Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0390 Trochodendron aralioides HOM05D003812 ORTHO05D004393 0.0e+00 1228.0 621 100.0
Actinidia18400 Actinidia chinensis HOM05D003812 ORTHO05D004393 3.1e-204 715.7 621 63.1
CSS0041441 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 8.4e-202 707.6 620 64.0
Aqoxy7G02949 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 1.1e-198 697.2 628 60.0
GSVIVG01038248001 Vitis vinifera HOM05D003812 ORTHO05D004393 5.9e-195 684.9 659 57.4
PSO170G6215 Papaver somniferum HOM05D003812 ORTHO05D004393 6.5e-194 681.4 622 62.4
Aqoxy4G02750 Aquilegia oxysepala HOM05D003812 ORTHO05D004393 6.7e-191 671.4 667 57.3
Thecc.03G204100 Theobroma cacao HOM05D003812 ORTHO05D004393 1.0e-186 657.5 614 56.8
Cfa008512 Carpinus fangiana HOM05D003812 ORTHO05D004393 1.1e-177 627.5 625 55.8
Gohir.D08G113808 Gossypium hirsutum HOM05D003812 ORTHO05D004393 2.5e-177 626.3 620 56.9
MSTRG.26255 Avicennia marina HOM05D003812 ORTHO05D004393 9.4e-177 624.4 625 57.0
Gorai.004G122600 Gossypium raimondii HOM05D003812 ORTHO05D004393 1.6e-176 623.6 620 56.3
Ciclev10027241m.g Citrus clementina HOM05D003812 ORTHO05D004393 2.0e-174 616.7 622 57.4
Prupe.7G062100 Prunus persica HOM05D003812 ORTHO05D004393 1.7e-173 613.6 623 54.1
MD15G1143400 Malus domestica HOM05D003812 ORTHO05D004393 3.7e-173 612.5 625 53.6
Gohir.A08G102525 Gossypium hirsutum HOM05D003812 ORTHO05D004393 8.2e-173 611.3 620 54.4
QL10p064313 Quercus lobata HOM05D003812 ORTHO05D004393 2.4e-172 609.8 626 53.7
Manes.01G010200 Manihot esculenta HOM05D003812 ORTHO05D004393 3.1e-172 609.4 622 57.9
Nn1g08169 Nelumbo nucifera HOM05D003812 ORTHO05D004393 1.7e-170 603.6 433 67.2
COL.COLO4_16818 Corchorus olitorius HOM05D003812 ORTHO05D004393 3.8e-170 602.4 703 51.4
Atru.chr3.1997_Atru.chr3.1998 Acer truncatum HOM05D003812 ORTHO05D004393 3.2e-169 599.4 624 53.7
Cpa.g.sc151.5 Carica papaya HOM05D003812 ORTHO05D004393 3.2e-169 599.4 615 51.9
CANSAT54G2113 Cannabis sativa HOM05D003812 ORTHO05D004393 3.0e-167 592.8 630 54.6
TWI63G1503 Tripterygium wilfordii HOM05D003812 ORTHO05D004393 4.0e-167 592.4 621 53.9
Lsat_1_v5_gn_8_131861 Lactuca sativa HOM05D003812 ORTHO05D004393 2.6e-166 589.7 620 55.0
FvH4_4g37371 Fragaria vesca HOM05D003812 ORTHO05D004393 4.8e-165 585.5 626 52.6
Migut.K00296 Erythranthe guttata HOM05D003812 ORTHO05D004393 3.8e-162 575.9 625 55.2
Lj2g0024194 Lotus japonicus HOM05D003812 ORTHO05D004393 3.8e-162 575.9 627 52.5
VMungo1215G0546 Vigna mungo HOM05D003812 ORTHO05D004393 8.8e-159 564.7 632 52.2
Rhsim09G0003800 Rhododendron simsii HOM05D003812 ORTHO05D004393 7.5e-158 561.6 684 48.5
Sc25g0002340 Simmondsia chinensis HOM05D003812 ORTHO05D004393 1.3e-157 560.8 493 57.2
Lj2g0003816 Lotus japonicus HOM05D003812 ORTHO05D004393 6.3e-157 558.5 637 51.0
FvH4_1g00230 Fragaria vesca HOM05D003812 ORTHO05D004393 1.6e-155 553.9 624 51.0
DCAR_023841 Daucus carota HOM05D003812 ORTHO05D004393 2.0e-155 553.5 634 53.0
Potri.017G007200 Populus trichocarpa HOM05D003812 ORTHO05D004393 7.7e-155 551.6 624 50.3
Glyma.11G082800 Glycine max HOM05D003812 ORTHO05D004393 5.0e-154 548.9 620 51.6
