Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 2.0e-102 376.3 274 100.0
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 1.1e-55 221.1 130 89.2
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 1.2e-54 217.6 130 87.7
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 2.0e-54 216.9 128 88.3
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 3.4e-54 216.1 130 86.9
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 5.8e-54 215.3 130 87.7
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 9.9e-54 214.5 130 86.9
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.7e-53 213.8 128 86.7
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.7e-53 213.8 130 86.9
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 2.2e-53 213.4 130 84.6
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 3.8e-53 212.6 128 86.7
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 3.8e-53 212.6 128 86.7
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 6.4e-53 211.8 130 85.4
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.1e-52 211.1 128 85.9
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.1e-52 211.1 128 85.2
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 1.9e-52 210.3 130 85.4
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 1.9e-52 210.3 128 84.4
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 4.2e-52 209.1 130 83.1
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 7.1e-52 208.4 126 84.9
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 7.1e-52 208.4 126 84.9
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 9.3e-52 208.0 130 83.1
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 9.3e-52 208.0 130 83.1
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 1.2e-51 207.6 130 83.8
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.2e-51 207.6 131 80.9
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.6e-51 207.2 128 84.4
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.6e-51 207.2 128 84.4
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 2.1e-51 206.8 130 82.3
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.1e-51 206.8 130 83.8
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 2.7e-51 206.5 128 84.4
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 2.7e-51 206.5 128 81.2
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 3.5e-51 206.1 130 83.1
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 3.5e-51 206.1 128 83.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 4.6e-51 205.7 128 82.0
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 4.6e-51 205.7 128 82.8
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 6.0e-51 205.3 127 82.7
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 7.8e-51 204.9 130 82.3
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 7.8e-51 204.9 130 82.3
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 7.8e-51 204.9 130 83.1
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 7.8e-51 204.9 122 86.1
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.0e-50 204.5 130 83.1
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.0e-50 204.5 130 83.1
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.7e-50 203.8 134 82.1
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 2.3e-50 203.4 128 80.5
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 3.0e-50 203.0 130 80.8
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 6.6e-50 201.8 130 80.8
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 6.6e-50 201.8 130 81.5
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 6.6e-50 201.8 130 83.8
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 6.6e-50 201.8 130 78.5
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 8.7e-50 201.4 130 80.8
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.1e-49 201.1 128 79.7
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.1e-49 201.1 130 80.8
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.9e-49 200.3 127 80.3
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 1.9e-49 200.3 130 80.0
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 4.3e-49 199.1 128 79.7
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.6e-49 198.7 127 78.7
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 7.3e-49 198.4 127 78.0
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.3e-48 197.6 128 78.9
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.3e-48 197.6 128 79.7
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 3.6e-48 196.1 130 77.7
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 4.8e-48 195.7 126 78.6
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 4.8e-48 195.7 130 76.9
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 4.8e-48 195.7 128 78.9
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.1e-47 194.5 128 78.1
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.1e-47 193.0 132 79.5
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 3.1e-47 193.0 126 77.8
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 4.0e-47 192.6 131 77.9
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 4.0e-47 192.6 130 74.6
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.2e-46 191.0 128 75.8
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.2e-46 191.0 127 78.0
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 1.2e-46 191.0 130 76.9
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.2e-46 191.0 130 75.4
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 1.5e-46 190.7 130 76.2
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 2.0e-46 190.3 119 80.7
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 3.4e-46 189.5 128 75.8
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 9.9e-46 188.0 128 75.8
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 9.9e-46 188.0 128 75.0
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.3e-45 187.6 130 73.8
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.7e-45 187.2 130 73.8
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 3.8e-45 186.0 112 86.6
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 3.8e-45 186.0 121 79.3
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 1.1e-44 184.5 131 78.6
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 2.4e-44 183.3 128 76.6
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 3.2e-44 183.0 128 72.7
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 1.2e-43 181.0 136 74.3
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 1.6e-43 180.6 122 76.2
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 6.0e-43 178.7 128 75.0
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.3e-42 176.8 120 75.8
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 6.7e-42 175.3 171 58.5
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 6.7e-42 175.3 136 68.4
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 1.9e-41 173.7 125 76.0
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 4.8e-40 169.1 128 70.3
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 2.4e-39 166.8 128 69.5
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 2.4e-39 166.8 128 69.5
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 5.3e-39 165.6 185 56.2
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.2e-38 164.5 103 83.5
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 9.9e-38 161.4 98 84.7
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 1.9e-36 157.1 128 62.5
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.1e-35 153.7 96 81.2
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 3.5e-35 152.9 128 60.2
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 3.5e-35 152.9 116 70.7
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 5.1e-34 149.1 98 76.5
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 8.7e-34 148.3 101 79.2
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.1e-33 147.9 103 72.8
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 3.7e-32 142.9 92 80.4
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 7.1e-28 128.6 92 72.8
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 2.1e-27 127.1 120 55.8
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 3.0e-26 123.2 94 70.2
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.9e-25 120.6 72 83.3
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 5.7e-25 119.0 92 70.7
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 4.8e-24 115.9 93 68.8
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 6.9e-23 112.1 108 63.0
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.6e-22 110.2 66 86.4
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 3.8e-21 106.3 99 50.5
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 5.5e-20 102.4 63 76.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 9.3e-20 101.7 87 66.7
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 1.2e-19 101.3 62 79.0
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 8.8e-18 95.1 62 74.2
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.3e-16 91.3 63 71.4
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 2.8e-16 90.1 64 70.3
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 1.4e-15 87.8 64 70.3
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 4.1e-15 86.3 57 80.7
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 3.6e-11 73.2 117 33.3
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 3.3e-09 66.6 115 33.0
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 7.4e-09 65.5 43 76.7
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 9.7e-09 65.1 61 49.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.4e-07 61.2 74 54.1


User provided reference genes

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