Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 1.3e-114 416.4 206 100.0
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 4.9e-98 361.3 205 85.9
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 2.5e-94 349.0 206 81.6
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 2.8e-93 345.5 203 82.3
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 3.7e-93 345.1 205 81.0
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.1e-92 343.6 204 84.3
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 2.4e-92 342.4 203 81.8
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 5.3e-92 341.3 204 79.9
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 9.0e-92 340.5 197 83.8
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 3.4e-91 338.6 201 82.1
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 5.8e-91 337.8 204 78.4
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 9.9e-91 337.0 203 79.8
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 1.1e-89 333.6 203 79.3
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 2.4e-89 332.4 203 81.3
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 3.2e-89 332.0 204 78.9
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 7.1e-89 330.9 205 80.5
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 2.7e-88 328.9 212 78.3
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.0e-87 327.0 198 77.8
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 1.0e-87 327.0 196 79.6
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 1.0e-87 327.0 201 75.6
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 2.3e-87 325.9 207 77.8
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 3.0e-87 325.5 203 77.3
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 3.9e-87 325.1 199 81.4
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 8.7e-87 323.9 193 81.3
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 8.7e-87 323.9 207 76.3
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 2.5e-86 322.4 204 76.0
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 2.5e-86 322.4 204 76.0
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 3.3e-86 322.0 199 80.4
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 3.3e-86 322.0 201 75.1
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 3.3e-86 322.0 204 75.5
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 9.6e-86 320.5 199 75.4
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 1.3e-85 320.1 201 74.1
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 3.7e-85 318.5 201 77.6
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 3.7e-85 318.5 203 74.9
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 4.8e-85 318.2 199 75.9
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 4.8e-85 318.2 201 75.1
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 6.2e-85 317.8 202 76.2
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 6.2e-85 317.8 204 73.0
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 8.2e-85 317.4 202 75.7
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.1e-84 317.0 203 75.4
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 1.1e-84 317.0 201 73.1
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 2.4e-84 315.8 194 78.4
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 1.5e-83 313.2 201 74.6
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 1.5e-83 313.2 202 74.8
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 2.6e-83 312.4 203 74.9
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.2e-82 309.3 203 73.4
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 2.9e-82 308.9 201 72.6
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 3.8e-82 308.5 201 71.6
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 6.5e-82 307.8 197 75.6
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.4e-81 306.6 220 69.5
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 2.5e-81 305.8 201 72.1
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 5.5e-81 304.7 204 70.6
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 9.3e-81 303.9 201 69.7
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 1.2e-80 303.5 201 71.6
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 1.6e-80 303.1 198 71.2
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 2.7e-80 302.4 223 67.3
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 6.0e-80 301.2 198 72.7
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 1.8e-79 299.7 191 77.0
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 1.1e-78 297.0 195 73.8
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 1.1e-78 297.0 175 83.4
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 1.9e-78 296.2 191 74.3
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 2.5e-78 295.8 225 65.3
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.6e-77 293.1 201 68.7
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 2.1e-77 292.7 180 80.0
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.4e-76 290.0 232 60.8
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 3.1e-76 288.9 195 72.8
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 1.5e-75 286.6 193 70.5
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 1.3e-74 283.5 203 66.0
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 3.8e-74 282.0 191 70.7
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 3.8e-74 282.0 194 69.1
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 1.1e-73 280.4 205 66.8
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 3.2e-73 278.9 189 69.8
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 4.2e-73 278.5 202 66.8
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 1.6e-72 276.6 198 69.2
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 2.3e-71 272.7 203 65.0
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 3.9e-71 271.9 195 68.2
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 5.1e-71 271.6 167 76.0
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 5.7e-70 268.1 199 66.8
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 1.8e-68 263.1 191 66.5
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.4e-65 253.4 202 61.4
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 9.4e-65 250.8 156 76.3
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 8.8e-63 244.2 158 73.4
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.3e-61 240.4 195 59.0
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 1.8e-60 236.5 155 74.2
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 4.8e-53 211.8 139 75.5
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 2.2e-50 203.0 127 76.4
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 2.2e-50 203.0 127 76.4
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 5.0e-50 201.8 138 71.7
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.1e-49 200.7 203 52.7
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 1.5e-49 200.3 147 71.4
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 5.5e-49 198.4 201 49.3
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 8.2e-45 184.5 127 74.0
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 9.1e-44 181.0 169 55.6
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 7.7e-43 177.9 164 59.1
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 2.1e-40 169.9 195 44.6
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 3.6e-40 169.1 189 41.8
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 4.0e-39 165.6 187 41.7
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 1.7e-37 160.2 130 59.2
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 3.8e-34 149.1 128 53.1
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 4.7e-32 142.1 180 48.9
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 9.8e-30 134.4 114 60.5
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.7e-26 123.6 93 68.8
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 7.3e-25 118.2 84 65.5
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 7.3e-25 118.2 76 76.3
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 9.5e-25 117.9 65 83.1
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 4.7e-24 115.5 157 43.9
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 4.4e-22 109.0 87 62.1
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 1.7e-21 107.1 88 60.2
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 2.7e-19 99.8 191 32.5
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 8.6e-18 94.7 107 56.1
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 4.3e-17 92.4 64 70.3
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 4.0e-15 85.9 160 36.2
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 4.6e-11 72.4 44 79.5
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 1.1e-09 67.8 39 69.2
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 1.4e-07 60.8 37 70.3
AagrBONN_evm.TU.Sc2ySwM_362.2804 Anthoceros agrestis HOM05D006956 ORTHO05D008824 3.1e-07 59.7 65 49.2
AagrBONN_evm.TU.Sc2ySwM_228.148 Anthoceros agrestis HOM05D004675 ORTHO05D005631 6.8e-07 58.5 170 23.5
MCO02G468 Micromonas commoda HOM05D006956 ORTHO05D008824 8.9e-07 58.2 85 41.2
SMO201G0213 Selaginella moellendorffii HOM05D004675 ORTHO05D005631 3.4e-06 56.2 148 25.0
SGA_v2.0_scaffold62G21353 Striga asiatica HOM05D058974 ORTHO05D402092 9.9e-06 54.7 32 78.1


User provided reference genes

Program Settings