Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0466 Trochodendron aralioides HOM05D005985 ORTHO05D007403 3.5e-143 511.5 246 100.0
MBI18_g28902_MAGBIO Magnolia biondii HOM05D005985 ORTHO05D007403 2.8e-100 369.0 246 70.7
Nn3g21870 Nelumbo nucifera HOM05D005985 ORTHO05D007403 2.8e-100 369.0 246 72.4
Dinv29531 Davidia involucrata HOM05D005985 ORTHO05D007403 6.3e-100 367.9 244 70.9
QL06p013713 Quercus lobata HOM05D005985 ORTHO05D007403 2.6e-98 362.5 245 69.4
PSO144G0010 Papaver somniferum HOM05D005985 ORTHO05D007403 5.9e-98 361.3 245 69.0
PSO210G5602 Papaver somniferum HOM05D005985 ORTHO05D007403 1.0e-97 360.5 246 69.1
Haze_00800 Corylus avellana HOM05D005985 ORTHO05D007403 1.3e-97 360.1 246 69.5
TWI09G1588 Tripterygium wilfordii HOM05D005985 ORTHO05D007403 1.3e-97 360.1 246 69.1
Cfa015714 Carpinus fangiana HOM05D005985 ORTHO05D007403 2.9e-97 359.0 247 69.6
PSO761G0261 Papaver somniferum HOM05D005985 ORTHO05D007403 3.8e-97 358.6 246 68.7
GSVIVG01017666001 Vitis vinifera HOM05D005985 ORTHO05D007403 5.5e-96 354.8 246 69.5
Atru.chr4.3125 Acer truncatum HOM05D005985 ORTHO05D007403 1.6e-95 353.2 245 68.6
SalBow8G2871 Salvia bowleyana HOM05D005985 ORTHO05D007403 1.6e-95 353.2 245 70.2
EL10Ac3g06274 Beta vulgaris HOM05D005985 ORTHO05D007403 2.1e-95 352.8 246 69.1
Eucgr.G02036 Eucalyptus grandis HOM05D005985 ORTHO05D007403 7.9e-95 350.9 245 67.8
RcHm_v2.0_Chr4g0426681 Rosa chinensis HOM05D005985 ORTHO05D007403 7.9e-95 350.9 246 68.3
Manes.15G003600 Manihot esculenta HOM05D005985 ORTHO05D007403 2.3e-94 349.4 245 67.8
HanXRQChr07g0194341 Helianthus annuus HOM05D005985 ORTHO05D007403 3.0e-94 349.0 246 68.3
Aqoxy2G02563 Aquilegia oxysepala HOM05D005985 ORTHO05D007403 5.1e-94 348.2 246 69.5
MD13G1144500 Malus domestica HOM05D005985 ORTHO05D007403 8.8e-94 347.4 246 67.9
Sopen03g026120 Solanum pennellii HOM05D005985 ORTHO05D007403 8.8e-94 347.4 246 68.3
SGA_v2.0_scaffold64G22045 Striga asiatica HOM05D005985 ORTHO05D007403 1.1e-93 347.1 245 67.8
AUR62029991 Chenopodium quinoa HOM05D005985 ORTHO05D007403 1.5e-93 346.7 246 67.9
ECA233G5395 Erigeron canadensis HOM05D005985 ORTHO05D007403 2.6e-93 345.9 246 68.3
Peaxi162Scf00103g01922 Petunia axillaris HOM05D005985 ORTHO05D007403 2.6e-93 345.9 246 67.5
Solyc03g096040.3 Solanum lycopersicum HOM05D005985 ORTHO05D007403 2.6e-93 345.9 246 68.3
CANSAT78G1051 Cannabis sativa HOM05D005985 ORTHO05D007403 4.4e-93 345.1 246 66.3
CDE02G0842 Ceratophyllum demersum HOM05D005985 ORTHO05D007403 4.4e-93 345.1 246 65.0
Lj6A699T60 Lonicera japonica HOM05D005985 ORTHO05D007403 5.7e-93 344.7 246 67.5
PGR031G1426 Punica granatum HOM05D005985 ORTHO05D007403 7.4e-93 344.4 245 66.9
AUR62002570 Chenopodium quinoa HOM05D005985 ORTHO05D007403 9.7e-93 344.0 246 67.5
Gorai.011G204600 Gossypium raimondii HOM05D005985 ORTHO05D007403 3.7e-92 342.0 246 66.3
