Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 0.0e+00 1940.6 986 100.0
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 0.0e+00 1477.6 1008 77.3
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 0.0e+00 1167.1 1033 60.3
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 0.0e+00 1138.3 1013 61.9
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 1.1e-309 1066.6 969 60.5
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 2.6e-298 1028.9 1001 57.5
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 2.2e-297 1025.8 991 57.3
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 3.8e-297 1025.0 1005 58.3
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 3.2e-296 1021.9 1018 57.3
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 1.4e-291 1006.5 1019 56.2
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 3.4e-290 1001.9 1019 56.1
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 2.7e-287 992.3 1001 55.9
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 4.8e-284 981.5 1006 55.0
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 1.5e-282 976.5 1004 55.1
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 1.5e-282 976.5 1000 56.0
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 2.5e-280 969.1 999 55.7
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 6.7e-278 961.1 1021 53.4
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 9.7e-277 957.2 1013 55.3
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 4.8e-276 954.9 998 54.9
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.3e-273 946.8 997 54.2
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 1.1e-272 943.7 1010 54.6
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.9e-272 943.0 990 54.6
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 2.5e-272 942.6 1001 55.0
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 3.0e-270 935.6 1014 53.3
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 4.0e-270 935.3 990 55.2
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 3.3e-269 932.2 993 55.0
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 4.4e-269 931.8 996 54.6
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 2.2e-268 929.5 943 55.8
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 1.4e-267 926.8 994 53.3
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 9.1e-267 924.1 993 53.7
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 9.1e-267 924.1 1001 54.0
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.2e-266 923.7 994 53.7
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 2.2e-265 919.5 989 54.7
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 2.9e-265 919.1 1006 54.2
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 5.0e-265 918.3 1004 54.0
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 3.2e-264 915.6 993 53.8
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 4.2e-264 915.2 1005 53.2
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 8.0e-263 911.0 1111 50.0
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 8.8e-262 907.5 989 53.7
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 9.8e-261 904.0 1004 52.2
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 2.2e-260 902.9 1004 51.3
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 2.8e-260 902.5 1004 51.1
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 8.3e-260 901.0 998 53.4
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 1.1e-259 900.6 1002 51.4
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 1.4e-259 900.2 1156 48.5
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 1.6e-258 896.7 1009 52.4
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 2.7e-258 896.0 992 53.4
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 4.5e-258 895.2 1018 51.3
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 4.5e-258 895.2 981 53.2
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 2.9e-257 892.5 1003 51.9
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 1.1e-256 890.6 992 53.0
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 1.5e-256 890.2 1009 50.5
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 3.2e-256 889.0 1000 52.6
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 4.2e-256 888.6 1051 50.4
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 4.2e-256 888.6 1046 50.3
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 5.5e-256 888.3 1036 50.6
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 9.4e-256 887.5 995 52.6
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 1.6e-255 886.7 1046 50.5
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 1.7e-252 876.7 1009 51.8
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 2.2e-252 876.3 985 52.1
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 4.9e-252 875.2 719 62.7
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 5.4e-251 871.7 992 51.8
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 5.4e-251 871.7 998 51.0
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 2.9e-249 865.9 1106 46.6
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 2.8e-247 859.4 1034 50.5
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 2.0e-245 853.2 1005 49.3
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 5.7e-245 851.7 1049 50.1
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 5.7e-245 851.7 1050 47.9
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 5.4e-243 845.1 1015 50.7
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 2.0e-242 843.2 1002 50.1
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 2.7e-242 842.8 939 54.0
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 1.7e-241 840.1 998 50.7
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 1.6e-239 833.6 1013 49.6
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 4.0e-238 828.9 990 48.7
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 8.3e-236 821.2 1010 49.2
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 2.3e-233 813.1 1000 48.4
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 5.0e-233 812.0 994 49.3
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 8.6e-233 811.2 1003 48.9
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 8.9e-230 801.2 1003 48.8
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 9.8e-229 797.7 999 48.7
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 2.9e-228 796.2 1006 48.4
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 6.4e-228 795.0 1004 48.3
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 7.1e-227 791.6 1000 47.9
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 9.2e-227 791.2 1005 48.8
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 1.2e-226 790.8 1006 49.0
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 4.3e-224 782.3 725 57.8
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 1.4e-222 777.3 1001 47.6
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 2.3e-222 776.5 725 57.4
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 2.0e-221 773.5 1001 47.2
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 2.2e-220 770.0 990 46.6
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 3.2e-219 766.1 678 59.0
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 6.2e-215 751.9 1015 46.2
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 1.1e-214 751.1 998 47.2
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 5.8e-213 745.3 995 47.0
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 6.4e-212 741.9 998 47.2
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 1.2e-210 737.6 668 56.4
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 3.5e-210 736.1 995 47.3
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 4.6e-210 735.7 672 56.7
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 1.3e-209 734.2 669 57.1
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 1.1e-208 731.1 987 46.8
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 3.3e-208 729.6 1017 45.7
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 7.3e-208 728.4 690 56.1
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 1.6e-207 727.2 711 56.7
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 4.0e-206 722.6 992 46.7
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 2.0e-205 720.3 675 57.3
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 3.4e-205 719.5 757 52.2
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 4.5e-205 719.2 671 56.3
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 7.6e-205 718.4 1019 45.8
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 2.9e-204 716.5 706 54.5
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 1.9e-203 713.8 996 44.8
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 3.9e-201 706.1 677 54.4
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.1e-200 704.5 1024 44.2
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 3.6e-199 699.5 679 53.6
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 4.0e-198 696.0 1030 43.3
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 2.9e-196 689.9 1069 42.1
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 1.2e-170 604.7 695 48.2
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 1.6e-170 604.4 1024 39.7
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 2.3e-153 547.4 712 46.5
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 1.2e-149 535.0 762 46.5
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 4.9e-127 459.9 669 41.4
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 1.9e-107 394.8 306 60.8
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 2.8e-106 391.0 513 39.0
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 3.0e-100 370.9 776 33.9
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 5.1e-100 370.2 489 39.1
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 3.9e-92 344.0 455 40.9
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.2e-40 172.9 115 68.7
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 4.7e-37 161.0 115 67.0
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 1.0e-31 143.3 376 27.7
CiPaw.06G041800 Carya illinoinensis HOM05D005408 ORTHO05D006790 4.7e-29 134.4 372 37.4
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 1.8e-25 122.5 185 41.1
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 5.0e-23 114.4 146 48.6
C04p41430 Brassica napus HOM05D005408 ORTHO05D006790 3.3e-14 85.1 151 39.7
BolC4t25724H Brassica oleracea HOM05D005408 ORTHO05D006790 4.3e-14 84.7 151 39.7
A04p07780 Brassica napus HOM05D005408 ORTHO05D006790 4.0e-12 78.2 83 55.4
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 4.0e-12 78.2 102 45.1
BcaC02g09333 Brassica carinata HOM05D005408 ORTHO05D006790 4.4e-11 74.7 84 53.6
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 1.7e-10 72.8 102 44.1


User provided reference genes

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