Phvul.002G113100 Phaseolus vulgaris HOM05D003812 ORTHO05D004393 9.5e-153 544.7 620 51.0
CAN.G164.18 Capsicum annuum HOM05D003812 ORTHO05D004393 3.6e-152 542.7 627 50.2
Ca_17095_v3 Cicer arietinum L. HOM05D003812 ORTHO05D004393 1.4e-151 540.8 616 51.6
Sopen12g006540 Solanum pennellii HOM05D003812 ORTHO05D004393 1.4e-151 540.8 653 50.5
arahy.Tifrunner.gnm1.ann1.SFVM41 Arachis hypogaea HOM05D003812 ORTHO05D004393 2.3e-151 540.0 616 49.2
arahy.Tifrunner.gnm1.ann1.U9V8RX Arachis hypogaea HOM05D003812 ORTHO05D004393 4.4e-150 535.8 622 48.9
THA.LOC104814949 Tarenaya hassleriana HOM05D003812 ORTHO05D004393 7.5e-150 535.0 626 47.4
AT3G49410 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 5.4e-148 528.9 610 47.0
PGR142G2470 Punica granatum HOM05D003812 ORTHO05D004393 7.0e-148 528.5 622 51.9
TAR636G0947 Trochodendron aralioides HOM05D003812 ORTHO05D004393 2.7e-147 526.6 265 96.6
AT5G24450 Arabidopsis thaliana HOM05D003812 ORTHO05D004393 1.7e-146 523.9 621 46.9
Psat3g143480 Pisum sativum HOM05D003812 ORTHO05D004393 2.3e-146 523.5 622 51.4
ECA246G4500 Erigeron canadensis HOM05D003812 ORTHO05D004393 2.9e-146 523.1 620 47.4
Sabra17G0008000 Salix brachista HOM05D003812 ORTHO05D004393 2.9e-146 523.1 684 46.6
Thhalv10003925m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 1.1e-145 521.2 614 48.5
FAN26G2119 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.1e-145 521.2 649 48.1
Carub.0006s2228 Capsella rubella HOM05D003812 ORTHO05D004393 5.6e-145 518.8 607 47.6
AL5G29170 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 9.5e-145 518.1 610 46.7
TPR.G11261 Trifolium pratense HOM05D003812 ORTHO05D004393 1.6e-144 517.3 631 48.8
CARHR158380 Cardamine hirsuta HOM05D003812 ORTHO05D004393 3.6e-144 516.2 612 46.2
Sp5g12660 Schrenkiella parvula HOM05D003812 ORTHO05D004393 3.6e-144 516.2 619 47.0
SGA_v2.0_scaffold12G06029 Striga asiatica HOM05D003812 ORTHO05D004393 6.1e-144 515.4 698 47.4
Sp2g22880 Schrenkiella parvula HOM05D003812 ORTHO05D004393 8.0e-144 515.0 614 49.7
MELO3C026683.2 Cucumis melo HOM05D003812 ORTHO05D004393 2.3e-143 513.5 625 47.0
Lj4C178G3 Lonicera japonica HOM05D003812 ORTHO05D004393 2.3e-143 513.5 655 46.4
CARHR188960 Cardamine hirsuta HOM05D003812 ORTHO05D004393 1.5e-142 510.8 616 47.1
Nitab4.5_0010162g0010 Nicotiana tabacum HOM05D003812 ORTHO05D004393 2.0e-142 510.4 489 55.6
CsaV3_5G037130 Cucumis sativus L. HOM05D003812 ORTHO05D004393 2.6e-142 510.0 624 46.8
ClCG09G014660 Citrullus lanatus HOM05D003812 ORTHO05D004393 4.4e-142 509.2 629 47.7
AL6G36030 Arabidopsis lyrata HOM05D003812 ORTHO05D004393 5.8e-142 508.8 615 48.6
TPR.G23263 Trifolium pratense HOM05D003812 ORTHO05D004393 5.8e-142 508.8 629 47.2
SalBow5G1547 Salvia bowleyana HOM05D003812 ORTHO05D004393 1.3e-141 507.7 632 49.5
Medtr7g059160 Medicago truncatula HOM05D003812 ORTHO05D004393 2.9e-141 506.5 644 49.2
BolC1t03017H Brassica oleracea HOM05D003812 ORTHO05D004393 3.7e-141 506.1 632 44.6
SalBow5G1511 Salvia bowleyana HOM05D003812 ORTHO05D004393 3.7e-141 506.1 632 49.4
HanXRQChr05g0135721 Helianthus annuus HOM05D003812 ORTHO05D004393 8.3e-141 505.0 623 49.4
