Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 0.0e+00 2603.9 1321 100.0
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 0.0e+00 1669.1 1303 66.8
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 0.0e+00 1619.4 1308 65.2
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 0.0e+00 1598.9 1331 63.9
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 0.0e+00 1578.5 1304 63.0
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 0.0e+00 1542.7 1290 62.8
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1539.6 1292 63.5
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1517.7 1299 61.2
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1509.6 1316 60.4
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 0.0e+00 1504.2 1300 61.5
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 0.0e+00 1480.3 1421 56.3
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 0.0e+00 1477.6 1312 59.8
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 0.0e+00 1477.2 1280 60.0
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1473.8 1312 59.1
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 0.0e+00 1469.9 1298 58.9
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1447.2 1302 58.8
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 0.0e+00 1444.5 1286 59.3
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 0.0e+00 1443.3 1190 62.9
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 0.0e+00 1430.2 1294 57.4
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 0.0e+00 1429.8 1301 57.4
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 0.0e+00 1412.9 1314 57.8
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 0.0e+00 1397.1 1305 56.1
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 0.0e+00 1387.1 1309 56.6
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 0.0e+00 1381.3 1305 55.6
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 0.0e+00 1374.0 1305 55.6
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 0.0e+00 1373.2 1276 57.4
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 0.0e+00 1372.8 1286 55.7
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 0.0e+00 1367.4 1280 55.9
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 0.0e+00 1364.4 1263 57.0
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 0.0e+00 1361.3 1282 55.0
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 0.0e+00 1359.7 1281 55.2
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 0.0e+00 1355.9 1153 61.1
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 0.0e+00 1352.4 1279 55.3
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 0.0e+00 1351.3 1151 61.7
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 0.0e+00 1345.1 1308 57.6
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 0.0e+00 1340.9 1286 54.8
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 0.0e+00 1330.1 1278 54.6
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 0.0e+00 1325.1 1280 53.8
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 0.0e+00 1318.1 1285 54.8
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 0.0e+00 1313.9 1328 53.8
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 0.0e+00 1310.4 1287 54.2
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 0.0e+00 1302.7 1278 53.8
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 0.0e+00 1298.9 1277 53.7
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 0.0e+00 1297.3 1306 52.4
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1294.6 1301 53.0
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 0.0e+00 1288.9 1282 53.3
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 0.0e+00 1286.9 1146 58.3
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 0.0e+00 1286.6 1279 53.7
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 0.0e+00 1285.8 1297 53.5
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1272.3 1298 52.5
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 0.0e+00 1267.3 1136 58.5
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 0.0e+00 1256.5 1322 51.5
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 0.0e+00 1248.8 1284 51.2
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 0.0e+00 1238.4 1055 61.2
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 0.0e+00 1234.6 1292 50.6
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 0.0e+00 1234.2 1343 51.2
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 0.0e+00 1232.2 1284 52.5
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 0.0e+00 1231.9 1294 51.2
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 0.0e+00 1228.8 1283 51.0
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1226.8 1318 51.0
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 0.0e+00 1219.1 1293 50.5
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 0.0e+00 1206.0 1284 51.0
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 0.0e+00 1204.5 1308 50.7
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 0.0e+00 1200.3 1040 60.0
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 0.0e+00 1194.5 1293 50.2
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 0.0e+00 1194.1 1302 49.9
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 0.0e+00 1192.9 1285 50.4
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 0.0e+00 1184.5 1295 50.3
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 0.0e+00 1184.1 1256 51.2
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 0.0e+00 1181.8 1285 50.1
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 0.0e+00 1181.4 1128 55.4
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 0.0e+00 1178.7 1295 49.6
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 0.0e+00 1178.3 1295 50.0
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 0.0e+00 1178.3 1295 50.0
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 0.0e+00 1176.8 1150 54.6
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 0.0e+00 1161.7 1296 49.5
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 0.0e+00 1144.4 1281 49.8
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 0.0e+00 1132.5 1123 53.9
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 0.0e+00 1128.6 1284 49.1
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 0.0e+00 1105.5 1290 48.2
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 0.0e+00 1103.2 945 61.4
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 0.0e+00 1088.9 1205 50.1
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 9.0e-312 1074.3 1241 48.8
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.1e-296 1023.8 990 55.4
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 5.4e-291 1005.0 866 61.8
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 2.0e-285 986.5 751 67.4
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 1.5e-277 960.3 1212 46.4
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 6.0e-274 948.3 1158 46.2
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 2.3e-273 946.4 1120 47.0
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 1.1e-259 901.0 1055 47.9
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 2.6e-248 863.2 1016 45.7
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 2.5e-235 820.1 1330 38.0
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.4e-233 814.3 844 49.9
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 4.1e-230 802.7 765 56.7
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 5.7e-224 782.3 821 50.5
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 2.3e-209 733.8 1030 42.1
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 2.8e-186 657.1 1226 36.1
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 2.3e-180 637.5 503 68.0
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 4.3e-179 633.3 676 51.2
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 4.8e-178 629.8 712 51.0
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 1.5e-168 598.2 469 67.4
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 3.1e-161 573.9 592 53.0
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 7.4e-155 552.7 660 47.1
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.1e-129 469.2 477 53.9
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 5.9e-128 463.4 396 62.9
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 3.6e-117 427.6 479 51.1
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 5.5e-110 403.7 1260 28.0
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 4.9e-106 390.6 1250 26.9
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 1.4e-97 362.5 608 40.6
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 4.3e-94 350.9 351 51.3
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 3.1e-92 344.7 389 46.0
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.1e-89 336.3 382 48.7
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 6.0e-88 330.5 390 45.4
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 4.0e-60 238.0 285 46.7
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 1.3e-50 206.5 318 41.5
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 7.9e-48 197.2 165 58.8
Psat0s1368g0040 Pisum sativum HOM05D005651 ORTHO05D006877 1.1e-41 176.8 192 47.9
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 1.1e-38 166.8 128 63.3
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 1.2e-35 156.8 138 61.6
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 6.5e-34 151.0 121 67.8
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 8.5e-34 150.6 150 53.3
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 2.5e-33 149.1 129 53.5
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 1.7e-29 136.3 116 62.1
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 9.4e-25 120.6 110 60.0
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 9.4e-25 120.6 125 51.2
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 2.0e-22 112.8 207 32.9
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 8.5e-18 97.4 117 47.0
CBR_g39378 Chara braunii HOM05D005651 ORTHO05D006877 4.8e-13 81.6 251 24.7
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 1.2e-11 77.0 65 58.5
TPR.G28787 Trifolium pratense HOM05D005651 ORTHO05D006877 4.5e-11 75.1 70 58.6
Pp3c5_2370 Physcomitrium patens HOM05D005651 ORTHO05D006877 2.2e-10 72.8 299 24.4
SHI01042 Sapria himalayana HOM05D005651 ORTHO05D006877 8.5e-10 70.9 57 64.9


User provided reference genes

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