Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0159 Trochodendron aralioides HOM05D002556 ORTHO05D003153 5.5e-99 364.4 195 100.0
TAR636G3468 Trochodendron aralioides HOM05D002556 ORTHO05D003153 9.9e-48 194.1 192 59.9
TAR636G2261 Trochodendron aralioides HOM05D002556 ORTHO05D003153 8.4e-39 164.5 165 58.2
Dinv38335 Davidia involucrata HOM05D002556 ORTHO05D003153 1.9e-30 136.7 191 46.6
Nn3g21259 Nelumbo nucifera HOM05D002556 ORTHO05D003153 2.4e-30 136.3 192 52.6
Nn3g21262 Nelumbo nucifera HOM05D002556 ORTHO05D003153 2.4e-30 136.3 192 52.6
Dinv44438 Davidia involucrata HOM05D002556 ORTHO05D003153 7.1e-30 134.8 190 47.4
Duzib212G1036 Durio zibethinus HOM05D002556 ORTHO05D003153 9.9e-24 114.4 171 42.7
Thecc.04G275500 Theobroma cacao HOM05D002556 ORTHO05D003153 6.4e-23 111.7 174 46.0
Gorai.011G184800 Gossypium raimondii HOM05D002556 ORTHO05D003153 2.1e-21 106.7 193 43.0
Gohir.D10G165600 Gossypium hirsutum HOM05D002556 ORTHO05D003153 3.5e-21 105.9 193 43.0
Actinidia40218 Actinidia chinensis HOM05D002556 ORTHO05D003153 6.0e-21 105.1 191 35.1
Cfa015509 Carpinus fangiana HOM05D002556 ORTHO05D003153 6.0e-21 105.1 169 40.8
Duzib151G1179 Durio zibethinus HOM05D002556 ORTHO05D003153 7.9e-21 104.8 172 42.4
Gohir.D02G051500 Gossypium hirsutum HOM05D002556 ORTHO05D003153 3.0e-20 102.8 171 39.8
CSS0031733 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 5.1e-20 102.1 172 39.5
Haze_01041 Corylus avellana HOM05D002556 ORTHO05D003153 8.7e-20 101.3 169 39.6
Actinidia23440 Actinidia chinensis HOM05D002556 ORTHO05D003153 1.1e-19 100.9 192 39.6
Gorai.005G056800 Gossypium raimondii HOM05D002556 ORTHO05D003153 1.1e-19 100.9 171 39.2
TWI09G1603 Tripterygium wilfordii HOM05D002556 ORTHO05D003153 2.5e-19 99.8 188 39.4
Gohir.A02G045500 Gossypium hirsutum HOM05D002556 ORTHO05D003153 3.3e-19 99.4 171 39.2
Dinv32988 Davidia involucrata HOM05D002556 ORTHO05D003153 4.8e-18 95.5 191 37.7
PSO447G0225 Papaver somniferum HOM05D002556 ORTHO05D003153 6.9e-17 91.7 197 41.6
Gohir.A10G102045 Gossypium hirsutum HOM05D002556 ORTHO05D003153 9.0e-17 91.3 171 42.1
Ciclev10004184m.g Citrus clementina HOM05D002556 ORTHO05D003153 2.6e-16 89.7 104 47.1
PSO210G2558 Papaver somniferum HOM05D002556 ORTHO05D003153 2.6e-16 89.7 198 41.9
COL.COLO4_13950 Corchorus olitorius HOM05D002556 ORTHO05D003153 7.6e-16 88.2 191 33.5
CiPaw.02G087500 Carya illinoinensis HOM05D002556 ORTHO05D003153 4.9e-15 85.5 193 35.2
Cc03_g02500 Coffea canephora HOM05D002556 ORTHO05D003153 1.1e-14 84.3 169 40.2
Nitab4.5_0000303g0020 Nicotiana tabacum HOM05D002556 ORTHO05D003153 3.2e-14 82.8 177 33.9
Nitab4.5_0006501g0050 Nicotiana tabacum HOM05D002556 ORTHO05D003153 7.1e-14 81.6 177 33.3
QL06p006973 Quercus lobata HOM05D002556 ORTHO05D003153 7.1e-14 81.6 168 37.5
Rhsim04G0215200 Rhododendron simsii HOM05D002556 ORTHO05D003153 7.1e-14 81.6 193 35.2
Aqoxy5G00635 Aquilegia oxysepala HOM05D002556 ORTHO05D003153 2.1e-13 80.1 167 36.5
Nitab4.5_0001624g0020 Nicotiana tabacum HOM05D002556 ORTHO05D003153 2.1e-13 80.1 177 32.8
Sabra10G0010100 Salix brachista HOM05D002556 ORTHO05D003153 6.0e-13 78.6 167 38.3
MBI14_g12131_MAGBIO Magnolia biondii HOM05D002556 ORTHO05D003153 1.3e-12 77.4 198 34.3
MBI19_g32770_MAGBIO Magnolia biondii HOM05D002556 ORTHO05D003153 1.3e-12 77.4 197 35.0
Prupe.1G143500 Prunus persica HOM05D002556 ORTHO05D003153 1.3e-12 77.4 191 30.9