BraA01t02385Z Brassica rapa HOM05D003812 ORTHO05D004393 3.2e-140 503.1 630 43.7
A01p24730 Brassica napus HOM05D003812 ORTHO05D004393 4.1e-140 502.7 630 43.5
C01p30850 Brassica napus HOM05D003812 ORTHO05D004393 4.6e-139 499.2 621 44.6
Thhalv10010256m.g Eutrema salsugineum HOM05D003812 ORTHO05D004393 3.0e-138 496.5 610 47.0
FAN07G2723 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.1e-137 494.6 585 49.2
Potri.007G145000 Populus trichocarpa HOM05D003812 ORTHO05D004393 1.1e-137 494.6 523 50.7
Sed0027703 Sechium edule HOM05D003812 ORTHO05D004393 1.9e-137 493.8 617 45.9
FAN07G0162 Fragaria x ananassa HOM05D004444 ORTHO05D005246 2.1e-136 490.3 528 52.1
arahy.Tifrunner.gnm1.ann1.B1HR4A Arachis hypogaea HOM05D003812 ORTHO05D004393 3.6e-136 489.6 646 47.1
arahy.Tifrunner.gnm1.ann1.CNXN93 Arachis hypogaea HOM05D003812 ORTHO05D004393 3.6e-136 489.6 646 47.1
BcaB07g29910 Brassica carinata HOM05D003812 ORTHO05D004393 1.1e-135 488.0 625 45.3
CiPaw.01G201400 Carya illinoinensis HOM05D003812 ORTHO05D004393 2.3e-135 486.9 454 58.8
Aa31LG11G3700 Aethionema arabicum HOM05D003812 ORTHO05D004393 3.1e-135 486.5 614 47.4
Solyc12g011180.3 Solanum lycopersicum HOM05D003812 ORTHO05D004393 2.0e-134 483.8 507 51.1
BolC2t12085H Brassica oleracea HOM05D003812 ORTHO05D004393 2.2e-133 480.3 625 47.5
TAR636G0254 Trochodendron aralioides HOM05D003812 ORTHO05D004393 1.9e-132 477.2 268 96.6
A02p40330 Brassica napus HOM05D003812 ORTHO05D004393 9.2e-132 474.9 627 47.7
C02p60290 Brassica napus HOM05D003812 ORTHO05D004393 3.0e-130 469.9 619 46.8
BcaC03g17974 Brassica carinata HOM05D003812 ORTHO05D004393 6.6e-130 468.8 621 47.3
MBI16_g29049_MAGBIO Magnolia biondii HOM05D003812 ORTHO05D004393 4.3e-129 466.1 519 53.8
FAN17G2490 Fragaria x ananassa HOM05D004444 ORTHO05D005246 1.1e-127 461.5 527 50.1
BraA02t09001Z Brassica rapa HOM05D003812 ORTHO05D004393 6.8e-127 458.8 629 46.7
Nitab4.5_0003520g0020 Nicotiana tabacum HOM05D003812 ORTHO05D004393 1.5e-126 457.6 494 52.2
Peaxi162Scf00463g00428 Petunia axillaris HOM05D003812 ORTHO05D004393 7.5e-126 455.3 500 52.2
EL10Ac3g06164 Beta vulgaris HOM05D003812 ORTHO05D004393 9.9e-126 454.9 619 47.0
BcaB05g23118 Brassica carinata HOM05D003812 ORTHO05D004393 7.1e-124 448.7 613 42.4
BcaC09g49951 Brassica carinata HOM05D003812 ORTHO05D004393 1.6e-123 447.6 617 42.3
CDE05G0093 Ceratophyllum demersum HOM05D003812 ORTHO05D004393 3.3e-121 439.9 701 41.8
vmacro06691 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 9.9e-118 428.3 508 48.4
BcaC03g17970 Brassica carinata HOM05D003812 ORTHO05D004393 2.4e-116 423.7 615 43.3
HPP92_018576 Vanilla planifolia HOM05D003812 ORTHO05D004393 3.5e-115 419.9 635 43.6
Zm00001eb420200 Zea mays HOM05D003812 ORTHO05D004393 1.9e-113 414.1 620 41.3
AUR62023711 Chenopodium quinoa HOM05D003812 ORTHO05D004393 3.3e-113 413.3 516 48.1
unitig_37.g12590 Utricularia gibba HOM05D003812 ORTHO05D004393 3.4e-110 403.3 633 39.7
Aa31LG4G17960 Aethionema arabicum HOM05D003812 ORTHO05D004393 2.7e-107 393.7 622 40.7
Cc00_g24630 Coffea canephora HOM05D003812 ORTHO05D004393 4.3e-105 386.3 362 57.7
AUR62002481 Chenopodium quinoa HOM05D003812 ORTHO05D004393 1.1e-95 355.1 347 54.8
