Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.0e-63 246.5 121 100.0
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.9e-25 119.4 109 53.2
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.8e-23 110.9 106 54.7
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 4.4e-22 108.2 115 52.2
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 1.0e-18 97.1 109 49.5
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 2.3e-18 95.9 110 47.3
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 6.6e-18 94.4 111 46.8
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 8.6e-18 94.0 88 55.7
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.5e-17 93.2 112 46.4
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.5e-17 93.2 112 46.4
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 7.3e-17 90.9 95 49.5
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 9.5e-17 90.5 107 46.7
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 3.6e-16 88.6 109 44.0
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 6.2e-16 87.8 93 49.5
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 1.8e-15 86.3 95 51.6
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 1.8e-15 86.3 109 45.0
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 4.0e-15 85.1 107 44.9
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 5.2e-15 84.7 109 46.8
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 6.8e-15 84.3 108 44.4
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 6.8e-15 84.3 105 42.9
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 3.4e-14 82.0 111 43.2
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 3.4e-14 82.0 106 41.5
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 5.8e-14 81.3 112 43.8
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 7.5e-14 80.9 97 42.3
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 1.3e-13 80.1 89 46.1
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 2.2e-13 79.3 109 45.9
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 2.9e-13 79.0 105 43.8
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 3.7e-13 78.6 89 49.4
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 4.9e-13 78.2 108 45.4
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 1.1e-12 77.0 107 43.9
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 1.1e-12 77.0 106 37.7
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 1.4e-12 76.6 83 47.0
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 1.4e-12 76.6 71 52.1
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 2.4e-12 75.9 105 41.9
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 2.4e-12 75.9 105 41.9
Cpa.g.sc8.168 Carica papaya HOM05D006020 ORTHO05D007665 4.1e-12 75.1 110 40.9
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 5.4e-12 74.7 105 39.0
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 5.4e-12 74.7 104 43.3
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 1.2e-11 73.6 106 37.7
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 1.6e-11 73.2 83 45.8
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 2.1e-11 72.8 105 41.0
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 2.1e-11 72.8 77 49.4
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 6.0e-11 71.2 105 38.1
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 1.7e-10 69.7 105 37.1
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 3.0e-10 68.9 105 40.0
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 3.9e-10 68.6 90 44.4
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 3.9e-10 68.6 88 42.0
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 6.6e-10 67.8 83 44.6
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 1.1e-09 67.0 99 44.4
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 1.1e-09 67.0 97 42.3
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 1.1e-09 67.0 101 31.7
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 1.1e-09 67.0 109 40.4
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 1.5e-09 66.6 97 42.3
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 1.5e-09 66.6 95 37.9
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 3.3e-09 65.5 85 43.5
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 5.6e-09 64.7 78 44.9
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 5.6e-09 64.7 86 41.9
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 7.3e-09 64.3 73 46.6
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 1.6e-08 63.2 77 41.6
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 2.8e-08 62.4 97 40.2
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 3.6e-08 62.0 75 48.0
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 3.6e-08 62.0 81 39.5
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 3.6e-08 62.0 94 38.3
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 4.7e-08 61.6 77 40.3
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 4.7e-08 61.6 71 40.8
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 4.7e-08 61.6 84 39.3
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 6.2e-08 61.2 73 49.3
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 6.2e-08 61.2 82 41.5
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 8.1e-08 60.8 67 44.8
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 8.1e-08 60.8 87 37.9
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 2.3e-07 59.3 107 34.6
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 2.3e-07 59.3 95 37.9
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 3.1e-07 58.9 89 39.3
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 4.0e-07 58.5 87 37.9
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 6.8e-07 57.8 85 38.8
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 6.8e-07 57.8 77 37.7
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 8.9e-07 57.4 70 41.4
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 8.9e-07 57.4 50 48.0
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 1.2e-06 57.0 89 38.2
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 1.2e-06 57.0 89 38.2
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.2e-06 57.0 50 48.0
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 1.2e-06 57.0 57 49.1
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 1.5e-06 56.6 62 43.5
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 1.5e-06 56.6 69 44.9
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 1.5e-06 56.6 54 46.3
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 2.0e-06 56.2 108 36.1
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 2.0e-06 56.2 108 36.1
BcaB07g30044 Brassica carinata HOM05D006020 ORTHO05D007665 2.0e-06 56.2 52 51.9
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 2.0e-06 56.2 56 42.9
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 3.4e-06 55.5 83 42.2
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 4.4e-06 55.1 61 42.6
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 5.8e-06 54.7 110 36.4


User provided reference genes

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