Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 1.5e-237 825.9 430 100.0
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 3.0e-158 562.4 421 68.9
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 1.4e-150 537.0 425 65.9
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 2.8e-143 512.7 427 62.8
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 2.6e-141 506.1 425 59.8
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 2.4e-139 499.6 416 62.5
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 1.1e-136 490.7 431 58.9
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 8.0e-135 484.6 421 61.0
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 2.6e-133 479.6 425 58.4
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.7e-132 476.9 425 57.6
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.2e-130 470.7 425 57.6
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 6.0e-130 468.4 424 57.8
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 1.7e-129 466.8 421 57.0
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 2.5e-128 463.0 389 60.4
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 8.1e-127 458.0 424 58.5
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 6.4e-124 448.4 452 53.8
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 6.0e-122 441.8 426 56.8
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 1.3e-121 440.7 557 47.0
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 8.6e-121 438.0 415 55.4
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 1.9e-120 436.8 544 47.6
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 2.1e-119 433.3 416 56.2
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 6.2e-119 431.8 411 55.0
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 4.0e-118 429.1 418 54.8
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 2.9e-116 422.9 449 51.9
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 3.8e-116 422.5 426 53.8
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 7.1e-115 418.3 435 53.3
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 3.0e-113 412.9 369 58.5
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 4.3e-112 409.1 410 53.7
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 2.8e-111 406.4 409 54.5
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 4.8e-111 405.6 417 52.0
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 3.4e-109 399.4 410 50.2
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 5.8e-109 398.7 427 52.9
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 6.4e-108 395.2 518 45.4
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 1.4e-107 394.0 418 51.9
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 2.7e-106 389.8 426 51.6
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 4.6e-106 389.0 417 49.2
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 1.0e-105 387.9 428 50.7
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 3.0e-105 386.3 411 50.4
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 5.1e-105 385.6 418 49.3
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 9.6e-104 381.3 423 49.2
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 2.8e-103 379.8 417 49.6
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 2.8e-103 379.8 425 48.7
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 4.8e-103 379.0 410 52.9
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 2.4e-102 376.7 422 47.2
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 2.6e-101 373.2 395 53.2
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 2.6e-101 373.2 404 47.8
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 9.9e-101 371.3 444 49.3
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.3e-100 370.9 444 49.3
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 6.4e-100 368.6 435 47.4
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 9.3e-99 364.8 437 48.1
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 9.3e-99 364.8 426 49.5
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 9.3e-99 364.8 403 48.1
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.6e-98 364.0 408 48.8
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 2.1e-98 363.6 381 50.4
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 2.7e-98 363.2 403 47.9
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 7.9e-98 361.7 436 47.0
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 1.0e-97 361.3 408 50.0
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 1.3e-97 360.9 414 47.8
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 1.8e-97 360.5 435 46.7
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 6.7e-97 358.6 428 46.0
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 2.5e-96 356.7 442 45.7
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 7.4e-96 355.1 363 51.2
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 1.3e-95 354.4 409 49.9
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 1.6e-95 354.0 363 51.8
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 2.8e-95 353.2 411 50.9
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 8.1e-95 351.7 442 45.9
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 5.3e-94 349.0 350 51.7
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 1.0e-92 344.7 387 49.1
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 2.9e-92 343.2 355 51.0
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 3.8e-92 342.8 257 68.9
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 1.1e-91 341.3 362 53.3
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 5.5e-91 339.0 399 46.1
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 7.1e-91 338.6 408 46.1
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 9.3e-91 338.2 551 40.1
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 1.2e-90 337.8 257 68.5
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 4.6e-90 335.9 435 43.7
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 9.6e-88 328.2 385 48.6
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 5.8e-85 318.9 405 44.4
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 1.3e-84 317.8 412 42.0
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 5.0e-84 315.8 388 46.4
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 6.7e-81 305.4 404 43.3
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 1.5e-80 304.3 379 46.4
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 1.6e-79 300.8 410 41.2
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 3.1e-78 296.6 413 40.9
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 1.7e-76 290.8 397 43.6
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 1.4e-75 287.7 411 40.4
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 1.4e-75 287.7 411 40.4
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.6e-74 284.3 290 53.1
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 3.0e-73 280.0 350 45.7
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 6.7e-73 278.9 404 40.8
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 7.2e-67 258.8 291 48.5
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 2.1e-66 257.3 389 43.4
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 1.4e-65 254.6 414 39.4
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 1.8e-57 227.6 310 44.5
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 2.3e-57 227.3 248 50.8
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 2.2e-55 220.7 170 62.4
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 4.1e-54 216.5 203 53.7
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 5.3e-54 216.1 318 43.7
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 7.0e-54 215.7 255 47.1
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 2.0e-53 214.2 318 43.4
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 1.3e-52 211.5 255 47.1
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.7e-52 211.1 303 43.6
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 2.9e-52 210.3 262 48.9
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 5.5e-51 206.1 282 43.6
TPR.G24162 Trifolium pratense HOM05D006138 ORTHO05D007778 4.7e-50 203.0 233 46.4
Oeu025032.1 Olea europaea HOM05D006138 ORTHO05D007778 4.5e-45 186.4 138 67.4
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 7.7e-45 185.7 168 60.1
Duzib268G1255 Durio zibethinus HOM05D006138 ORTHO05D007778 4.2e-43 179.9 145 61.4
Zm00001eb085830 Zea mays HOM05D006138 ORTHO05D007778 1.3e-39 168.3 423 30.3
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 7.2e-35 152.5 275 39.6
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.2e-29 135.2 253 36.0
RcHm_v2.0_Chr4g0414071 Rosa chinensis HOM05D006138 ORTHO05D007778 8.0e-26 122.5 126 54.8
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 4.4e-24 116.7 149 45.0
Duzib268G0147 Durio zibethinus HOM05D006138 ORTHO05D007778 3.2e-22 110.5 121 47.9
Actinidia16488 Actinidia chinensis HOM05D006138 ORTHO05D007778 7.0e-22 109.4 85 64.7
Hund29337 Selenicereus undatus HOM05D006138 ORTHO05D007778 3.4e-16 90.5 123 40.7
Hund29338 Selenicereus undatus HOM05D006138 ORTHO05D007778 3.4e-16 90.5 123 40.7
FAN17G0457 Fragaria x ananassa HOM05D006138 ORTHO05D007778 2.2e-15 87.8 137 40.1
Phvul.001G135400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 1.0e-12 79.0 99 41.4
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 2.8e-10 70.9 76 46.1
CSS0037607 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 2.3e-09 67.8 56 58.9
RcHm_v2.0_Chr4g0419401 Rosa chinensis HOM05D006138 ORTHO05D007778 2.6e-08 64.3 94 41.5
Sabra17G0071800 Salix brachista HOM05D006138 ORTHO05D007778 2.6e-08 64.3 86 45.3


User provided reference genes

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