Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 8.2e-238 826.6 410 100.0
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 2.7e-172 609.0 413 73.4
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 1.4e-168 596.7 423 68.6
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 1.5e-167 593.2 420 68.3
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.7e-166 589.7 430 68.1
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 6.4e-166 587.8 403 70.5
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 6.4e-166 587.8 425 68.2
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 1.4e-165 586.6 419 71.6
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 1.9e-165 586.3 438 68.0
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.2e-164 583.6 426 67.6
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 7.9e-164 580.9 425 67.8
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 3.3e-162 575.5 424 67.7
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 9.6e-162 573.9 414 68.6
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 1.1e-160 570.5 418 67.5
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 4.0e-160 568.5 421 68.4
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 5.3e-160 568.2 409 68.0
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 1.2e-159 567.0 427 67.0
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 5.8e-159 564.7 425 67.5
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 5.8e-159 564.7 417 68.3
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.0e-158 563.9 427 67.9
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 1.0e-158 563.9 420 67.1
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 1.3e-158 563.5 415 67.0
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 2.2e-158 562.8 429 66.9
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.9e-157 559.7 430 64.9
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 7.1e-157 557.8 428 66.8
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 1.2e-156 557.0 415 67.7
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 7.9e-156 554.3 413 66.3
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 8.7e-155 550.8 422 67.1
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 1.3e-153 547.0 402 70.6
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 2.8e-153 545.8 410 65.1
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 1.1e-152 543.9 408 66.4
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.4e-152 543.5 389 69.2
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 1.8e-152 543.1 434 65.4
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 4.0e-152 542.0 400 67.2
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 6.9e-152 541.2 452 61.5
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 6.9e-152 541.2 416 65.4
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 3.4e-151 538.9 380 68.4
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 3.4e-151 538.9 403 69.5
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 1.3e-150 537.0 428 64.3
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 2.2e-150 536.2 398 69.6
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 7.1e-149 531.2 402 66.9
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 9.3e-149 530.8 408 63.5
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 9.3e-149 530.8 357 72.5
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 1.6e-148 530.0 374 69.0
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 3.5e-148 528.9 389 68.6
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 3.9e-147 525.4 401 68.1
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.9e-146 523.1 398 64.6
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 4.3e-146 521.9 422 63.3
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 5.7e-146 521.5 379 67.0
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 9.7e-146 520.8 360 70.3
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 2.2e-145 519.6 398 64.6
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 3.1e-144 515.8 390 64.9
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 2.0e-138 496.5 408 60.8
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 3.1e-136 489.2 406 63.1
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 4.5e-135 485.3 390 62.8
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 5.9e-135 485.0 409 59.4
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 9.4e-133 477.6 375 63.7
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 1.4e-131 473.8 342 68.1
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 3.3e-130 469.2 385 61.8
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 5.7e-130 468.4 329 68.7
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 3.7e-129 465.7 376 62.8
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.8e-128 463.4 414 57.0
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 2.6e-127 459.5 419 58.5
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 3.2e-125 452.6 424 57.5
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.3e-121 440.7 431 56.8
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 2.4e-120 436.4 294 71.1
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 5.5e-117 425.2 407 54.3
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 1.1e-112 411.0 313 67.7
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 3.5e-111 406.0 378 56.3
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.8e-110 402.5 305 65.2
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 3.8e-110 402.5 277 70.0
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 2.6e-106 389.8 336 60.4
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 2.8e-100 369.8 291 62.9
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 5.7e-98 362.1 420 47.6
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 2.9e-97 359.8 436 49.1
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 8.9e-91 338.2 344 51.2
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.6e-90 336.7 299 54.8
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 5.4e-88 328.9 379 46.4
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 7.5e-82 308.5 295 54.6
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.4e-80 304.3 198 74.2
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 2.1e-79 300.4 205 70.2
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.5e-77 294.3 211 66.8
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 1.1e-72 278.1 376 42.8
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 7.3e-69 265.4 413 40.2
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.9e-64 250.8 224 58.5
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.3e-60 238.0 203 63.5
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 8.1e-60 235.3 277 49.5
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.1e-51 208.4 134 74.6
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 1.3e-46 191.4 186 54.3
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 4.6e-39 166.4 201 45.3
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 3.7e-36 156.8 113 66.4
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 5.3e-35 152.9 129 64.3
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 6.1e-31 139.4 111 67.6
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 1.8e-30 137.9 123 57.7
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.2e-26 125.2 129 51.2
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 3.2e-24 117.1 110 55.5
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 7.7e-18 95.9 128 43.8
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 7.7e-18 95.9 128 43.8
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 1.6e-15 88.2 64 64.1
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.4e-14 85.1 51 78.4
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 1.7e-12 78.2 56 69.6
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 3.7e-12 77.0 60 65.0
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 1.6e-10 71.6 42 85.7
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 4.5e-10 70.1 86 45.3
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.6e-07 61.6 61 50.8


User provided reference genes

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