Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 1.0e-122 443.4 218 100.0
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 3.6e-107 391.7 216 87.5
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 8.0e-107 390.6 212 87.3
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 7.5e-105 384.0 215 85.6
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 1.7e-104 382.9 216 85.6
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 2.2e-104 382.5 213 85.9
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 3.7e-104 381.7 216 84.7
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 4.9e-104 381.3 216 85.6
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 4.9e-104 381.3 215 85.1
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 4.9e-104 381.3 217 83.4
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 6.4e-104 380.9 212 87.3
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.4e-103 379.8 213 85.9
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 2.4e-103 379.0 220 83.6
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.2e-102 376.7 215 84.7
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 1.6e-102 376.3 220 83.2
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.3e-101 373.2 215 85.1
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 1.7e-101 372.9 213 81.2
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 1.7e-101 372.9 213 81.2
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 2.3e-101 372.5 213 80.8
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 2.3e-101 372.5 215 82.8
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 3.0e-101 372.1 212 83.5
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 3.0e-101 372.1 212 84.9
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 3.9e-101 371.7 215 83.7
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 5.0e-101 371.3 215 84.2
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 8.6e-101 370.5 215 83.3
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.1e-100 370.2 215 83.3
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 1.5e-100 369.8 213 80.8
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 1.5e-100 369.8 215 83.7
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 1.9e-100 369.4 213 80.8
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 4.3e-100 368.2 215 81.4
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 4.3e-100 368.2 230 79.1
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 2.1e-99 365.9 215 83.3
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 2.8e-99 365.5 215 81.9
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 4.7e-99 364.8 215 80.0
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 6.2e-99 364.4 215 81.4
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 8.0e-99 364.0 215 81.9
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 1.0e-98 363.6 215 82.3
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 1.4e-98 363.2 215 82.3
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.3e-98 362.5 211 82.0
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 4.0e-98 361.7 215 80.0
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 4.0e-98 361.7 214 80.4
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 1.2e-97 360.1 215 78.6
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 2.0e-97 359.4 213 81.7
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.0e-97 359.4 215 80.9
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 2.6e-97 359.0 215 80.9
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.4e-97 358.6 215 80.5
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 3.4e-97 358.6 213 80.8
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 4.4e-97 358.2 215 80.9
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 5.8e-97 357.8 212 79.7
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 7.5e-97 357.5 215 80.9
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 7.5e-97 357.5 215 80.0
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 2.2e-96 355.9 215 80.5
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 2.2e-96 355.9 215 80.9
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 2.2e-96 355.9 215 79.5
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 3.7e-96 355.1 213 80.3
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 6.4e-96 354.4 213 78.9
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 8.3e-96 354.0 216 78.7
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 1.1e-95 353.6 200 84.5
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 3.2e-95 352.1 208 79.3
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.1e-95 351.7 212 80.2
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.1e-95 351.7 212 80.2
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 5.4e-95 351.3 215 79.1
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 5.4e-95 351.3 204 83.3
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 7.0e-95 350.9 213 79.3
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 9.2e-95 350.5 216 79.2
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 2.0e-94 349.4 215 79.1
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 2.0e-94 349.4 215 79.5
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 2.0e-94 349.4 213 78.9
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 2.7e-94 349.0 213 77.9
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 7.8e-94 347.4 212 77.4
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 1.0e-93 347.1 215 78.1
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 1.3e-93 346.7 215 78.1
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 1.3e-93 346.7 213 77.0
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 1.7e-93 346.3 217 77.9
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 2.3e-93 345.9 213 77.5
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 3.0e-93 345.5 213 77.5
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 3.0e-93 345.5 213 77.5
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 3.0e-93 345.5 213 77.5
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 5.0e-93 344.7 213 76.5
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 5.0e-93 344.7 213 77.5
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 5.0e-93 344.7 213 77.5
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 6.6e-93 344.4 217 79.7
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 3.3e-92 342.0 215 78.6
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 9.5e-92 340.5 215 75.3
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 1.6e-91 339.7 210 77.1
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 4.7e-91 338.2 203 81.3
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 6.2e-91 337.8 201 81.6
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 7.5e-89 330.9 213 75.6
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 2.9e-88 328.9 208 76.4
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 4.1e-87 325.1 213 74.6
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.7e-85 319.7 220 72.3
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 6.6e-85 317.8 204 73.0
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 8.6e-85 317.4 215 72.6
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 1.9e-84 316.2 215 74.0
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 4.7e-83 311.6 213 74.2
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 1.1e-82 310.5 216 73.6
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 2.2e-80 302.8 190 75.8
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 1.2e-78 297.0 215 70.7
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 1.3e-77 293.5 186 75.3
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 1.1e-74 283.9 189 70.4
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 3.1e-74 282.3 181 71.3
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 8.9e-74 280.8 148 87.8
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 8.4e-72 274.2 218 63.3
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 4.6e-70 268.5 150 84.7
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 3.9e-69 265.4 148 83.8
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 3.9e-69 265.4 191 67.0
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 1.8e-66 256.5 144 84.0
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.3e-66 255.0 261 55.6
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 7.9e-62 241.1 145 80.0
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 6.7e-53 211.5 175 56.6
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 1.7e-48 196.8 189 50.3
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.9e-44 183.3 103 85.4
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 2.8e-35 152.9 185 47.6
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.6e-30 137.1 94 68.1
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 7.4e-28 128.3 66 90.9
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 3.4e-25 119.4 85 67.1
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 5.0e-24 115.5 86 65.1
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 5.5e-23 112.1 87 60.9
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.2e-22 110.9 67 79.1
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 5.3e-18 95.5 64 70.3
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 5.3e-18 95.5 143 42.0
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 1.1e-10 71.2 41 73.2
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 1.3e-08 64.3 142 30.3
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 1.7e-08 63.9 142 29.6
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 1.7e-08 63.9 142 29.6
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 3.8e-08 62.8 142 29.6
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 1.1e-07 61.2 142 29.6
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 1.1e-07 61.2 143 32.9
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 4.2e-07 59.3 142 31.0
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 4.2e-07 59.3 142 30.3
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 4.2e-07 59.3 142 30.3
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 5.5e-07 58.9 142 29.6
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 7.2e-07 58.5 142 29.6
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 7.2e-07 58.5 142 29.6
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 1.6e-06 57.4 151 28.5
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 1.6e-06 57.4 182 26.4
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 1.6e-06 57.4 142 28.2
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 1.6e-06 57.4 142 28.2
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 1.6e-06 57.4 142 30.3
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 2.7e-06 56.6 142 29.6


User provided reference genes

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