Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.0e-93 346.7 171 100.0
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 8.1e-54 214.2 188 62.2
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 5.8e-52 208.0 188 61.2
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.9e-42 176.4 197 59.4
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 3.5e-41 172.2 185 55.1
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 3.0e-40 169.1 185 53.5
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 8.7e-40 167.5 180 53.9
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 4.3e-39 165.2 187 52.9
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 5.6e-39 164.9 186 53.2
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 9.6e-39 164.1 193 51.3
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.6e-38 163.3 178 49.4
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 9.0e-37 157.5 174 52.3
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.5e-36 156.8 177 50.3
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 2.0e-36 156.4 189 49.7
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 7.6e-36 154.5 186 52.2
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 1.3e-35 153.7 189 49.7
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.7e-35 153.3 203 46.8
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 3.8e-35 152.1 189 52.4
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 3.8e-35 152.1 193 47.2
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 4.9e-35 151.8 177 47.5
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 4.9e-35 151.8 188 51.6
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 4.9e-35 151.8 164 54.9
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 8.4e-35 151.0 193 48.2
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.1e-34 150.6 189 51.3
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 2.4e-34 149.4 182 48.9
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 3.2e-34 149.1 182 48.9
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 4.2e-34 148.7 177 51.4
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.4e-34 148.3 182 51.6
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 7.1e-34 147.9 194 49.5
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 7.1e-34 147.9 182 50.5
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 1.2e-33 147.1 185 50.3
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.2e-33 147.1 179 48.0
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.6e-33 146.7 188 48.4
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.6e-33 145.2 196 49.0
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 4.6e-33 145.2 167 50.9
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 4.6e-33 145.2 185 49.2
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.0e-32 144.1 178 50.6
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 1.3e-32 143.7 174 47.7
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 1.3e-32 143.7 181 45.3
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 2.3e-32 142.9 169 49.7
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.0e-32 142.5 173 49.1
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 6.6e-32 141.4 196 48.0
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 8.7e-32 141.0 165 53.3
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 1.1e-31 140.6 163 52.8
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.1e-31 140.6 182 45.1
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 1.5e-31 140.2 183 49.2
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.5e-31 140.2 193 45.1
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.5e-31 140.2 177 46.9
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.5e-31 139.4 182 47.8
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 2.5e-31 139.4 188 47.9
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.3e-31 139.0 208 44.7
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 3.3e-31 139.0 184 47.8
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 3.3e-31 139.0 176 47.7
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 3.3e-31 139.0 175 47.4
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 4.3e-31 138.7 208 44.7
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.3e-31 138.7 208 44.7
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 4.3e-31 138.7 165 51.5
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 7.3e-31 137.9 207 43.0
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 9.6e-31 137.5 214 45.3
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 9.6e-31 137.5 177 48.6
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 9.6e-31 137.5 193 46.6
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 9.6e-31 137.5 167 48.5
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 2.1e-30 136.3 170 50.6
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.8e-30 136.0 196 46.9
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 2.8e-30 136.0 184 48.4
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 3.6e-30 135.6 181 47.5
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 4.8e-30 135.2 180 47.2
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 6.2e-30 134.8 163 46.0
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 6.2e-30 134.8 171 49.1
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.1e-30 134.4 165 49.7
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 8.1e-30 134.4 184 47.8
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 1.4e-29 133.7 201 44.3
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 1.8e-29 133.3 165 47.3
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 1.8e-29 133.3 160 49.4
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.4e-29 132.9 176 46.6
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 2.4e-29 132.9 163 46.6
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 3.1e-29 132.5 177 48.6
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.3e-29 131.7 192 45.8
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 6.9e-29 131.3 179 45.3
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.5e-28 130.2 176 47.2
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 2.6e-28 129.4 162 45.7
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 4.5e-28 128.6 165 46.7
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 5.8e-28 128.3 187 46.5
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 7.6e-28 127.9 178 44.9
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 7.6e-28 127.9 169 46.2
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 9.9e-28 127.5 182 46.7
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 1.7e-27 126.7 186 46.2
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.7e-27 126.7 181 43.1
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 2.2e-27 126.3 177 44.6
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 2.2e-27 126.3 177 44.6
