Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 7.9e-109 397.1 201 100.0
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 7.2e-62 241.1 193 66.3
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 2.9e-55 219.2 179 65.4
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 6.6e-55 218.0 202 62.4
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 8.0e-53 211.1 195 58.5
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.8e-52 209.9 178 65.2
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 2.3e-52 209.5 180 63.9
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.5e-51 206.8 194 58.2
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.5e-51 206.8 193 57.5
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 2.6e-51 206.1 178 64.0
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 2.2e-50 203.0 154 66.9
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 3.7e-50 202.2 166 63.3
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 8.3e-50 201.1 185 59.5
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.4e-49 200.3 178 60.1
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.2e-49 199.1 202 55.9
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 5.4e-49 198.4 186 59.7
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 2.0e-48 196.4 177 60.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 2.0e-48 196.4 189 59.8
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.5e-48 195.7 182 57.7
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 6.0e-48 194.9 173 60.1
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 7.8e-48 194.5 179 61.5
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 7.8e-48 194.5 179 58.7
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.7e-47 193.4 176 60.2
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.0e-47 192.6 151 64.2
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 5.0e-47 191.8 182 57.7
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 6.6e-47 191.4 178 59.0
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 2.5e-46 189.5 181 58.6
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 9.5e-46 187.6 173 59.5
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 2.1e-45 186.4 150 64.0
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 3.6e-45 185.7 182 56.0
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 6.2e-45 184.9 178 59.6
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 1.4e-44 183.7 183 56.8
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 1.4e-44 183.7 183 56.3
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 2.3e-44 183.0 150 62.7
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 5.2e-44 181.8 182 54.9
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 6.8e-44 181.4 150 62.0
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 6.8e-44 181.4 174 58.0
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 8.9e-44 181.0 183 54.1
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.2e-43 180.6 177 57.1
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.0e-43 179.9 178 56.7
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 2.0e-43 179.9 178 56.7
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 4.4e-43 178.7 179 54.7
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 5.8e-43 178.3 154 63.0
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 7.5e-43 177.9 173 56.1
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 1.3e-42 177.2 184 53.3
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.7e-42 176.8 182 56.0
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.2e-42 176.4 178 55.6
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.7e-42 175.6 188 53.7
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 8.3e-42 174.5 172 55.2
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.1e-41 174.1 157 57.3
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.4e-41 173.7 185 54.1
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.4e-41 173.7 186 52.2
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 4.1e-41 172.2 192 53.1
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.1e-41 172.2 188 52.7
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 7.0e-41 171.4 179 54.2
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 9.2e-41 171.0 203 53.2
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 2.7e-40 169.5 172 55.2
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 2.7e-40 169.5 178 50.0
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 6.0e-40 168.3 185 47.6
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 1.0e-39 167.5 186 48.9
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.0e-39 167.5 161 57.8
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.0e-39 167.5 180 51.1
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.3e-39 166.4 158 52.5
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 2.3e-39 166.4 182 49.5
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.9e-39 165.6 188 51.6
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 3.9e-39 165.6 127 68.5
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 6.6e-39 164.9 153 55.6
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 8.6e-39 164.5 161 57.1
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.5e-38 163.7 159 57.2
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.9e-38 163.3 178 52.2
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 3.3e-38 162.5 115 69.6
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 9.5e-38 161.0 166 54.2
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 2.1e-37 159.8 172 54.7
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 2.1e-37 159.8 136 64.0
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 2.8e-37 159.5 161 55.3
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 3.6e-37 159.1 181 53.0
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 6.2e-37 158.3 173 53.8
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.1e-36 157.5 160 50.6
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 1.1e-36 157.5 167 49.7
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.3e-36 156.4 155 51.0
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.3e-36 156.4 158 49.4
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 4.0e-36 155.6 165 48.5
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 5.2e-36 155.2 155 51.0
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 5.2e-36 155.2 167 49.1
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.2e-35 154.1 155 51.0
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 3.4e-35 152.5 155 49.0
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 5.8e-35 151.8 151 51.7
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 7.5e-35 151.4 155 53.5
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 9.9e-35 151.0 167 47.9
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 2.2e-34 149.8 155 49.0
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.2e-34 149.8 155 48.4
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.2e-34 149.8 155 48.4
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 4.9e-34 148.7 158 48.7
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 6.4e-34 148.3 166 53.0
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 8.3e-34 147.9 159 48.4
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.9e-33 146.7 188 43.1
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 5.4e-33 145.2 128 58.6
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 9.2e-33 144.4 136 56.6
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 3.5e-32 142.5 126 58.7
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 7.8e-32 141.4 174 48.9
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 1.7e-31 140.2 156 51.9
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 4.3e-30 135.6 204 41.2
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.2e-27 127.5 117 57.3
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 8.4e-26 121.3 166 44.0
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 9.2e-25 117.9 116 50.0
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.6e-24 117.1 113 54.9
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 3.1e-20 102.8 92 52.2
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 2.6e-19 99.8 73 64.4
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 9.6e-14 81.3 78 57.7
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 3.4e-11 72.8 128 35.2
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.8e-10 69.3 109 43.1
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 7.1e-09 65.1 181 32.0
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.1e-06 57.8 36 66.7


User provided reference genes

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