Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 8.3e-91 337.0 171 100.0
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.2e-73 280.0 171 84.2
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 6.8e-69 264.2 171 81.3
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 1.6e-65 253.1 187 71.7
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 7.3e-63 244.2 162 74.1
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 8.3e-59 230.7 173 70.5
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 7.8e-57 224.2 162 67.3
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 2.1e-54 216.1 161 66.5
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 3.6e-54 215.3 171 67.3
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 4.7e-54 214.9 162 67.3
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 4.0e-53 211.8 164 65.9
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 5.2e-53 211.5 163 66.9
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 8.9e-53 210.7 171 64.9
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 4.4e-52 208.4 171 65.5
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 4.4e-52 208.4 162 66.0
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 5.8e-52 208.0 159 66.7
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 1.3e-51 206.8 171 65.5
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.3e-51 206.8 171 64.9
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.7e-51 206.5 171 64.9
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 4.9e-51 204.9 163 66.3
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 8.3e-51 204.1 165 66.1
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 8.3e-51 204.1 163 65.6
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 2.4e-50 202.6 162 63.6
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 4.1e-50 201.8 162 65.4
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.1e-49 199.5 160 66.9
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.1e-49 199.5 160 66.9
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 4.6e-49 198.4 165 64.2
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 7.8e-49 197.6 162 67.3
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.3e-48 196.8 172 64.0
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 1.7e-48 196.4 165 63.0
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 2.3e-48 196.1 172 61.0
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.0e-48 195.7 162 61.7
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 5.6e-47 191.4 165 62.4
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 1.6e-46 189.9 158 64.6
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 1.6e-46 189.9 162 63.0
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 1.6e-46 189.9 163 63.2
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 2.1e-46 189.5 184 59.8
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 2.8e-46 189.1 163 60.1
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 2.8e-46 189.1 175 58.3
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 6.2e-46 188.0 168 62.5
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 1.1e-45 187.2 166 62.7
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 1.8e-45 186.4 171 59.6
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 3.1e-45 185.7 160 61.9
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 2.0e-44 183.0 163 62.0
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 9.9e-44 180.6 172 60.5
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.3e-43 180.3 173 59.0
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 3.8e-43 178.7 164 58.5
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 6.4e-43 177.9 128 69.5
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 8.4e-43 177.6 177 59.3
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 8.4e-43 177.6 171 57.3
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 1.1e-42 177.2 163 58.9
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.4e-42 176.8 172 59.3
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 2.4e-42 176.0 159 57.9
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.2e-42 175.3 155 60.6
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.2e-41 173.7 171 57.3
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.6e-41 173.3 145 63.4
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.7e-41 172.6 163 60.7
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 4.6e-41 171.8 162 56.8
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 6.0e-41 171.4 162 59.3
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 1.0e-40 170.6 164 57.9
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 1.0e-40 170.6 160 58.1
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.0e-40 170.6 167 58.1
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 1.7e-40 169.9 173 57.2
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 8.7e-40 167.5 163 58.9
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 1.1e-39 167.2 159 57.9
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.1e-39 167.2 179 55.9
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 1.5e-39 166.8 161 57.1
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.9e-39 166.4 164 56.1
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.3e-39 165.6 149 61.1
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 3.3e-39 165.6 149 61.1
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 5.6e-39 164.9 163 54.0
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 5.6e-39 164.9 160 58.1
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 5.6e-39 164.9 156 58.3
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 5.6e-39 164.9 162 55.6
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 7.3e-39 164.5 162 54.3
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 9.6e-39 164.1 170 54.1
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.6e-38 163.3 149 59.7
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 8.1e-38 161.0 162 58.0
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 8.1e-38 161.0 162 57.4
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 5.3e-37 158.3 164 54.9
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 9.0e-37 157.5 164 56.1
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 1.2e-36 157.1 162 53.1
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 2.0e-36 156.4 192 51.0
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 4.4e-36 155.2 147 55.8
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 4.4e-36 155.2 161 57.1
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 1.3e-35 153.7 154 53.9
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.2e-35 152.9 160 54.4