Nitab4.5_0000160g0140 Nicotiana tabacum HOM05D003812 ORTHO05D004393 4.0e-95 353.2 358 53.4
BcaB07g31049 Brassica carinata HOM05D003812 ORTHO05D004393 1.5e-94 351.3 439 45.1
Mapoly0019s0182 Marchantia polymorpha HOM05D003812 ORTHO05D004393 6.5e-93 345.9 471 42.0
RcHm_v2.0_Chr2g0084521 Rosa chinensis HOM05D003812 ORTHO05D004393 1.9e-92 344.4 356 53.1
Pp3c16_3240 Physcomitrium patens HOM05D003812 ORTHO05D004393 6.0e-91 339.3 535 39.1
FAN23G1808 Fragaria x ananassa HOM05D003812 ORTHO05D004393 1.8e-87 327.8 358 51.1
SMO367G0920 Selaginella moellendorffii HOM05D003812 ORTHO05D004393 4.5e-86 323.2 465 41.5
Hma1.2p1_0381F.1_g140050 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 1.6e-83 314.7 267 62.2
AagrBONN_evm.TU.Sc2ySwM_344.3654 Anthoceros agrestis HOM05D003812 ORTHO05D004393 4.5e-78 296.6 487 38.4
Ah.13g073180 Amaranthus hybridus HOM05D003812 ORTHO05D004393 6.1e-75 286.2 250 54.8
Lalb_Chr05g0212041 Lupinus albus HOM05D003812 ORTHO05D004393 3.3e-73 280.4 268 56.3
Lalb_Chr05g0212031 Lupinus albus HOM05D003812 ORTHO05D004393 2.0e-70 271.2 326 47.9
Sc13g0007550 Simmondsia chinensis HOM05D003812 ORTHO05D004393 2.2e-69 267.7 267 52.4
RcHm_v2.0_Chr2g0084531 Rosa chinensis HOM05D003812 ORTHO05D004393 3.9e-66 256.9 297 50.2
Hund12300 Selenicereus undatus HOM05D003812 ORTHO05D004393 1.1e-63 248.8 260 54.2
Haze_11132 Corylus avellana HOM05D003812 ORTHO05D004393 2.4e-63 247.7 356 44.9
BolC2t12088H Brassica oleracea HOM05D003812 ORTHO05D004393 1.5e-62 245.0 336 44.3
Carub.0005s1565 Capsella rubella HOM05D003812 ORTHO05D004393 5.9e-62 243.0 291 46.0
BcaB01g00718 Brassica carinata HOM05D003812 ORTHO05D004393 1.6e-59 235.0 329 42.9
Cc06_g19250 Coffea canephora HOM05D003812 ORTHO05D004393 1.0e-58 232.3 264 51.5
Hma1.2p1_0381F.1_g140060 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 3.2e-52 210.7 158 63.3
Carub.0005s1566 Capsella rubella HOM05D003812 ORTHO05D004393 4.2e-52 210.3 267 40.4
Oeu022463.3 Olea europaea HOM05D003812 ORTHO05D004393 3.4e-49 200.7 425 37.6
Cc06_g19240 Coffea canephora HOM05D003812 ORTHO05D004393 2.2e-48 198.0 133 67.7
CSS0023461 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.4e-47 194.5 185 58.4
Oeu064436.1 Olea europaea HOM05D003812 ORTHO05D004393 2.0e-46 191.4 185 59.5
CSS0048962 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 2.7e-46 191.0 185 57.8
Nn1g08161 Nelumbo nucifera HOM05D003812 ORTHO05D004393 5.9e-46 189.9 208 64.9
CSS0002491 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.7e-45 188.3 185 57.3
CSS0006626 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.7e-45 188.3 185 57.3
CSS0008525 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.7e-45 188.3 185 57.3
ATR0580G406 Amborella trichopoda HOM05D003812 ORTHO05D004393 2.2e-45 188.0 253 45.8
CSS0001518 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 3.8e-45 187.2 185 56.8
CSS0030669 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 1.5e-44 185.3 185 54.6
Nitab4.5_0001168g0120 Nicotiana tabacum HOM05D003812 ORTHO05D004393 2.8e-40 171.0 374 34.0
VMungo0251G1870 Vigna mungo HOM05D000140 ORTHO05D004393 8.3e-40 169.5 216 48.1
