Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 0.0e+00 1374.8 679 100.0
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 0.0e+00 1085.1 679 77.9
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 7.8e-310 1066.6 691 76.7
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.2e-297 1026.2 679 74.5
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 1.2e-297 1026.2 710 71.8
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 2.0e-297 1025.4 682 73.6
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 1.7e-296 1022.3 537 87.0
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 2.9e-296 1021.5 563 84.2
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 9.3e-295 1016.5 679 73.6
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 6.0e-294 1013.8 679 73.3
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 1.0e-293 1013.1 679 73.5
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 3.0e-293 1011.5 540 86.5
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 3.0e-293 1011.5 679 72.8
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 5.6e-292 1007.3 551 84.2
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 2.1e-291 1005.4 552 84.4
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 4.8e-291 1004.2 711 72.0
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 5.8e-289 997.3 684 71.5
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 5.8e-289 997.3 662 73.7
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.3e-288 996.1 552 84.8
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 1.7e-288 995.7 551 83.3
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 1.4e-287 992.6 563 82.2
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 4.2e-287 991.1 562 82.2
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 9.3e-287 989.9 540 83.9
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 9.3e-287 989.9 543 84.2
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 1.8e-285 985.7 537 84.7
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 5.1e-285 984.2 563 80.6
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 1.3e-283 979.5 564 80.9
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 5.3e-282 974.2 622 74.8
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 6.9e-282 973.8 546 81.9
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 1.2e-281 973.0 564 80.3
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 1.2e-281 973.0 548 82.1
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 1.2e-281 973.0 688 70.2
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.5e-281 972.6 554 81.6
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 2.0e-281 972.2 545 82.8
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 3.4e-281 971.5 629 72.3
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 5.8e-281 970.7 535 82.8
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 1.7e-280 969.1 642 73.2
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 3.2e-279 964.9 561 79.3
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 3.2e-279 964.9 599 76.6
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 7.1e-279 963.8 644 72.4
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 2.1e-278 962.2 548 81.0
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 2.7e-278 961.8 577 77.1
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 6.0e-278 960.7 564 79.1
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 6.0e-278 960.7 585 77.3
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 7.9e-278 960.3 660 70.2
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 1.3e-277 959.5 602 75.2
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 5.1e-277 957.6 548 79.4
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.1e-276 956.4 548 79.7
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 1.1e-276 956.4 548 79.6
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 3.3e-276 954.9 624 73.4
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 4.3e-276 954.5 548 79.6
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 4.3e-276 954.5 548 79.4
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 4.3e-276 954.5 548 79.4
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 5.7e-276 954.1 684 71.3
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 7.4e-276 953.7 715 66.4
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 2.2e-275 952.2 677 67.9
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.1e-274 949.9 555 80.7
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 3.1e-274 948.3 555 80.5
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 4.1e-274 948.0 639 73.6
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 6.9e-274 947.2 580 77.2
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 2.6e-273 945.3 537 80.4
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 4.2e-271 937.9 547 77.7
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 1.6e-270 936.0 564 77.3
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 1.6e-270 936.0 553 77.6
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 7.9e-270 933.7 561 76.6
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 3.9e-269 931.4 687 66.5
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 3.9e-269 931.4 548 78.3
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 5.7e-268 927.5 548 79.4
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 8.2e-267 923.7 599 72.8
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 8.2e-267 923.7 612 71.2
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 2.4e-266 922.2 531 80.4
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 1.9e-263 912.5 637 71.6
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 8.8e-261 903.7 552 77.4
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 4.4e-260 901.4 514 79.2
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 1.7e-259 899.4 852 57.5
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 2.2e-259 899.0 551 75.5
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 1.1e-258 896.7 871 55.9
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 1.4e-258 896.3 556 75.9
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 7.0e-258 894.0 511 81.4
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 6.7e-253 877.5 561 73.8
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 2.2e-251 872.5 467 85.4
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 6.3e-251 870.9 468 85.9
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 5.7e-244 847.8 547 70.6
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 5.9e-241 837.8 683 63.7
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.3e-240 836.6 540 71.3
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 1.7e-240 836.3 680 62.6
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 2.0e-233 812.8 432 85.9
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 8.9e-229 797.3 556 68.2
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 7.0e-218 761.1 495 70.7
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 2.8e-198 696.0 449 74.4
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 1.4e-194 683.7 548 59.3
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 4.2e-186 655.6 369 81.3
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 7.8e-185 651.4 437 68.6
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 1.1e-175 620.9 586 55.5
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 7.6e-172 608.2 441 65.3
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 5.8e-164 582.0 559 52.1
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 2.7e-161 573.2 560 52.7
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 5.7e-159 565.5 554 50.0
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 1.7e-155 553.9 350 74.6
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 6.5e-139 498.8 438 60.5
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 1.8e-120 437.6 439 54.2
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.3e-114 416.8 277 70.8
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 3.5e-100 370.2 202 82.7
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 8.6e-99 365.5 201 80.6
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 5.1e-83 313.2 192 77.1
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 5.2e-80 303.1 186 76.3
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 2.6e-79 300.8 172 79.1
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 1.6e-76 291.6 174 77.6
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 1.5e-74 285.0 170 77.1
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.8e-54 217.2 150 67.3
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.4e-53 215.3 119 83.2
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.6e-49 201.8 106 89.6
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 2.1e-49 201.4 116 75.9
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-37 162.5 127 66.9
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 6.1e-36 156.8 127 64.6
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 4.8e-33 147.1 82 78.0
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 1.4e-32 145.6 95 73.7
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.6e-28 131.0 112 62.5
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.6e-28 131.0 112 62.5
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.6e-28 131.0 93 68.8
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 3.6e-20 104.4 78 70.5
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 1.7e-14 85.5 62 71.0
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.5e-13 81.6 59 69.5
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 5.5e-13 80.5 51 68.6
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 1.0e-11 76.3 41 87.8
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 1.2e-10 72.8 40 85.0
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 1.2e-10 72.8 40 85.0
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.8e-09 67.4 34 85.3
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 4.8e-09 67.4 53 58.5
Sp4g25500 Schrenkiella parvula HOM05D000001 ORTHO05D000003 7.7e-07 60.1 97 40.2


User provided reference genes

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