Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0320 Trochodendron aralioides HOM05D002260 ORTHO05D000476 1.6e-108 396.0 182 100.0
Migut.A00836 Erythranthe guttata HOM05D002260 ORTHO05D000476 1.9e-08 63.5 74 48.6
TAR629G2104 Trochodendron aralioides HOM05D002260 ORTHO05D000476 1.9e-08 63.5 74 50.0
arahy.Tifrunner.gnm1.ann1.2B8SX0 Arachis hypogaea HOM05D002260 ORTHO05D000476 4.2e-08 62.4 79 45.6
Gohir.A03G011700 Gossypium hirsutum HOM05D002260 ORTHO05D000476 4.2e-08 62.4 74 48.6
Nitab4.5_0001281g0020 Nicotiana tabacum HOM05D002260 ORTHO05D000476 4.2e-08 62.4 46 56.5
COL.COLO4_23876 Corchorus olitorius HOM05D002260 ORTHO05D000476 7.1e-08 61.6 103 39.8
TAR636G2587 Trochodendron aralioides HOM05D002260 ORTHO05D000476 7.1e-08 61.6 74 47.3
Actinidia05172 Actinidia chinensis HOM05D002260 ORTHO05D000476 1.2e-07 60.8 103 37.9
Nn1g01253 Nelumbo nucifera HOM05D002260 ORTHO05D000476 1.6e-07 60.5 74 45.9
Atru.chr4.1107 Acer truncatum HOM05D002260 ORTHO05D000476 2.1e-07 60.1 75 45.3
Atru.chr4.1110 Acer truncatum HOM05D002260 ORTHO05D000476 2.1e-07 60.1 75 45.3
Nitab4.5_0010237g0030 Nicotiana tabacum HOM05D002260 ORTHO05D000476 2.1e-07 60.1 107 36.4
HPP92_000515 Vanilla planifolia HOM05D002260 ORTHO05D000476 2.1e-07 60.1 105 36.2
Atru.chr9.1435 Acer truncatum HOM05D002260 ORTHO05D000476 2.7e-07 59.7 74 45.9
vmacro14040 Vaccinium macrocarpon HOM05D002260 ORTHO05D000476 2.7e-07 59.7 74 45.9
Dinv37761 Davidia involucrata HOM05D002260 ORTHO05D000476 3.5e-07 59.3 74 45.9
Sc01g0009210 Simmondsia chinensis HOM05D002260 ORTHO05D000476 3.5e-07 59.3 105 37.1
SGA_v2.0_scaffold120G32813 Striga asiatica HOM05D002260 ORTHO05D000476 3.5e-07 59.3 74 47.3
arahy.Tifrunner.gnm1.ann1.D5HFJ9 Arachis hypogaea HOM05D002260 ORTHO05D000476 4.6e-07 58.9 74 45.9
arahy.Tifrunner.gnm1.ann1.RFG747 Arachis hypogaea HOM05D002260 ORTHO05D000476 6.0e-07 58.5 72 45.8
CiPaw.12G104600 Carya illinoinensis HOM05D002260 ORTHO05D000476 6.0e-07 58.5 74 45.9
Lj4g0010570 Lotus japonicus HOM05D002260 ORTHO05D000476 6.0e-07 58.5 74 45.9
Potri.003G115400 Populus trichocarpa HOM05D002260 ORTHO05D000476 6.0e-07 58.5 74 45.9
Solyc08g079500.3 Solanum lycopersicum HOM05D002260 ORTHO05D000476 6.0e-07 58.5 74 45.9
Sopen08g027870 Solanum pennellii HOM05D002260 ORTHO05D000476 6.0e-07 58.5 74 45.9
PGSC0003DMG400003933 Solanum tuberosum HOM05D002260 ORTHO05D000476 6.0e-07 58.5 74 45.9
SGA_v2.0_scaffold146G36184 Striga asiatica HOM05D002260 ORTHO05D000476 6.0e-07 58.5 74 45.9
AUR62010514 Chenopodium quinoa HOM05D002260 ORTHO05D000476 7.9e-07 58.2 74 44.6
AUR62017388 Chenopodium quinoa HOM05D002260 ORTHO05D000476 7.9e-07 58.2 74 44.6
Ciclev10020784m.g Citrus clementina HOM05D002260 ORTHO05D000476 7.9e-07 58.2 75 42.7
Gohir.D03G158200 Gossypium hirsutum HOM05D002260 ORTHO05D000476 7.9e-07 58.2 74 45.9
Gorai.003G166700 Gossypium raimondii HOM05D002260 ORTHO05D000476 7.9e-07 58.2 74 45.9
Lalb_Chr05g0225381 Lupinus albus HOM05D002260 ORTHO05D000476 7.9e-07 58.2 74 44.6
MD07G1121800 Malus domestica HOM05D002260 ORTHO05D000476 7.9e-07 58.2 107 34.6
Medtr4g102250 Medicago truncatula HOM05D002260 ORTHO05D000476 7.9e-07 58.2 74 44.6
Nitab4.5_0003534g0080 Nicotiana tabacum HOM05D002260 ORTHO05D000476 7.9e-07 58.2 106 38.7
