Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 1.3e-39 166.0 85 100.0
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 1.2e-26 122.9 90 73.3
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.8e-17 92.4 90 62.2
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 3.0e-17 91.7 93 57.0
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.4e-14 82.0 90 57.8
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 3.1e-14 81.6 92 47.8
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 4.1e-14 81.3 87 50.6
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.3e-12 76.3 87 48.3
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 1.3e-12 76.3 87 48.3
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 2.2e-12 75.5 83 51.8
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 8.5e-12 73.6 95 51.6
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 8.5e-12 73.6 87 46.0
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 1.1e-11 73.2 84 50.0
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.4e-11 72.8 92 52.2
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.9e-11 72.4 84 46.4
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 3.2e-11 71.6 84 48.8
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 3.2e-11 71.6 84 48.8
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 4.2e-11 71.2 89 48.3
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 4.2e-11 71.2 89 48.3
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 5.5e-11 70.9 84 47.6
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 5.5e-11 70.9 84 47.6
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 5.5e-11 70.9 89 47.2
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 7.2e-11 70.5 85 47.1
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 1.2e-10 69.7 93 47.3
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 1.2e-10 69.7 93 47.3
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 1.2e-10 69.7 88 45.5
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.1e-10 68.9 84 47.6
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 2.1e-10 68.9 89 47.2
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.7e-10 68.6 85 45.9
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 2.7e-10 68.6 87 50.6
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 4.6e-10 67.8 75 50.7
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 4.6e-10 67.8 75 50.7
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 4.6e-10 67.8 75 50.7
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 4.6e-10 67.8 75 50.7
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 4.6e-10 67.8 75 50.7
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 4.6e-10 67.8 75 50.7
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 4.6e-10 67.8 75 50.7
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 4.6e-10 67.8 75 50.7
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 7.9e-10 67.0 87 47.1
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 1.0e-09 66.6 75 50.7
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 1.8e-09 65.9 85 45.9
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 3.9e-09 64.7 93 45.2
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 3.9e-09 64.7 93 45.2
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 5.1e-09 64.3 79 50.6
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 5.1e-09 64.3 88 40.9
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-09 64.3 75 49.3
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 5.1e-09 64.3 85 42.4
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 8.8e-09 63.5 85 43.5
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 2.5e-08 62.0 89 48.3
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 3.3e-08 61.6 89 48.3
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 7.4e-08 60.5 92 42.4
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 7.4e-08 60.5 93 43.0
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 9.7e-08 60.1 88 44.3
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 9.7e-08 60.1 88 44.3
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 1.3e-07 59.7 70 48.6
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.3e-07 59.7 89 46.1
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 2.8e-07 58.5 63 54.0
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 2.8e-07 58.5 89 46.1
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 6.3e-07 57.4 82 46.3
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 1.4e-06 56.2 89 42.7
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 1.4e-06 56.2 96 41.7
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 1.4e-06 56.2 70 44.3
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 1.4e-06 56.2 106 36.8
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 1.8e-06 55.8 106 38.7
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 1.8e-06 55.8 90 41.1
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 2.4e-06 55.5 90 41.1
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 2.4e-06 55.5 90 41.1
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 5.3e-06 54.3 85 40.0


User provided reference genes

Program Settings