Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 1.0e-125 453.4 218 100.0
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 4.9e-88 328.2 212 74.1
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 1.1e-84 317.0 216 75.0
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 6.2e-83 311.2 215 72.1
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 6.8e-82 307.8 210 70.5
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 6.8e-82 307.8 210 70.5
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 1.5e-81 306.6 221 71.9
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 3.4e-81 305.4 216 70.4
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 3.4e-81 305.4 210 71.9
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 6.4e-80 301.2 216 70.4
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.9e-79 299.7 205 69.8
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 3.2e-79 298.9 220 69.5
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 4.1e-79 298.5 212 69.8
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 1.2e-78 297.0 218 69.3
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 2.1e-78 296.2 220 68.6
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.7e-78 295.8 217 68.2
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 3.5e-78 295.4 217 68.2
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.0e-77 293.9 215 70.2
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 2.3e-77 292.7 195 74.4
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.3e-77 292.7 217 67.7
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 1.1e-76 290.4 218 67.0
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 1.2e-75 287.0 221 63.3
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 1.6e-75 286.6 220 65.5
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 1.4e-74 283.5 215 66.0
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.8e-74 283.1 219 64.8
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 2.4e-74 282.7 221 65.2
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 2.4e-74 282.7 207 67.6
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 4.0e-74 282.0 214 66.4
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 5.2e-74 281.6 221 64.7
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 5.2e-74 281.6 221 64.7
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 8.9e-74 280.8 225 64.0
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 2.0e-73 279.6 174 75.3
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 7.6e-73 277.7 224 64.3
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 1.3e-72 276.9 174 74.7
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 2.9e-72 275.8 211 65.9
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 4.9e-72 275.0 224 62.5
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 8.4e-72 274.2 213 64.3
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 1.1e-71 273.9 218 62.4
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 2.4e-71 272.7 168 73.8
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 1.2e-70 270.4 226 60.2
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 2.1e-70 269.6 217 64.1
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 3.5e-70 268.9 218 63.3
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 3.5e-70 268.9 203 61.6
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 7.8e-70 267.7 222 60.8
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 1.0e-69 267.3 226 63.7
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 3.9e-69 265.4 206 60.7
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 5.1e-69 265.0 199 63.8
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 5.1e-69 265.0 212 63.7
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 6.6e-69 264.6 204 62.7
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 1.1e-68 263.8 213 62.0
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 1.5e-68 263.5 213 62.0
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 1.9e-68 263.1 217 59.9
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.9e-68 263.1 213 61.5
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 2.5e-68 262.7 212 61.3
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 2.5e-68 262.7 216 64.4
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 2.5e-68 262.7 214 61.7
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 3.3e-68 262.3 245 57.6
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 2.1e-67 259.6 185 66.5
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 2.8e-67 259.2 213 61.5
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.1e-66 257.3 174 70.1
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 1.4e-66 256.9 189 65.1
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 1.8e-66 256.5 210 58.1
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 2.4e-66 256.1 215 61.9
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 5.3e-66 255.0 215 61.4
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 1.2e-65 253.8 185 65.9
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 1.5e-65 253.4 211 59.7
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 1.5e-65 253.4 223 58.3
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 3.4e-65 252.3 214 58.9
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 1.3e-64 250.4 217 58.1
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 2.9e-64 249.2 217 57.6
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 2.9e-64 249.2 217 57.6
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 2.9e-64 249.2 217 57.6
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 2.9e-64 249.2 217 57.6
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 1.1e-63 247.3 217 57.1
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 1.1e-63 247.3 199 57.8
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 2.4e-63 246.1 216 56.5
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 1.6e-62 243.4 162 67.3
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 2.7e-62 242.7 193 60.1
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 3.0e-61 239.2 206 58.7
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.1e-60 237.3 206 56.8
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.9e-60 236.5 210 57.1
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 9.6e-60 234.2 210 56.2
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.1e-59 233.0 321 43.3
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 6.9e-58 228.0 192 60.4
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 3.8e-56 222.2 133 73.7
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 2.1e-54 216.5 125 74.4
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 8.4e-48 194.5 224 50.0
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 2.1e-46 189.9 104 78.8
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 2.3e-45 186.4 99 81.8
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 2.0e-41 173.3 117 69.2
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 3.4e-41 172.6 207 46.9
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 3.8e-40 169.1 98 73.5
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 2.5e-39 166.4 156 53.8
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 2.3e-37 159.8 214 50.0
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 1.6e-30 137.1 128 53.1
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 2.8e-27 126.3 142 50.0
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 3.7e-27 125.9 119 52.9
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 1.8e-26 123.6 76 72.4
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 7.2e-23 111.7 182 38.5
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 9.4e-23 111.3 132 44.7
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 4.8e-19 99.0 128 46.9
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 9.4e-15 84.7 138 39.9
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 1.2e-14 84.3 131 39.7
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.5e-12 77.4 37 89.2


User provided reference genes

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