Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 9.2e-75 283.5 145 100.0
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 1.2e-66 256.5 145 89.0
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 1.0e-65 253.4 145 86.9
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 3.0e-65 251.9 145 86.2
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 3.0e-65 251.9 145 87.6
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 3.9e-65 251.5 144 85.4
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 6.6e-65 250.8 145 85.5
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 1.1e-64 250.0 143 86.0
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 1.5e-64 249.6 145 86.2
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 2.5e-64 248.8 145 84.8
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 3.3e-64 248.4 144 86.1
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 4.3e-64 248.1 144 86.1
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 5.6e-64 247.7 144 85.4
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 7.3e-64 247.3 144 85.4
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 1.2e-63 246.5 145 84.1
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 1.6e-63 246.1 145 84.1
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 1.6e-63 246.1 144 83.3
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.6e-63 246.1 145 83.4
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 2.8e-63 245.4 144 82.6
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 3.6e-63 245.0 145 84.8
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 4.7e-63 244.6 144 84.0
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 8.1e-63 243.8 145 83.4
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.4e-62 243.0 145 81.4
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 1.4e-62 243.0 144 83.3
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 2.3e-62 242.3 145 82.8
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 3.1e-62 241.9 144 82.6
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 3.1e-62 241.9 144 81.9
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 4.0e-62 241.5 144 84.0
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 6.8e-62 240.7 145 81.4
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 6.8e-62 240.7 144 84.7
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 6.8e-62 240.7 144 80.6
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 6.8e-62 240.7 144 82.6
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.2e-61 240.0 145 80.0
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 1.5e-61 239.6 146 82.9
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 2.0e-61 239.2 145 81.4
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 2.0e-61 239.2 145 80.7
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 2.0e-61 239.2 144 80.6
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.6e-61 238.8 145 80.7
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 3.4e-61 238.4 145 80.7
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 4.4e-61 238.0 145 80.7
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 4.4e-61 238.0 145 81.4
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 4.4e-61 238.0 145 81.4
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 5.8e-61 237.7 145 80.0
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 9.9e-61 236.9 144 81.2
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 1.3e-60 236.5 144 81.2
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 1.7e-60 236.1 144 82.6
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.9e-60 235.3 145 79.3
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 3.7e-60 235.0 145 78.6
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 3.7e-60 235.0 144 81.9
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 4.9e-60 234.6 145 81.4
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 4.9e-60 234.6 145 79.3
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 4.9e-60 234.6 144 81.9
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 8.3e-60 233.8 143 81.8
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 8.3e-60 233.8 144 81.2
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 1.9e-59 232.6 145 80.7
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 1.9e-59 232.6 145 78.6
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 2.4e-59 232.3 142 81.0
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 3.2e-59 231.9 145 78.6
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 7.1e-59 230.7 143 79.7
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 7.1e-59 230.7 143 80.4
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 9.2e-59 230.3 144 80.6
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 2.1e-58 229.2 144 80.6
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 2.1e-58 229.2 144 80.6
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 2.1e-58 229.2 144 77.8
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 3.5e-58 228.4 144 79.9
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 3.5e-58 228.4 137 83.2
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 4.6e-58 228.0 145 77.9
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 4.6e-58 228.0 145 77.9
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 7.8e-58 227.3 142 79.6
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 1.0e-57 226.9 144 79.9
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 1.0e-57 226.9 145 77.9
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 2.3e-57 225.7 137 83.2
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 3.0e-57 225.3 144 78.5
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.9e-57 224.9 161 71.4
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 3.9e-57 224.9 154 74.0
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 6.6e-57 224.2 145 70.3
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 4.3e-56 221.5 143 72.7
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 1.2e-55 219.9 144 77.1
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 1.2e-55 219.9 144 77.1
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 2.1e-55 219.2 145 74.5
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 8.1e-55 217.2 131 79.4
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 1.4e-54 216.5 144 72.2
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 1.4e-54 216.5 144 72.2
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 5.2e-54 214.5 152 74.3
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 6.8e-54 214.2 154 73.4
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 6.8e-54 214.2 154 73.4
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 8.9e-54 213.8 145 73.8
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 8.9e-54 213.8 145 73.1
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 1.5e-53 213.0 145 71.7
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.8e-53 211.1 186 61.8
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 1.7e-52 209.5 145 72.4
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 1.9e-51 206.1 145 67.6
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 4.1e-51 204.9 144 71.5
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 7.8e-50 200.7 148 70.9
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 7.8e-50 200.7 145 68.3
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 7.8e-50 200.7 144 70.1
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 1.6e-47 193.0 145 64.1
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 4.7e-47 191.4 152 64.5
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 6.2e-47 191.0 134 70.9
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 1.2e-45 186.8 114 79.8
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 2.9e-44 182.2 171 60.2
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.1e-42 176.0 114 74.6
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 2.3e-41 172.6 131 71.0
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 3.9e-41 171.8 98 84.7
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 4.5e-37 158.3 95 81.1
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 3.8e-36 155.2 143 53.8
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 7.9e-34 147.5 140 52.9
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 2.8e-31 139.0 137 49.6
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 4.0e-30 135.2 146 49.3
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 9.0e-30 134.0 90 71.1
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 1.3e-28 130.2 96 68.8
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 4.2e-27 125.2 69 88.4
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.4e-22 110.2 133 51.9
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 5.5e-19 98.2 51 92.2
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 8.7e-17 90.9 53 81.1
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 1.1e-16 90.5 58 75.9
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 1.6e-15 86.7 51 82.4
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 4.1e-14 82.0 132 34.1
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 6.1e-10 68.2 132 33.3
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 2.3e-09 66.2 142 31.0
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 1.5e-08 63.5 139 31.7
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.3e-07 60.5 31 87.1
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 6.9e-06 54.7 39 69.2
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 9.1e-06 54.3 54 53.7


User provided reference genes

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