Lsat_1_v5_gn_6_69481 Lactuca sativa HOM05D005985 ORTHO05D007403 3.7e-92 342.0 246 67.1
Sc24g0001290 Simmondsia chinensis HOM05D005985 ORTHO05D007403 3.7e-92 342.0 246 67.1
ClCG05G006800 Citrullus lanatus HOM05D005985 ORTHO05D007403 4.8e-92 341.7 246 66.3
PGSC0003DMG400027720 Solanum tuberosum HOM05D005985 ORTHO05D007403 8.2e-92 340.9 246 67.5
CSS0012631 Camellia sinensis var. sinensis HOM05D005985 ORTHO05D007403 1.1e-91 340.5 255 63.5
Medtr4g094720 Medicago truncatula HOM05D005985 ORTHO05D007403 1.8e-91 339.7 246 66.7
Nitab4.5_0000781g0010 Nicotiana tabacum HOM05D005985 ORTHO05D007403 1.8e-91 339.7 246 67.1
HPP92_020535 Vanilla planifolia HOM05D005985 ORTHO05D007403 4.1e-91 338.6 245 66.1
Actinidia02521 Actinidia chinensis HOM05D005985 ORTHO05D007403 5.3e-91 338.2 247 65.2
TPR.G31247 Trifolium pratense HOM05D005985 ORTHO05D007403 5.3e-91 338.2 246 66.3
Ca_18238_v3 Cicer arietinum L. HOM05D005985 ORTHO05D007403 9.1e-91 337.4 246 65.9
FAN17G1815 Fragaria x ananassa HOM05D005985 ORTHO05D007403 9.1e-91 337.4 246 65.0
Gohir.A10G176000 Gossypium hirsutum HOM05D005985 ORTHO05D007403 1.2e-90 337.0 246 64.6
Gohir.D10G182600 Gossypium hirsutum HOM05D005985 ORTHO05D007403 1.2e-90 337.0 246 65.4
Prupe.1G109000 Prunus persica HOM05D005985 ORTHO05D007403 1.6e-90 336.7 247 66.0
Potri.008G099900 Populus trichocarpa HOM05D005985 ORTHO05D007403 2.6e-90 335.9 245 66.1
arahy.Tifrunner.gnm1.ann1.7BH383 Arachis hypogaea HOM05D005985 ORTHO05D007403 4.5e-90 335.1 246 65.0
arahy.Tifrunner.gnm1.ann1.BM2Q5K Arachis hypogaea HOM05D005985 ORTHO05D007403 4.5e-90 335.1 246 65.0
Nitab4.5_0000204g0010 Nicotiana tabacum HOM05D005985 ORTHO05D007403 5.9e-90 334.7 240 65.8
CsaV3_3G015450 Cucumis sativus L. HOM05D005985 ORTHO05D007403 7.7e-90 334.3 246 63.4
Lj4g0025954 Lotus japonicus HOM05D005985 ORTHO05D007403 7.7e-90 334.3 245 65.3
ATR0796G055 Amborella trichopoda HOM05D005985 ORTHO05D007403 1.3e-89 333.6 246 65.4
Oeu020283.1 Olea europaea HOM05D005985 ORTHO05D007403 1.7e-89 333.2 246 66.7
Glyma.08G088000 Glycine max HOM05D005985 ORTHO05D007403 2.2e-89 332.8 246 65.9
VMungo0251G0059 Vigna mungo HOM05D005985 ORTHO05D007403 5.0e-89 331.6 246 65.0
MELO3C006744.2 Cucumis melo HOM05D005985 ORTHO05D007403 6.5e-89 331.3 260 61.9
Sabra08G0075600 Salix brachista HOM05D005985 ORTHO05D007403 6.5e-89 331.3 245 65.3
Phvul.002G189300 Phaseolus vulgaris HOM05D005985 ORTHO05D007403 1.5e-88 330.1 246 65.0
Psat7g085840 Pisum sativum HOM05D005985 ORTHO05D007403 2.5e-88 329.3 246 64.6
Os07g0638300 Oryza sativa ssp. japonica HOM05D005985 ORTHO05D007403 3.2e-88 328.9 245 65.3
Manes.03G210400 Manihot esculenta HOM05D005985 ORTHO05D007403 4.2e-88 328.6 245 62.0
Duzib128G0500 Durio zibethinus HOM05D005985 ORTHO05D007403 7.2e-88 327.8 246 63.4
Cpa.g.sc146.45 Carica papaya HOM05D005985 ORTHO05D007403 9.4e-88 327.4 245 61.2
Duzib212G0534 Durio zibethinus HOM05D005985 ORTHO05D007403 9.4e-88 327.4 246 63.0
