Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 1.1e-134 483.4 270 100.0
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 4.6e-112 408.3 270 80.7
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 1.5e-107 393.3 273 82.4
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 8.4e-106 387.5 269 79.9
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 3.2e-105 385.6 267 77.9
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 5.4e-105 384.8 273 82.8
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 2.7e-104 382.5 267 77.2
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.7e-104 382.5 269 76.2
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.0e-103 380.6 269 75.8
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 6.7e-103 377.9 270 78.1
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.3e-102 375.2 267 76.0
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 4.3e-102 375.2 269 75.5
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 7.4e-102 374.4 247 82.6
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 1.8e-100 369.8 267 75.3
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.2e-99 367.1 286 76.9
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.0e-99 366.3 283 77.7
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 2.0e-99 366.3 272 73.9
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 4.5e-99 365.2 271 74.2
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 5.5e-97 358.2 242 78.5
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 7.1e-97 357.8 243 78.6
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 9.3e-97 357.5 270 73.0
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.2e-96 357.1 300 69.0
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 1.6e-96 356.7 249 77.9
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.6e-96 356.7 249 77.9
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 4.6e-96 355.1 250 78.0
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 6.0e-96 354.8 279 71.7
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.8e-95 353.2 246 76.0
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 2.3e-95 352.8 279 71.0
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 5.1e-95 351.7 293 67.9
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 8.7e-95 350.9 267 72.3
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.1e-94 350.5 281 69.0
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 3.3e-94 349.0 249 76.3
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.6e-93 346.7 250 76.0
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 2.1e-93 346.3 253 75.1
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 2.8e-93 345.9 281 70.8
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 3.7e-93 345.5 248 75.0
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 3.7e-93 345.5 281 69.8
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 3.7e-93 345.5 269 71.4
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 4.8e-93 345.1 278 68.0
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 4.8e-93 345.1 290 65.5
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 6.2e-93 344.7 291 68.0
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 6.2e-93 344.7 275 70.2
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.8e-92 343.2 286 70.3
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 3.1e-92 342.4 274 70.1
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 4.1e-92 342.0 282 67.7
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 4.1e-92 342.0 301 68.1
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 1.5e-91 340.1 241 74.3
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.5e-91 340.1 279 71.0
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 2.0e-91 339.7 272 73.5
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 2.0e-91 339.7 272 73.5
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.0e-91 339.7 290 64.1
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 3.4e-91 339.0 249 73.1
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 5.8e-91 338.2 272 73.2
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 7.6e-91 337.8 272 73.2
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 7.6e-91 337.8 244 75.4
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 7.6e-91 337.8 244 73.4
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 7.6e-91 337.8 255 70.6
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 1.0e-90 337.4 275 73.8
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 1.3e-90 337.0 251 74.1
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 1.7e-90 336.7 306 64.4
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 5.0e-90 335.1 266 70.3
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 5.0e-90 335.1 268 68.7
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 5.0e-90 335.1 268 69.4
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 5.0e-90 335.1 289 68.5
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 6.5e-90 334.7 288 65.6
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.4e-89 333.6 271 67.9
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 2.5e-89 332.8 268 69.0
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 7.1e-89 331.3 267 68.2
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 9.3e-89 330.9 275 71.3
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 7.9e-88 327.8 277 71.8
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.0e-87 327.4 288 63.5
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.3e-87 327.0 297 61.6
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 6.7e-87 324.7 267 68.5
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 2.5e-86 322.8 260 68.8
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 5.7e-86 321.6 211 80.1
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 7.4e-86 321.2 273 65.9
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 7.4e-86 321.2 273 65.9
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 9.7e-86 320.9 286 63.3
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.1e-84 317.4 272 65.4
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 4.1e-84 315.5 267 65.5
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 4.1e-84 315.5 291 61.2
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 3.4e-83 312.4 213 76.5
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.3e-82 310.5 276 64.1
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.3e-82 310.5 276 64.1
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 6.5e-82 308.1 286 64.0
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 7.2e-81 304.7 272 62.9
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.6e-80 303.5 301 59.1
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.5e-78 297.0 309 57.9
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 4.3e-78 295.4 281 64.1
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 4.3e-78 295.4 272 63.6
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 8.2e-77 291.2 279 63.4
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 6.9e-76 288.1 282 58.2
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.3e-74 283.9 257 63.8
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 5.5e-73 278.5 181 80.7
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 1.2e-72 277.3 279 58.1
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 1.4e-71 273.9 275 63.6
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 3.0e-71 272.7 274 60.6
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 2.6e-70 269.6 275 57.1
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 2.8e-69 266.2 392 45.2
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.5e-67 259.2 174 78.2
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 4.5e-67 258.8 174 80.5
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 3.6e-64 249.2 286 55.2
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 1.2e-54 217.6 192 62.5
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.3e-50 204.1 134 81.3
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.3e-45 187.6 163 64.4
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 3.7e-45 186.0 158 65.8
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.3e-42 177.6 181 59.1
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 3.6e-40 169.5 133 73.7
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 4.4e-38 162.5 134 71.6
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.1e-33 147.9 134 60.4
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 7.3e-33 145.2 161 55.3
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.9e-28 130.6 140 62.9
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 4.1e-28 129.4 77 83.1
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.6e-25 119.0 96 65.6
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.2e-19 101.3 108 59.3
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.6e-19 100.9 113 56.6
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 1.6e-16 90.9 177 36.7
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 5.6e-09 65.9 103 49.5
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 1.6e-08 64.3 42 73.8
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 2.8e-08 63.5 72 55.6
MBI19_g32902_MAGBIO Magnolia biondii HOM05D000487 ORTHO05D011599 2.8e-08 63.5 45 75.6


User provided reference genes

Program Settings