Peaxi162Scf00271g00122 Petunia axillaris HOM05D002260 ORTHO05D000476 7.9e-07 58.2 115 33.9
Atru.chr4.1111 Acer truncatum HOM05D002260 ORTHO05D000476 1.0e-06 57.8 75 44.0
arahy.Tifrunner.gnm1.ann1.FH7HBW Arachis hypogaea HOM05D002260 ORTHO05D000476 1.0e-06 57.8 74 44.6
BcaNung01677 Brassica carinata HOM05D002260 ORTHO05D000476 1.0e-06 57.8 101 38.6
Gohir.A11G020600 Gossypium hirsutum HOM05D002260 ORTHO05D000476 1.0e-06 57.8 74 45.9
Manes.05G046200 Manihot esculenta HOM05D002260 ORTHO05D000476 1.0e-06 57.8 75 44.0
Nn4g26379 Nelumbo nucifera HOM05D002260 ORTHO05D000476 1.0e-06 57.8 72 45.8
GSVIVG01004908001 Vitis vinifera HOM05D002260 ORTHO05D000476 1.0e-06 57.8 74 44.6
EL10Ac5g12618 Beta vulgaris HOM05D002260 ORTHO05D000476 1.3e-06 57.4 74 44.6
CANSAT56G1374 Cannabis sativa HOM05D002260 ORTHO05D000476 1.3e-06 57.4 100 38.0
Cfa012018 Carpinus fangiana HOM05D002260 ORTHO05D000476 1.3e-06 57.4 74 43.2
Cc02_g23930 Coffea canephora HOM05D002260 ORTHO05D000476 1.3e-06 57.4 75 42.7
MBI12_g34010_MAGBIO Magnolia biondii HOM05D002260 ORTHO05D000476 1.3e-06 57.4 72 45.8
Phvul.003G215200 Phaseolus vulgaris HOM05D002260 ORTHO05D000476 1.3e-06 57.4 74 43.2
CAN.G630.79 Capsicum annuum HOM05D002260 ORTHO05D000476 1.8e-06 57.0 107 35.5
Cfa001735 Carpinus fangiana HOM05D002260 ORTHO05D000476 1.8e-06 57.0 75 41.3
Duzib084G1438 Durio zibethinus HOM05D002260 ORTHO05D000476 1.8e-06 57.0 74 45.9
Duzib205G0587 Durio zibethinus HOM05D002260 ORTHO05D000476 1.8e-06 57.0 74 45.9
FAN06G5019 Fragaria x ananassa HOM05D002260 ORTHO05D000476 1.8e-06 57.0 90 37.8
Lalb_Chr16g0389621 Lupinus albus HOM05D002260 ORTHO05D000476 1.8e-06 57.0 74 44.6
RcHm_v2.0_Chr1g0350241 Rosa chinensis HOM05D002260 ORTHO05D000476 1.8e-06 57.0 75 42.7
Sp7g20770 Schrenkiella parvula HOM05D002260 ORTHO05D000476 1.8e-06 57.0 72 45.8
THA.LOC104813900 Tarenaya hassleriana HOM05D002260 ORTHO05D000476 1.8e-06 57.0 100 39.0
MSTRG.12058 Avicennia marina HOM05D002260 ORTHO05D000476 2.3e-06 56.6 74 45.9
Haze_09051 Corylus avellana HOM05D002260 ORTHO05D000476 2.3e-06 56.6 74 43.2
FvH4_7g11720 Fragaria vesca HOM05D002260 ORTHO05D000476 2.3e-06 56.6 75 41.3
FAN01G0762 Fragaria x ananassa HOM05D002260 ORTHO05D000476 2.3e-06 56.6 75 41.3
MD02G1205300 Malus domestica HOM05D002260 ORTHO05D000476 2.3e-06 56.6 75 42.7
PGR031G1082 Punica granatum HOM05D002260 ORTHO05D000476 2.3e-06 56.6 74 44.6
Thecc.01G377500 Theobroma cacao HOM05D002260 ORTHO05D000476 2.3e-06 56.6 104 38.5
EL10Ac1g00884 Beta vulgaris HOM05D002260 ORTHO05D000476 3.0e-06 56.2 81 42.0
CDE12G0525 Ceratophyllum demersum HOM05D002260 ORTHO05D000476 3.0e-06 56.2 74 44.6
AUR62004209 Chenopodium quinoa HOM05D002260 ORTHO05D000476 3.0e-06 56.2 97 40.2
AUR62013639 Chenopodium quinoa HOM05D002260 ORTHO05D000476 3.0e-06 56.2 97 40.2
Cc08_g13260 Coffea canephora HOM05D002260 ORTHO05D000476 3.0e-06 56.2 74 44.6
MELO3C013988.2 Cucumis melo HOM05D002260 ORTHO05D000476 3.0e-06 56.2 81 43.2
Nitab4.5_0007860g0010 Nicotiana tabacum HOM05D002260 ORTHO05D000476 3.0e-06 56.2 88 35.2
PSO782G4814 Papaver somniferum HOM05D002260 ORTHO05D000476 3.0e-06 56.2 73 43.8
Potri.001G117400 Populus trichocarpa HOM05D002260 ORTHO05D000476 3.0e-06 56.2 74 44.6
Rhsim07G0101300 Rhododendron simsii HOM05D002260 ORTHO05D000476 3.0e-06 56.2 74 44.6