Lalb_Chr07g0188301 Lupinus albus HOM05D005985 ORTHO05D007403 9.4e-88 327.4 246 65.0
Duzib128G2054 Durio zibethinus HOM05D005985 ORTHO05D007403 1.2e-87 327.0 246 63.4
FvH4_4g21120 Fragaria vesca HOM05D005985 ORTHO05D007403 2.7e-87 325.9 237 65.4
unitig_88.g27789 Utricularia gibba HOM05D000412 ORTHO05D007403 2.7e-87 325.9 245 64.1
Ciclev10007138m.g Citrus clementina HOM05D005985 ORTHO05D007403 4.7e-87 325.1 237 67.1
DCAR_023383 Daucus carota HOM05D005985 ORTHO05D007403 6.1e-87 324.7 248 64.5
AL1G54700 Arabidopsis lyrata HOM05D005985 ORTHO05D007403 1.4e-86 323.6 247 64.4
Carub.0001s3723 Capsella rubella HOM05D005985 ORTHO05D007403 1.4e-86 323.6 247 64.4
Aa31LG10G5610 Aethionema arabicum HOM05D005985 ORTHO05D007403 2.3e-86 322.8 246 63.4
AT1G48130 Arabidopsis thaliana HOM05D005985 ORTHO05D007403 1.1e-85 320.5 247 64.0
THA.LOC104821806 Tarenaya hassleriana HOM05D005985 ORTHO05D007403 1.1e-85 320.5 243 63.4
Sp1g35100 Schrenkiella parvula HOM05D005985 ORTHO05D007403 2.6e-85 319.3 247 63.2
Rhsim02G0000600 Rhododendron simsii HOM05D005985 ORTHO05D007403 4.4e-85 318.5 246 61.8
Migut.O00392 Erythranthe guttata HOM05D005985 ORTHO05D007403 1.3e-84 317.0 249 63.5
BraA05t21027Z Brassica rapa HOM05D005985 ORTHO05D007403 1.1e-83 313.9 247 63.2
Nn4g25416 Nelumbo nucifera HOM05D005985 ORTHO05D007403 1.4e-83 313.5 326 50.3
BraA05t20750Z Brassica rapa HOM05D005985 ORTHO05D007403 3.1e-83 312.4 247 62.3
Zm00001eb328770 Zea mays HOM05D005985 ORTHO05D007403 1.2e-82 310.5 256 60.2
A05p21210 Brassica napus HOM05D005985 ORTHO05D007403 5.9e-82 308.1 247 61.5
Thhalv10012121m.g Eutrema salsugineum HOM05D005985 ORTHO05D007403 5.9e-82 308.1 247 61.5
BcaC05g27595 Brassica carinata HOM05D005985 ORTHO05D007403 7.7e-82 307.8 247 61.1
CARHR037770 Cardamine hirsuta HOM05D005985 ORTHO05D007403 7.7e-82 307.8 247 61.9
Migut.G00012 Erythranthe guttata HOM05D005985 ORTHO05D007403 1.0e-81 307.4 248 63.3
BolC6t37315H Brassica oleracea HOM05D005985 ORTHO05D007403 2.2e-81 306.2 247 60.7
C05p35800 Brassica napus HOM05D005985 ORTHO05D007403 3.8e-81 305.4 247 60.7
BolC5t32296H Brassica oleracea HOM05D005985 ORTHO05D007403 1.1e-80 303.9 247 60.7
Os07g0638400 Oryza sativa ssp. japonica HOM05D005985 ORTHO05D007403 1.6e-79 300.1 245 59.2
Duzib212G0439 Durio zibethinus HOM05D005985 ORTHO05D007403 2.1e-79 299.7 246 59.8
BcaB02g10720 Brassica carinata HOM05D005985 ORTHO05D007403 2.7e-79 299.3 247 59.5
SMO367G0796 Selaginella moellendorffii HOM05D005985 ORTHO05D007403 4.0e-78 295.4 245 54.7
CAN.G546.41 Capsicum annuum HOM05D005985 ORTHO05D007403 3.7e-76 288.9 246 60.2
SEGI_14508 Sequoiadendron giganteum HOM05D005985 ORTHO05D007403 1.1e-75 287.3 241 53.9
Pp3c22_8470 Physcomitrium patens HOM05D005985 ORTHO05D007403 5.0e-73 278.5 243 56.0
Mapoly0057s0102 Marchantia polymorpha HOM05D005985 ORTHO05D007403 1.9e-72 276.6 243 54.3