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 2.2e-27 126.3 167 49.1
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 2.9e-27 125.9 175 44.0
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 2.9e-27 125.9 179 48.6
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 2.9e-27 125.9 177 45.2
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 3.8e-27 125.6 176 44.3
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 3.8e-27 125.6 189 41.3
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 8.4e-27 124.4 176 42.0
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 1.1e-26 124.0 176 43.8
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.1e-26 124.0 175 41.1
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 1.4e-26 123.6 178 40.4
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 1.4e-26 123.6 178 40.4
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.4e-26 123.6 171 46.8
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.9e-26 123.2 171 45.0
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 1.9e-26 123.2 178 40.4
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 3.2e-26 122.5 181 42.5
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 9.3e-26 120.9 170 45.9
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 9.3e-26 120.9 181 46.4
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 2.1e-25 119.8 165 43.0
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 2.7e-25 119.4 170 43.5
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 4.6e-25 118.6 178 39.9
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 4.6e-25 118.6 178 39.9
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 4.6e-25 118.6 159 44.7
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 6.0e-25 118.2 175 44.6
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 7.9e-25 117.9 173 41.0
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 7.9e-25 117.9 175 45.1
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 1.0e-24 117.5 173 41.6
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 3.9e-24 115.5 160 45.0
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 3.9e-24 115.5 167 41.9
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 8.7e-24 114.4 171 45.0
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 4.3e-23 112.1 179 44.1
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 7.4e-23 111.3 174 39.1
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 9.6e-23 110.9 168 39.9
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.3e-22 110.5 163 42.9
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 3.7e-22 109.0 168 39.9
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 4.8e-22 108.6 176 40.3
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 1.8e-21 106.7 171 39.8
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 2.4e-21 106.3 172 40.1
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 2.4e-21 106.3 174 39.1
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.3e-21 105.1 157 44.6
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 6.9e-21 104.8 175 39.4
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 9.0e-21 104.4 182 39.6
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 1.2e-20 104.0 175 36.6
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 1.5e-20 103.6 176 38.1
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 1.5e-20 103.6 179 36.9
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 2.0e-20 103.2 148 48.6
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 2.0e-20 103.2 158 43.0
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 3.4e-20 102.4 158 43.0
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.5e-20 102.1 171 41.5
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.8e-20 101.7 171 41.5
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 7.6e-20 101.3 156 42.3
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 1.3e-19 100.5 165 42.4
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 1.7e-19 100.1 175 37.7
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 2.2e-19 99.8 175 37.7
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 2.2e-19 99.8 175 37.7
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 2.2e-19 99.8 175 37.7
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 6.5e-19 98.2 174 40.2
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.1e-18 97.4 133 47.4
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 1.1e-18 97.4 155 41.9
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 4.2e-18 95.5 160 42.5
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 5.5e-18 95.1 110 46.4
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.6e-17 92.0 136 43.4
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 1.1e-15 87.4 169 38.5
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 1.5e-15 87.0 197 37.6
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 4.3e-15 85.5 167 36.5
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 7.4e-15 84.7 158 37.3
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.3e-14 84.0 95 50.5
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 1.6e-14 83.6 207 36.7
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 4.8e-14 82.0 136 38.2
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.8e-13 80.1 124 40.3
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 5.8e-12 75.1 158 37.3
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 7.6e-12 74.7 207 35.3
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.0e-11 74.3 82 58.5
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 2.2e-11 73.2 108 42.6
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.8e-11 72.4 109 42.2
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 1.4e-10 70.5 138 33.3
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-10 70.1 109 39.4
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 2.5e-10 69.7 200 34.5
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 1.6e-09 67.0 137 35.0
ATR0580G176 Amborella trichopoda HOM05D003790 ORTHO05D004481 2.1e-09 66.6 176 31.2
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-09 66.6 109 39.4
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 3.5e-09 65.9 182 34.1
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.0e-08 64.3 59 57.6
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.8e-08 63.5 118 39.8
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 1.8e-08 63.5 212 29.7
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 3.0e-08 62.8 202 27.7
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-07 60.1 104 39.4
MBI18_g24947_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 4.8e-06 55.5 72 48.6
Nn2g11432 Nelumbo nucifera HOM05D003790 ORTHO05D004481 6.3e-06 55.1 47 63.8
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 8.2e-06 54.7 41 65.9


User provided reference genes

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