Thecc.03G262100 Theobroma cacao HOM05D002260 ORTHO05D000476 3.0e-06 56.2 74 44.6
TPR.G37659 Trifolium pratense HOM05D002260 ORTHO05D000476 3.0e-06 56.2 74 43.2
Aqoxy7G00642 Aquilegia oxysepala HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 43.2
AT4G22740 Arabidopsis thaliana HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 44.6
CSS0016239 Camellia sinensis var. sinensis HOM05D002260 ORTHO05D000476 3.9e-06 55.8 75 40.0
CSS0026380 Camellia sinensis var. sinensis HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 44.6
CSS0048208 Camellia sinensis var. sinensis HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 44.6
CANSAT21G2004 Cannabis sativa HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 43.2
Dinv39075 Davidia involucrata HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 44.6
Duzib068G0431 Durio zibethinus HOM05D002260 ORTHO05D000476 3.9e-06 55.8 100 39.0
FAN06G3140 Fragaria x ananassa HOM05D002260 ORTHO05D000476 3.9e-06 55.8 71 42.3
Gohir.D11G020300 Gossypium hirsutum HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 44.6
Gorai.007G021600 Gossypium raimondii HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 44.6
MD04G1079300 Malus domestica HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 44.6
Oeu040235.1 Olea europaea HOM05D002260 ORTHO05D000476 3.9e-06 55.8 89 39.3
VMungo1215G3180 Vigna mungo HOM05D002260 ORTHO05D000476 3.9e-06 55.8 74 43.2
Zm00001eb377910 Zea mays HOM05D002260 ORTHO05D000476 3.9e-06 55.8 75 41.3
FAN10G1247 Fragaria x ananassa HOM05D002260 ORTHO05D000476 5.1e-06 55.5 71 43.7
Prupe.5G079800 Prunus persica HOM05D002260 ORTHO05D000476 5.1e-06 55.5 74 43.2
Ciclev10024304m.g Citrus clementina HOM05D002260 ORTHO05D000476 6.7e-06 55.1 74 43.2
CsaV3_3G003220 Cucumis sativus L. HOM05D002260 ORTHO05D000476 6.7e-06 55.1 72 44.4
FAN10G3219 Fragaria x ananassa HOM05D002260 ORTHO05D000476 6.7e-06 55.1 71 42.3
Glyma.05G053000 Glycine max HOM05D002260 ORTHO05D000476 6.7e-06 55.1 74 43.2
Potri.014G069100 Populus trichocarpa HOM05D002260 ORTHO05D000476 6.7e-06 55.1 75 41.3
Prupe.2G144400 Prunus persica HOM05D002260 ORTHO05D000476 6.7e-06 55.1 75 41.3
Solyc01g091270.3 Solanum lycopersicum HOM05D002260 ORTHO05D000476 6.7e-06 55.1 101 32.7
Sopen01g037020 Solanum pennellii HOM05D002260 ORTHO05D000476 6.7e-06 55.1 101 32.7
TWI23G0991 Tripterygium wilfordii HOM05D002260 ORTHO05D000476 6.7e-06 55.1 102 35.3
Carub.0007s1857 Capsella rubella HOM05D002260 ORTHO05D000476 8.7e-06 54.7 74 43.2
Cfa001738 Carpinus fangiana HOM05D002260 ORTHO05D000476 8.7e-06 54.7 75 40.0
Ca_12281_v3 Cicer arietinum L. HOM05D002260 ORTHO05D007051 8.7e-06 54.7 74 41.9
ECA236G0237 Erigeron canadensis HOM05D002260 ORTHO05D000476 8.7e-06 54.7 75 40.0
Thhalv10025744m.g Eutrema salsugineum HOM05D002260 ORTHO05D000476 8.7e-06 54.7 72 44.4
FAN18G1109 Fragaria x ananassa HOM05D002260 ORTHO05D000476 8.7e-06 54.7 73 43.8
Psat4g068560 Pisum sativum HOM05D002260 ORTHO05D000476 8.7e-06 54.7 74 41.9
Hund28688 Selenicereus undatus HOM05D002260 ORTHO05D000476 8.7e-06 54.7 74 43.2
Hund28690 Selenicereus undatus HOM05D002260 ORTHO05D000476 8.7e-06 54.7 74 43.2
SGA_v2.0_scaffold153G37002 Striga asiatica HOM05D002260 ORTHO05D000476 8.7e-06 54.7 102 33.3


User provided reference genes

Program Settings