Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0682 Trochodendron aralioides HOM05D005582 ORTHO05D007028 1.1e-62 243.0 120 100.0
Nn4g25411 Nelumbo nucifera HOM05D005582 ORTHO05D007028 1.1e-25 120.2 115 60.0
GSVIVG01017603001 Vitis vinifera HOM05D005582 ORTHO05D007028 3.6e-24 115.2 106 60.4
GSVIVG01017662001 Vitis vinifera HOM05D005582 ORTHO05D007028 3.6e-24 115.2 106 60.4
QL06p013845 Quercus lobata HOM05D005582 ORTHO05D007028 3.0e-23 112.1 117 56.4
QL93p1872_0012 Quercus lobata HOM05D005582 ORTHO05D007028 3.0e-23 112.1 117 56.4
Dinv29525 Davidia involucrata HOM05D005582 ORTHO05D007028 1.5e-22 109.8 116 52.6
Atru.chr11.54 Acer truncatum HOM05D005582 ORTHO05D007028 5.7e-22 107.8 113 49.6
Ciclev10004134m.g Citrus clementina HOM05D005582 ORTHO05D007028 5.7e-22 107.8 108 52.8
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 5.7e-22 107.8 112 53.6
PSO170G3214 Papaver somniferum HOM05D005582 ORTHO05D007028 9.7e-22 107.1 107 53.3
Aqoxy5G02775 Aquilegia oxysepala HOM05D005582 ORTHO05D007028 1.7e-21 106.3 109 54.1
Cfa015717 Carpinus fangiana HOM05D005582 ORTHO05D007028 2.2e-21 105.9 112 52.7
CSS0025323 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 6.3e-21 104.4 114 52.6
CiPaw.02G071000 Carya illinoinensis HOM05D005582 ORTHO05D007028 2.4e-20 102.4 114 50.0
Potri.010G153300 Populus trichocarpa HOM05D005582 ORTHO05D007028 3.1e-20 102.1 115 47.0
Rhsim04G0247200 Rhododendron simsii HOM05D005582 ORTHO05D007028 9.1e-20 100.5 116 50.0
MD13G1143700 Malus domestica HOM05D005582 ORTHO05D007028 4.5e-19 98.2 108 50.9
Sabra10G0117900 Salix brachista HOM05D005582 ORTHO05D007028 4.5e-19 98.2 116 45.7
Lj3C839G18 Lonicera japonica HOM05D005582 ORTHO05D007028 8.5e-18 94.0 118 47.5
vmacro08001 Vaccinium macrocarpon HOM05D005582 ORTHO05D007028 2.5e-17 92.4 110 48.2
Manes.15G004000 Manihot esculenta HOM05D005582 ORTHO05D007028 4.2e-17 91.7 116 45.7
Gorai.006G081300 Gossypium raimondii HOM05D005582 ORTHO05D007028 5.5e-17 91.3 112 45.5
Prupe.1G108200 Prunus persica HOM05D005582 ORTHO05D007028 7.2e-17 90.9 115 43.5
Cpa.g.sc146.39 Carica papaya HOM05D005582 ORTHO05D007028 2.1e-16 89.4 115 44.3
Duzib151G1162 Durio zibethinus HOM05D005582 ORTHO05D007028 4.7e-16 88.2 111 46.8
TWI53G0357 Tripterygium wilfordii HOM05D005582 ORTHO05D007028 8.0e-16 87.4 115 42.6
CANSAT01G1159 Cannabis sativa HOM05D005582 ORTHO05D007028 1.0e-15 87.0 113 46.9
FvH4_4g21250 Fragaria vesca HOM05D005582 ORTHO05D007028 1.4e-15 86.7 114 44.7
FAN12G2136 Fragaria x ananassa HOM05D005582 ORTHO05D007028 1.4e-15 86.7 114 44.7
COL.COLO4_34544 Corchorus olitorius HOM05D005582 ORTHO05D007028 1.8e-15 86.3 112 45.5