Rhsim02G0014300 Rhododendron simsii HOM05D002556 ORTHO05D003153 3.9e-12 75.9 176 31.2
Actinidia21081 Actinidia chinensis HOM05D002556 ORTHO05D003153 8.7e-12 74.7 175 32.0
Haze_04805 Corylus avellana HOM05D002556 ORTHO05D003153 8.7e-12 74.7 186 33.9
MSTRG.24773 Avicennia marina HOM05D002556 ORTHO05D003153 1.5e-11 73.9 98 42.9
Peaxi162Scf01067g00025 Petunia axillaris HOM05D002556 ORTHO05D003153 2.5e-11 73.2 173 31.2
vmacro08216 Vaccinium macrocarpon HOM05D002556 ORTHO05D003153 2.5e-11 73.2 191 33.0
FAN22G1976 Fragaria x ananassa HOM05D002556 ORTHO05D003153 7.4e-11 71.6 194 34.5
FAN17G1599 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.3e-10 70.9 194 33.5
Oeu022243.3 Olea europaea HOM05D002556 ORTHO05D003153 1.6e-10 70.5 130 37.7
PGSC0003DMG400022845 Solanum tuberosum HOM05D002556 ORTHO05D003153 1.6e-10 70.5 173 30.6
Manes.03G190200 Manihot esculenta HOM05D002556 ORTHO05D003153 2.8e-10 69.7 191 38.2
FvH4_4g17010 Fragaria vesca HOM05D002556 ORTHO05D003153 3.7e-10 69.3 194 34.0
FAN12G2677 Fragaria x ananassa HOM05D002556 ORTHO05D003153 3.7e-10 69.3 194 34.0
Solyc01g067790.3 Solanum lycopersicum HOM05D002556 ORTHO05D003153 3.7e-10 69.3 173 30.6
FAN07G2116 Fragaria x ananassa HOM05D002556 ORTHO05D003153 4.8e-10 68.9 194 33.5
Potri.010G014700 Populus trichocarpa HOM05D002556 ORTHO05D003153 4.8e-10 68.9 207 32.9
CSS0029361 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 8.2e-10 68.2 191 31.9
CSS0044142 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 8.2e-10 68.2 191 31.9
QL07p015831 Quercus lobata HOM05D002556 ORTHO05D003153 1.1e-09 67.8 186 31.7
FAN12G0875 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.4e-09 67.4 194 34.0
SalBow5G3083 Salvia bowleyana HOM05D002556 ORTHO05D003153 1.8e-09 67.0 98 41.8
SalBow5G3428 Salvia bowleyana HOM05D002556 ORTHO05D003153 1.8e-09 67.0 98 41.8
Sopen01g029750 Solanum pennellii HOM05D002556 ORTHO05D003153 1.8e-09 67.0 172 30.8
Eucgr.B01260 Eucalyptus grandis HOM05D002556 ORTHO05D003153 4.0e-09 65.9 113 37.2
Lj6C667G18 Lonicera japonica HOM05D002556 ORTHO05D003153 5.3e-09 65.5 167 34.1
MELO3C021370.2 Cucumis melo HOM05D002556 ORTHO05D003153 9.0e-09 64.7 167 32.3
Eucgr.L01602 Eucalyptus grandis HOM05D002556 ORTHO05D003153 9.0e-09 64.7 113 37.2
CAN.G185.4 Capsicum annuum HOM05D002556 ORTHO05D003153 3.4e-08 62.8 175 30.3
MD16G1176700 Malus domestica HOM05D002556 ORTHO05D003153 3.4e-08 62.8 194 28.9
MD13G1175000 Malus domestica HOM05D002556 ORTHO05D003153 5.8e-08 62.0 196 30.1
vmacro15271 Vaccinium macrocarpon HOM05D002556 ORTHO05D003153 5.8e-08 62.0 59 49.2
GSVIVG01017825001 Vitis vinifera HOM05D002556 ORTHO05D003153 5.8e-08 62.0 138 34.1
RcHm_v2.0_Chr4g0420701 Rosa chinensis HOM05D002556 ORTHO05D003153 7.6e-08 61.6 197 32.0
Atru.chr4.2739 Acer truncatum HOM05D002556 ORTHO05D003153 1.0e-07 61.2 90 41.1
Hma1.2p1_0078F.1_g040880 Hydrangea macrophylla HOM05D002556 ORTHO05D003153 1.7e-07 60.5 191 33.5
ClCG06G005460 Citrullus lanatus HOM05D002556 ORTHO05D003153 8.4e-07 58.2 61 49.2
CsaV3_6G005660 Cucumis sativus L. HOM05D002556 ORTHO05D003153 8.4e-07 58.2 168 32.7
Manes.15G018000 Manihot esculenta HOM05D002556 ORTHO05D003153 8.4e-07 58.2 149 34.9
Sed0002753 Sechium edule HOM05D002556 ORTHO05D003153 2.5e-06 56.6 168 30.4


User provided reference genes

Program Settings