AagrBONN_evm.TU.Sc2ySwM_228.1443 Anthoceros agrestis HOM05D005985 ORTHO05D007403 3.0e-70 269.2 245 53.1
COL.COLO4_34540 Corchorus olitorius HOM05D005985 ORTHO05D007403 5.2e-70 268.5 167 73.7
CBR_g8949 Chara braunii HOM05D005985 ORTHO05D007403 5.7e-69 265.0 242 52.9
Pp3c10_21340 Physcomitrium patens HOM05D005985 ORTHO05D007403 7.3e-64 248.1 240 47.1
SMO147G0228 Selaginella moellendorffii HOM05D005985 ORTHO05D007403 5.2e-62 241.9 239 47.3
Mapoly0042s0090 Marchantia polymorpha HOM05D005985 ORTHO05D007403 8.9e-62 241.1 240 45.8
Pp3c20_21100 Physcomitrium patens HOM05D005985 ORTHO05D007403 1.5e-61 240.4 240 45.4
SEGI_03003 Sequoiadendron giganteum HOM05D005985 ORTHO05D007403 1.7e-60 236.9 240 45.8
AagrBONN_evm.TU.Sc2ySwM_117.1081 Anthoceros agrestis HOM05D005985 ORTHO05D007403 2.9e-60 236.1 241 45.6
PRCOL_00004927 Prasinoderma coloniale HOM05D005985 ORTHO05D007403 1.4e-54 217.2 245 42.9
AagrBONN_evm.TU.Sc2ySwM_228.1273 Anthoceros agrestis HOM05D005985 ORTHO05D007403 2.7e-50 203.0 244 40.2
Thecc.04G309900 Theobroma cacao HOM05D005985 ORTHO05D007403 1.2e-47 194.1 128 69.5
Cfa026758 Carpinus fangiana HOM05D005985 ORTHO05D007403 6.8e-46 188.3 243 37.9
Glyma.05G133466 Glycine max HOM05D005985 ORTHO05D007403 9.2e-43 177.9 109 78.9
Haze_27189 Corylus avellana HOM05D005985 ORTHO05D007403 3.9e-41 172.6 240 38.3
AagrBONN_evm.TU.Sc2ySwM_344.4472 Anthoceros agrestis HOM05D005985 ORTHO05D007403 3.3e-40 169.5 235 34.9
GSVIVG01034909001 Vitis vinifera HOM05D005985 ORTHO05D007403 3.4e-37 159.5 117 64.1
Glyma.05G133500 Glycine max HOM05D005985 ORTHO05D007403 1.1e-35 154.5 134 54.5
MD16G1139600 Malus domestica HOM05D005985 ORTHO05D007403 1.9e-35 153.7 186 47.8
Nn1g05419 Nelumbo nucifera HOM05D005985 ORTHO05D007403 9.2e-35 151.4 115 63.5
C06p21300 Brassica napus HOM05D005985 ORTHO05D007403 2.0e-29 133.7 113 53.1
Nn1g05808 Nelumbo nucifera HOM05D005985 ORTHO05D007403 3.4e-29 132.9 115 58.3
GSVIVG01017665001 Vitis vinifera HOM05D005985 ORTHO05D007403 7.6e-29 131.7 98 62.2
Gorai.001G249700 Gossypium raimondii HOM05D005985 ORTHO05D007403 4.0e-22 109.4 101 54.5
Gohir.D01G126866 Gossypium hirsutum HOM05D005985 ORTHO05D007403 4.5e-21 105.9 100 54.0
Gorai.002G157500 Gossypium raimondii HOM05D005985 ORTHO05D007403 5.4e-19 99.0 100 51.0
Cc03_g00310 Coffea canephora HOM05D005985 ORTHO05D007403 7.1e-19 98.6 58 82.8
Haze_27581 Corylus avellana HOM05D003127 ORTHO05D003709 6.0e-10 68.9 158 26.6
Cre17.g743897 Chlamydomonas reinhardtii HOM05D003127 ORTHO05D003709 3.0e-09 66.6 187 25.1
Lalb_Chr13g0293491 Lupinus albus HOM05D005985 ORTHO05D007403 4.3e-08 62.8 55 50.9
Lalb_Chr13g0293501 Lupinus albus HOM05D005985 ORTHO05D007403 4.3e-08 62.8 44 65.9
BcaC01g01496 Brassica carinata HOM05D005985 ORTHO05D007403 3.1e-06 56.6 100 35.0


User provided reference genes

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