Gohir.A09G067200 Gossypium hirsutum HOM05D005582 ORTHO05D007028 1.8e-15 86.3 113 44.2
Gohir.D09G066800 Gossypium hirsutum HOM05D005582 ORTHO05D007028 6.8e-15 84.3 111 42.3
Thecc.04G310500 Theobroma cacao HOM05D005582 ORTHO05D007028 8.8e-15 84.0 112 43.8
VMungo0720G3059 Vigna mungo HOM05D005582 ORTHO05D007028 8.8e-15 84.0 113 41.6
Phvul.007G062300 Phaseolus vulgaris HOM05D005582 ORTHO05D007028 1.2e-14 83.6 113 42.5
RcHm_v2.0_Chr4g0426871 Rosa chinensis HOM05D005582 ORTHO05D007028 3.4e-14 82.0 110 41.8
FAN07G0038 Fragaria x ananassa HOM05D005582 ORTHO05D007028 9.8e-14 80.5 114 43.0
Lj5g0009067 Lotus japonicus HOM05D005582 ORTHO05D007028 1.7e-13 79.7 113 39.8
Lalb_Chr06g0160761 Lupinus albus HOM05D005582 ORTHO05D007028 1.7e-13 79.7 111 40.5
PGR031G2985 Punica granatum HOM05D005582 ORTHO05D007028 4.8e-13 78.2 108 43.5
Glyma.10G243400 Glycine max HOM05D005582 ORTHO05D007028 6.3e-13 77.8 106 43.4
Glyma.20G150800 Glycine max HOM05D005582 ORTHO05D007028 6.3e-13 77.8 113 40.7
DCAR_023392 Daucus carota HOM05D005582 ORTHO05D007028 3.1e-12 75.5 116 43.1
Psat6g203520 Pisum sativum HOM05D005582 ORTHO05D007028 9.1e-12 73.9 113 39.8
Cc03_g00260 Coffea canephora HOM05D005582 ORTHO05D007028 1.6e-11 73.2 99 43.4
Eucgr.B02209 Eucalyptus grandis HOM05D005582 ORTHO05D007028 1.6e-11 73.2 101 42.6
Thhalv10012423m.g Eutrema salsugineum HOM05D005582 ORTHO05D007028 3.5e-11 72.0 115 39.1
Medtr1g102710 Medicago truncatula HOM05D005582 ORTHO05D007028 4.5e-11 71.6 113 38.1
Sc25g0001750 Simmondsia chinensis HOM05D005582 ORTHO05D007028 4.5e-11 71.6 108 38.9
CARHR194490 Cardamine hirsuta HOM05D005582 ORTHO05D007028 5.9e-11 71.2 115 37.4
Ca_10845_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 7.7e-11 70.9 113 38.1
Ca_10846_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 7.7e-11 70.9 113 38.1
Sp6g25800 Schrenkiella parvula HOM05D005582 ORTHO05D007028 7.7e-11 70.9 115 38.3
Aa31LG11G11190 Aethionema arabicum HOM05D005582 ORTHO05D007028 1.0e-10 70.5 115 38.3
EL10Ac3g06266 Beta vulgaris HOM05D005582 ORTHO05D007028 1.7e-10 69.7 106 39.6
BraA10t44167Z Brassica rapa HOM05D005582 ORTHO05D007028 2.3e-10 69.3 111 40.5
TPR.G26104 Trifolium pratense HOM05D005582 ORTHO05D007028 2.3e-10 69.3 113 38.9
BcaC04g18671 Brassica carinata HOM05D005582 ORTHO05D007028 2.9e-10 68.9 111 40.5
A10p21030 Brassica napus HOM05D005582 ORTHO05D007028 2.9e-10 68.9 111 40.5
C09p57960 Brassica napus HOM05D005582 ORTHO05D007028 2.9e-10 68.9 111 40.5
BolC9t58663H Brassica oleracea HOM05D005582 ORTHO05D007028 2.9e-10 68.9 111 40.5
ECA246G0223 Erigeron canadensis HOM05D005582 ORTHO05D007028 3.8e-10 68.6 103 39.8
