Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 3.8e-252 874.4 450 100.0
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 1.3e-188 663.3 448 73.9
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 6.8e-185 651.0 448 75.4
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 3.4e-184 648.7 448 73.9
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 6.4e-183 644.4 448 72.8
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 1.3e-180 636.7 448 73.0
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 3.3e-179 632.1 487 68.4
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 1.1e-177 627.1 448 73.4
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 7.5e-176 620.9 452 73.0
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 9.8e-176 620.5 449 71.9
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 9.8e-176 620.5 452 73.0
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 1.3e-175 620.2 448 70.8
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 2.2e-175 619.4 452 73.0
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 8.3e-175 617.5 448 70.8
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 1.4e-174 616.7 448 69.9
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 2.4e-174 615.9 448 69.4
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 3.2e-174 615.5 428 73.6
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 3.0e-172 609.0 451 72.3
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 8.1e-170 600.9 448 69.0
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 5.8e-168 594.7 454 68.1
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 1.9e-166 589.7 448 70.3
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 1.3e-164 583.6 458 67.7
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 3.0e-164 582.4 449 68.2
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 1.1e-163 580.5 449 69.3
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 1.1e-163 580.5 452 66.8
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 3.3e-163 578.9 467 64.2
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 3.3e-163 578.9 448 65.4
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 1.2e-162 577.0 449 66.1
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 2.1e-162 576.2 448 67.0
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 2.1e-162 576.2 449 68.6
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 2.1e-162 576.2 450 66.9
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 3.6e-162 575.5 448 67.6
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 1.1e-161 573.9 452 64.6
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 2.4e-161 572.8 451 66.7
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 1.5e-160 570.1 448 65.8
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.0e-160 569.7 448 66.1
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 1.3e-159 567.0 428 67.1
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.3e-159 567.0 449 67.0
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.9e-159 565.8 448 65.4
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 3.8e-159 565.5 474 62.0
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 4.9e-159 565.1 407 70.8
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.1e-158 563.9 428 66.8
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 2.4e-158 562.8 452 66.6
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 2.4e-158 562.8 449 66.4
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 9.2e-158 560.8 341 81.5
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 1.2e-157 560.5 450 64.4
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 6.0e-157 558.1 449 66.1
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 1.0e-156 557.4 448 64.7
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 1.5e-155 553.5 452 63.9
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 1.9e-155 553.1 448 64.5
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 2.5e-155 552.7 457 66.1
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 4.3e-155 552.0 341 80.4
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 4.3e-155 552.0 448 64.3
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 5.6e-155 551.6 450 63.6
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 6.2e-154 548.1 451 64.1
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 6.2e-154 548.1 450 64.2
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 8.1e-154 547.7 449 64.4
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 1.4e-153 547.0 451 65.4
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 4.0e-153 545.4 448 64.7
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 4.0e-153 545.4 415 69.2
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 6.9e-153 544.7 449 64.4
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 6.9e-153 544.7 449 63.0
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 6.9e-153 544.7 448 62.9
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 9.0e-153 544.3 450 65.3
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 1.2e-152 543.9 450 63.3
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 2.2e-151 539.7 450 62.9
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 6.4e-151 538.1 449 65.3
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.2e-149 533.9 459 64.5
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 7.8e-149 531.2 451 62.3
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 1.0e-148 530.8 448 61.6
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 2.3e-148 529.6 448 62.7
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 5.1e-148 528.5 389 69.7
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 3.3e-147 525.8 405 66.4
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 3.3e-147 525.8 385 70.1
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 7.3e-147 524.6 451 63.0
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 1.6e-146 523.5 467 60.6
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 1.6e-146 523.5 341 76.5
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 4.8e-146 521.9 476 59.9
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 4.0e-145 518.8 450 63.8
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 1.5e-144 516.9 337 76.6
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.1e-142 510.8 393 67.4
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 1.4e-142 510.4 472 60.4
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 9.3e-142 507.7 501 58.7
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 1.1e-139 500.7 448 58.7
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 7.4e-139 498.0 405 65.4
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 5.3e-137 491.9 342 70.5
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 1.2e-136 490.7 366 71.0
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 2.2e-135 486.5 471 59.0
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 4.9e-135 485.3 459 59.7
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 6.4e-135 485.0 454 58.6
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 7.1e-134 481.5 454 58.8
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 1.6e-133 480.3 460 57.8
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 5.7e-123 445.3 479 50.7
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 4.8e-122 442.2 303 73.9
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.2e-120 437.6 391 60.1
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 2.2e-119 433.3 256 81.6
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.4e-118 430.6 380 60.3
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 9.4e-118 427.9 361 62.9
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 3.6e-117 426.0 464 53.4
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 4.3e-115 419.1 383 59.8
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 7.9e-109 398.3 379 54.6
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.9e-109 398.3 254 76.0
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.1e-107 394.4 256 72.7
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 3.8e-103 379.4 351 55.8
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 4.2e-102 375.9 343 55.4
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 5.5e-102 375.6 353 61.5
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 8.0e-101 371.7 257 70.0
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 9.1e-97 358.2 364 49.2
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 1.7e-95 354.0 367 49.6
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.8e-95 352.8 405 51.6
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 1.7e-90 337.4 301 61.1
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 2.0e-88 330.5 387 46.8
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 4.5e-88 329.3 243 65.4
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 1.2e-83 314.7 337 53.1
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 5.9e-80 302.4 450 45.8
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 8.3e-74 282.0 395 45.3
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 5.6e-54 216.1 262 46.9
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 5.2e-52 209.5 164 62.2
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 5.8e-51 206.1 235 52.8
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 2.3e-47 194.1 189 58.2
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 2.6e-43 180.6 297 40.4
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 1.5e-35 154.8 137 65.7
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 2.6e-35 154.1 122 63.9
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 3.8e-34 150.2 196 51.0
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 4.2e-33 146.7 93 69.9
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 4.2e-33 146.7 134 64.2
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 7.1e-33 146.0 350 31.1
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 6.0e-24 116.3 191 35.1
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.3e-23 115.2 60 83.3
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.0e-23 114.0 126 49.2
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.6e-16 91.7 151 44.4
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 6.0e-16 89.7 74 63.5
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 1.0e-07 62.4 142 38.7


User provided reference genes

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