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.1e-34 150.6 162 53.1
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.4e-34 150.2 175 50.9
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.9e-34 149.8 158 53.2
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 2.4e-34 149.4 198 49.5
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 9.3e-34 147.5 156 55.1
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.6e-33 146.7 171 50.9
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.5e-33 145.6 158 53.8
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 4.6e-33 145.2 152 55.3
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 6.0e-33 144.8 158 53.8
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 8.7e-32 141.0 143 53.8
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 1.5e-31 140.2 170 50.0
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 1.5e-31 140.2 152 53.9
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 4.3e-31 138.7 150 52.0
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 5.6e-31 138.3 153 54.2
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 5.6e-31 138.3 152 53.9
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 2.1e-30 136.3 153 55.6
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 4.8e-30 135.2 153 53.6
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.8e-29 133.3 127 57.5
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 6.9e-29 131.3 153 47.1
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 9.0e-29 131.0 164 48.2
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 2.0e-28 129.8 140 50.0
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 7.6e-28 127.9 166 47.6
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 7.6e-28 127.9 163 49.7
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 7.6e-28 127.9 164 47.6
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 7.6e-28 127.9 136 53.7
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 7.6e-28 127.9 145 51.7
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 9.9e-28 127.5 163 49.7
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 9.9e-28 127.5 164 47.0
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 9.9e-28 127.5 157 46.5
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 9.9e-28 127.5 166 49.4
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 1.3e-27 127.1 163 49.7
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 3.8e-27 125.6 164 46.3
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 4.9e-27 125.2 140 48.6
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.1e-26 124.0 151 47.7
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 1.4e-26 123.6 170 46.5
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 1.9e-26 123.2 130 50.8
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 1.9e-26 123.2 166 47.0
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 2.4e-26 122.9 163 46.0
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 2.4e-26 122.9 163 46.0
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 2.4e-26 122.9 140 50.7
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 5.4e-26 121.7 174 46.0
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 9.3e-26 120.9 164 46.3
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 1.2e-25 120.6 165 46.1
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 1.2e-25 120.6 165 46.1
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 1.2e-25 120.6 131 48.9
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 1.6e-25 120.2 140 50.0
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 1.0e-24 117.5 163 46.0
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 8.7e-24 114.4 171 45.6
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 1.9e-23 113.2 160 43.1
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 3.7e-22 109.0 161 44.7
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 4.0e-21 105.5 144 46.5
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 4.0e-21 105.5 126 46.0
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 2.0e-20 103.2 68 75.0
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 3.4e-20 102.4 84 64.3
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 3.4e-20 102.4 84 64.3
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 3.4e-20 102.4 67 76.1
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 2.9e-19 99.4 152 44.1
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 6.5e-19 98.2 92 59.8
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 6.5e-19 98.2 152 43.4
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 8.4e-19 97.8 68 70.6
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 1.9e-18 96.7 150 44.0
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.5e-18 96.3 151 42.4
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.5e-18 96.3 151 42.4
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.2e-18 95.5 152 42.8
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 9.3e-18 94.4 143 44.1
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 3.9e-16 89.0 78 59.0
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 5.1e-16 88.6 76 60.5
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 8.7e-16 87.8 161 40.4
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 3.3e-15 85.9 108 48.1
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 1.6e-14 83.6 93 49.5
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 3.1e-13 79.3 89 53.9
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 9.0e-13 77.8 68 58.8
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.5e-12 77.0 142 33.1
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 3.4e-12 75.9 73 50.7
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 1.3e-11 73.9 162 34.6
Nn2g11960 Nelumbo nucifera HOM05D066638 ORTHO05D001012 1.3e-11 73.9 68 60.3
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.2e-09 67.4 76 50.0
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.2e-09 67.4 76 50.0
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 7.9e-09 64.7 76 47.4
FAN06G1571 Fragaria x ananassa HOM05D020336 ORTHO05D022570 5.7e-07 58.5 129 32.6
RcHm_v2.0_Chr1g0337361 Rosa chinensis HOM05D020336 ORTHO05D022570 7.4e-07 58.2 129 32.6
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 1.3e-06 57.4 58 56.9
DCAR_023429 Daucus carota HOM05D057861 ORTHO05D004842 1.6e-06 57.0 142 28.2
FvH4_7g07350 Fragaria vesca HOM05D020336 ORTHO05D022570 2.2e-06 56.6 129 31.8
Ciclev10023033m.g Citrus clementina HOM05D004226 ORTHO05D004842 4.8e-06 55.5 48 56.2


User provided reference genes

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