Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 5.4e-116 421.0 213 100.0
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 8.1e-88 327.4 170 97.6
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 1.1e-87 327.0 170 97.1
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.4e-87 326.6 170 97.1
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.4e-87 326.6 170 97.1
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.4e-87 325.9 170 95.9
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 3.1e-87 325.5 170 97.1
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 3.1e-87 325.5 170 95.9
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 3.1e-87 325.5 170 95.9
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 4.0e-87 325.1 170 96.5
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 4.0e-87 325.1 169 97.0
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 6.9e-87 324.3 170 97.1
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 9.0e-87 323.9 170 95.9
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 2.0e-86 322.8 170 95.9
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 2.0e-86 322.8 170 95.3
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 2.0e-86 322.8 170 95.3
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 2.0e-86 322.8 170 95.3
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 2.6e-86 322.4 170 95.3
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 3.4e-86 322.0 170 94.7
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 3.4e-86 322.0 170 96.5
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 4.5e-86 321.6 170 94.7
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 4.5e-86 321.6 170 95.9
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 4.5e-86 321.6 170 95.3
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 5.8e-86 321.2 170 94.7
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 7.6e-86 320.9 175 90.3
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 7.6e-86 320.9 170 93.5
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 7.6e-86 320.9 170 94.1
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 7.6e-86 320.9 170 95.3
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.0e-85 320.5 169 95.3
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 1.3e-85 320.1 170 94.7
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.3e-85 320.1 170 94.7
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.7e-85 319.7 170 94.7
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.7e-85 319.7 170 94.7
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 2.2e-85 319.3 170 94.7
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 2.2e-85 319.3 170 94.7
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 3.8e-85 318.5 169 94.7
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 6.5e-85 317.8 170 93.5
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 6.5e-85 317.8 170 93.5
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 6.5e-85 317.8 168 94.6
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 6.5e-85 317.8 168 94.6
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 6.5e-85 317.8 168 94.6
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 6.5e-85 317.8 170 94.1
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 8.4e-85 317.4 170 93.5
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 8.4e-85 317.4 170 94.1
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 1.1e-84 317.0 170 93.5
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 1.1e-84 317.0 178 89.3
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 1.1e-84 317.0 170 93.5
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.4e-84 316.6 170 93.5
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.9e-84 316.2 176 92.6
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 2.5e-84 315.8 170 93.5
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 4.2e-84 315.1 170 92.4
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 4.2e-84 315.1 170 92.4
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 5.5e-84 314.7 170 92.4
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 5.5e-84 314.7 170 92.4
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 5.5e-84 314.7 170 92.4
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 5.5e-84 314.7 167 95.2
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 7.1e-84 314.3 167 95.2
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 1.2e-83 313.5 170 92.4
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 1.6e-83 313.2 170 91.8
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 2.1e-83 312.8 170 92.4
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.0e-82 310.5 183 88.0
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 3.9e-82 308.5 183 87.4
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 5.1e-82 308.1 208 78.8
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.1e-81 307.0 170 92.9
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.1e-81 307.0 166 91.0
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.5e-81 306.6 190 85.8
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.9e-81 306.2 170 89.4
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 2.5e-81 305.8 169 92.3
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 4.3e-81 305.1 170 91.2
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 2.1e-80 302.8 169 91.1
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 3.1e-79 298.9 157 94.3
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 2.0e-78 296.2 168 88.1
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 5.8e-78 294.7 168 88.7
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 5.8e-78 294.7 168 86.9
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 2.2e-77 292.7 167 86.8
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.8e-77 292.0 179 87.2
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 3.2e-76 288.9 162 90.7
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 2.1e-75 286.2 151 94.7
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 3.5e-75 285.4 151 94.7
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 6.1e-75 284.6 164 87.2
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 2.3e-74 282.7 150 94.0
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 3.9e-74 282.0 147 95.9
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.7e-73 278.1 147 94.6
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 1.8e-71 273.1 171 76.6
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 3.1e-71 272.3 140 97.1
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 4.1e-71 271.9 147 92.5
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.6e-70 269.2 140 95.0
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 7.7e-70 267.7 139 96.4
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 1.3e-69 266.9 147 91.2
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.1e-68 263.8 147 89.8
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 2.5e-68 262.7 170 81.2
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 7.9e-67 257.7 262 58.4
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.5e-65 253.4 164 80.5
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.2e-64 249.6 175 76.0
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 4.8e-64 248.4 170 78.8
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.1e-63 247.3 170 79.4
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 2.6e-62 242.7 128 94.5
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 5.9e-62 241.5 130 93.8
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 2.3e-58 229.6 229 61.1
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 2.3e-58 229.6 125 94.4
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.1e-57 227.3 120 95.8
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.1e-57 227.3 120 95.8
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 3.3e-57 225.7 233 58.4
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 4.4e-57 225.3 129 87.6
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 9.4e-52 207.6 169 62.1
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 9.4e-52 207.6 109 97.2
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 2.1e-51 206.5 110 94.5
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 7.2e-44 181.4 115 80.9
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 5.2e-42 175.3 176 51.1
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 7.5e-41 171.4 171 58.5
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 2.0e-33 146.7 117 66.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 3.4e-33 146.0 76 94.7
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 2.2e-32 143.3 75 93.3
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 4.9e-32 142.1 75 92.0
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 9.8e-25 117.9 73 76.7
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 3.7e-24 115.9 60 93.3
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 2.4e-23 113.2 60 96.7
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 2.8e-19 99.8 50 96.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.0e-13 79.0 38 92.1
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.4e-10 70.9 39 84.6
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 9.2e-07 58.2 59 55.9


User provided reference genes

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