 28 78.6
Rhsim01G0260400 Rhododendron simsii HOM05D000029 ORTHO05D003419 8.5e-06 56.2 28 85.7
TWI18G1401 Tripterygium wilfordii HOM05D000029 ORTHO05D003419 8.5e-06 56.2 28 82.1


User provided reference genes

Program Settings