Oeu022697.1 Olea europaea HOM05D005582 ORTHO05D007028 5.0e-10 68.2 94 41.5
Sopen12g033750 Solanum pennellii HOM05D005582 ORTHO05D007028 5.0e-10 68.2 114 38.6
ATR0796G139 Amborella trichopoda HOM05D005582 ORTHO05D007028 8.6e-10 67.4 96 40.6
BcaB08g36665 Brassica carinata HOM05D005582 ORTHO05D007028 8.6e-10 67.4 111 39.6
AUR62002565 Chenopodium quinoa HOM05D005582 ORTHO05D007028 1.1e-09 67.0 109 35.8
Nitab4.5_0000895g0160 Nicotiana tabacum HOM05D005582 ORTHO05D007028 1.5e-09 66.6 105 40.0
Nitab4.5_0004665g0020 Nicotiana tabacum HOM05D005582 ORTHO05D007028 1.5e-09 66.6 104 40.4
AT5G18525 Arabidopsis thaliana HOM05D005582 ORTHO05D007028 1.9e-09 66.2 115 38.3
Migut.N00012 Erythranthe guttata HOM05D005582 ORTHO05D007028 1.9e-09 66.2 102 41.2
AL6G29800 Arabidopsis lyrata HOM05D005582 ORTHO05D007028 2.5e-09 65.9 115 37.4
Sed0007110 Sechium edule HOM05D005582 ORTHO05D007028 2.5e-09 65.9 118 39.0
AUR62029987 Chenopodium quinoa HOM05D005582 ORTHO05D007028 3.3e-09 65.5 109 36.7
Lsat_1_v5_gn_6_117861 Lactuca sativa HOM05D001037 ORTHO05D007028 4.2e-09 65.1 106 44.3
Carub.0006s1680 Capsella rubella HOM05D005582 ORTHO05D007028 1.2e-08 63.5 115 37.4
arahy.Tifrunner.gnm1.ann1.ZZ97E1 Arachis hypogaea HOM05D005582 ORTHO05D007028 1.6e-08 63.2 111 36.9
CSS0001073 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 2.8e-08 62.4 113 37.2
CAN.G484.83 Capsicum annuum HOM05D005582 ORTHO05D007028 2.8e-08 62.4 102 40.2
HPP92_015254 Vanilla planifolia HOM05D005582 ORTHO05D007028 8.0e-08 60.8 103 33.0
arahy.Tifrunner.gnm1.ann1.6ZCT8S Arachis hypogaea HOM05D005582 ORTHO05D007028 1.0e-07 60.5 112 35.7
SalBow5G3991 Salvia bowleyana HOM05D005582 ORTHO05D007028 1.4e-07 60.1 100 40.0
Ah.07g203770 Amaranthus hybridus HOM05D005582 ORTHO05D007028 1.8e-07 59.7 98 39.8
SGA_v2.0_scaffold227G43203 Striga asiatica HOM05D005582 ORTHO05D007028 1.8e-07 59.7 104 37.5
THA.LOC104818852 Tarenaya hassleriana HOM05D005582 ORTHO05D007028 6.8e-07 57.8 113 38.1
MSTRG.19398 Avicennia marina HOM05D005582 ORTHO05D007028 8.9e-07 57.4 110 33.6
HPP92_010030 Vanilla planifolia HOM05D005582 ORTHO05D007028 8.9e-07 57.4 103 32.0
Hund12246 Selenicereus undatus HOM05D005582 ORTHO05D007028 1.2e-06 57.0 108 37.0
Zm00001eb131030 Zea mays HOM05D005582 ORTHO05D007028 1.2e-06 57.0 101 36.6
Peaxi162Scf01194g00137 Petunia axillaris HOM05D005582 ORTHO05D007028 2.0e-06 56.2 106 34.0
BcaB08g36668 Brassica carinata HOM05D005582 ORTHO05D007028 7.5e-06 54.3 98 37.8
HanXRQChr05g0148391 Helianthus annuus HOM05D005582 ORTHO05D007028 7.5e-06 54.3 110 34.5


User provided reference genes

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