Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 1.9e-59 232.3 113 100.0
TAR365G0599 Trochodendron aralioides HOM05D008155 ORTHO05D010411 5.4e-30 134.4 114 59.6
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 1.7e-23 112.8 97 56.7
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 1.9e-19 99.4 141 40.4
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 2.5e-19 99.0 115 48.7
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 1.8e-17 92.8 105 47.6
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 5.2e-17 91.3 113 44.2
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 6.8e-17 90.9 109 46.8
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 8.9e-17 90.5 109 46.8
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 7.5e-16 87.4 113 45.1
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 1.7e-15 86.3 95 47.4
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 2.2e-15 85.9 90 52.2
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 4.9e-15 84.7 121 43.8
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 5.4e-14 81.3 92 42.4
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 7.0e-14 80.9 125 41.6
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 7.0e-14 80.9 108 45.4
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 1.6e-13 79.7 109 38.5
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 3.5e-13 78.6 114 39.5
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 4.6e-13 78.2 108 39.8
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 2.3e-12 75.9 114 42.1
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 5.0e-12 74.7 127 37.0
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 8.6e-12 73.9 110 41.8
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 8.6e-12 73.9 66 53.0
Potri.005G001100 Populus trichocarpa HOM05D008155 ORTHO05D010411 1.1e-11 73.6 105 36.2
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 1.5e-11 73.2 133 33.8
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 1.9e-11 72.8 107 42.1
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.5e-11 72.4 129 38.8
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.5e-11 72.4 129 38.8
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 3.3e-11 72.0 107 41.1
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 1.2e-10 70.1 55 52.7
Atru.chr12.1502 Acer truncatum HOM05D008155 ORTHO05D010411 4.7e-10 68.2 110 39.1
Ah.03g147790 Amaranthus hybridus HOM05D008155 ORTHO05D010411 4.7e-10 68.2 114 32.5
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 8.1e-10 67.4 126 40.5
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 1.4e-09 66.6 91 44.0
COL.COLO4_05473 Corchorus olitorius HOM05D008155 ORTHO05D010411 2.3e-09 65.9 92 43.5
Lsat_1_v5_gn_1_75801 Lactuca sativa HOM05D008155 ORTHO05D010411 4.0e-09 65.1 97 36.1
ClCG02G014570 Citrullus lanatus HOM05D008155 ORTHO05D010411 5.2e-09 64.7 122 38.5
Lsat_1_v5_gn_5_146861 Lactuca sativa HOM05D008155 ORTHO05D010411 5.2e-09 64.7 114 36.0
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 6.8e-09 64.3 52 48.1
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 8.9e-09 63.9 98 36.7
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 1.2e-08 63.5 129 31.8
EL10Ac6g15313 Beta vulgaris HOM05D008155 ORTHO05D010411 1.5e-08 63.2 97 36.1
DCAR_022333 Daucus carota HOM05D008155 ORTHO05D010411 2.6e-08 62.4 92 32.6
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 2.6e-08 62.4 42 61.9
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 3.4e-08 62.0 92 38.0
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 7.5e-08 60.8 61 42.6
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 7.5e-08 60.8 52 46.2
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 9.9e-08 60.5 127 34.6
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 9.9e-08 60.5 128 34.4
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 9.9e-08 60.5 122 36.9
Rhsim11G0107200 Rhododendron simsii HOM05D008155 ORTHO05D010411 1.7e-07 59.7 55 50.9
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 2.9e-07 58.9 98 35.7
Sed0026568 Sechium edule HOM05D008155 ORTHO05D010411 3.7e-07 58.5 111 35.1
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 3.7e-07 58.5 51 45.1
Sc03g0006010 Simmondsia chinensis HOM05D008155 ORTHO05D010411 4.9e-07 58.2 100 37.0
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 8.3e-07 57.4 133 33.1
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 1.1e-06 57.0 126 30.2
unitig_747.g21289 Utricularia gibba HOM05D008155 ORTHO05D010411 1.9e-06 56.2 87 40.2
unitig_699.g19831 Utricularia gibba HOM05D008155 ORTHO05D010411 9.2e-06 53.9 59 42.4


User provided reference genes

Program Settings