Ah.13g073190 Amaranthus hybridus HOM05D003812 ORTHO05D004393 2.9e-37 161.0 186 51.1
HanXRQChr17g0553321 Helianthus annuus HOM05D003812 ORTHO05D004393 6.1e-35 153.3 261 46.0
Hund12301 Selenicereus undatus HOM05D003812 ORTHO05D004393 5.2e-34 150.2 255 45.1
SEGI_23375 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 5.7e-33 146.7 192 47.9
Sc13g0007560 Simmondsia chinensis HOM05D003812 ORTHO05D004393 1.4e-31 142.1 183 49.2
VMungo1268G0001 Vigna mungo HOM05D003812 ORTHO05D004393 5.4e-31 140.2 230 43.0
ATR0580G030 Amborella trichopoda HOM05D003812 ORTHO05D004393 4.6e-30 137.1 268 36.2
CSS0036967 Camellia sinensis var. sinensis HOM05D003812 ORTHO05D004393 4.6e-30 137.1 185 48.6
SHI01261 Sapria himalayana HOM05D003812 ORTHO05D004393 1.5e-28 132.1 168 47.6
CBR_g26464 Chara braunii HOM05D003812 ORTHO05D004393 4.3e-28 130.6 618 23.6
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 1.8e-26 125.2 286 39.2
arahy.Tifrunner.gnm1.ann1.NBB910 Arachis hypogaea HOM05D003812 ORTHO05D004393 6.6e-21 106.7 103 51.5
arahy.Tifrunner.gnm1.ann1.05VQ85 Arachis hypogaea HOM05D003812 ORTHO05D004393 5.6e-20 103.6 79 62.0
arahy.Tifrunner.gnm1.ann1.C22IND Arachis hypogaea HOM05D003812 ORTHO05D004393 5.6e-20 103.6 97 51.5
arahy.Tifrunner.gnm1.ann1.WBRQ5K Arachis hypogaea HOM05D003812 ORTHO05D004393 5.6e-20 103.6 103 50.5
Haze_11133 Corylus avellana HOM05D003812 ORTHO05D004393 2.8e-19 101.3 153 43.1
Hund12275 Selenicereus undatus HOM05D003812 ORTHO05D004393 1.8e-18 98.6 211 44.5
Os01g0528000 Oryza sativa ssp. japonica HOM05D003812 ORTHO05D004393 3.1e-18 97.8 79 60.8
Hma1.2p1_0381F.1_g140070 Hydrangea macrophylla HOM05D003812 ORTHO05D004393 5.8e-17 93.6 187 38.0
vmacro06692 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 6.0e-14 83.6 81 60.5
SEGI_01468 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 3.0e-13 81.3 68 55.9
vmacro06690 Vaccinium macrocarpon HOM05D003812 ORTHO05D004393 1.9e-12 78.6 56 64.3
arahy.Tifrunner.gnm1.ann1.SF8VIF Arachis hypogaea HOM05D003812 ORTHO05D004393 9.5e-12 76.3 79 49.4
arahy.Tifrunner.gnm1.ann1.8MB3N8 Arachis hypogaea HOM05D003812 ORTHO05D004393 4.7e-11 73.9 83 45.8
Cc06_g19280 Coffea canephora HOM05D003812 ORTHO05D004393 4.4e-09 67.4 82 48.8
SEGI_03594 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 1.7e-08 65.5 45 66.7
Cc00_g35850 Coffea canephora HOM05D003812 ORTHO05D004393 2.9e-08 64.7 186 36.0
Sc25g0002350 Simmondsia chinensis HOM05D003812 ORTHO05D004393 1.1e-07 62.8 47 61.7
FAN20G1426 Fragaria x ananassa HOM05D003812 ORTHO05D004393 2.4e-07 61.6 135 38.5
PGSC0003DMG400007789 Solanum tuberosum HOM05D003812 ORTHO05D004393 5.4e-07 60.5 166 45.2
FAN15G1786 Fragaria x ananassa HOM05D003812 ORTHO05D004393 7.1e-07 60.1 39 64.1
SEGI_26047 Sequoiadendron giganteum HOM05D003812 ORTHO05D004393 1.6e-06 58.9 205 39.5
Cfa023757 Carpinus fangiana HOM05D003979 ORTHO05D005530 3.5e-06 57.8 413 21.8
MBI16_g47032_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 3.5e-06 57.8 55 60.0
FvH4_2g23680 Fragaria vesca HOM05D003812 ORTHO05D004393 7.8e-06 56.6 138 34.8


User provided reference genes

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