Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.0e-110 403.3 191 100.0
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 5.7e-48 194.9 112 81.2
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 8.5e-44 181.0 112 74.1
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 1.1e-43 180.6 112 72.3
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 5.5e-43 178.3 112 72.3
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 9.3e-43 177.6 112 73.2
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 9.3e-43 177.6 112 73.2
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 9.3e-43 177.6 116 69.8
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 9.3e-43 177.6 113 73.5
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 2.1e-42 176.4 115 71.3
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 4.6e-42 175.3 113 72.6
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 4.6e-42 175.3 113 72.6
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 6.1e-42 174.9 113 71.7
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 3.9e-41 172.2 111 71.2
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 6.7e-41 171.4 115 71.3
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 2.5e-40 169.5 114 71.1
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 7.4e-40 167.9 117 71.8
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 7.4e-40 167.9 117 71.8
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 9.7e-40 167.5 109 71.6
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 2.2e-39 166.4 103 73.8
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 2.2e-39 166.4 109 69.7
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 2.2e-39 166.4 119 69.7
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 2.8e-39 166.0 112 66.1
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 3.7e-39 165.6 115 70.4
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 8.2e-39 164.5 108 72.2
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 8.2e-39 164.5 108 72.2
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 1.1e-38 164.1 113 67.3
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 1.8e-38 163.3 108 71.3
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 6.9e-38 161.4 109 67.9
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 9.1e-38 161.0 110 69.1
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 1.2e-37 160.6 112 68.8
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 1.5e-37 160.2 112 67.9
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 1.5e-37 160.2 112 67.9
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 2.0e-37 159.8 107 68.2
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 2.6e-37 159.5 109 68.8
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 2.6e-37 159.5 108 70.4
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 2.6e-37 159.5 109 67.9
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 7.7e-37 157.9 107 67.3
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 7.7e-37 157.9 112 65.2
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 7.7e-37 157.9 112 65.2
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 1.3e-36 157.1 109 67.0
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 2.2e-36 156.4 109 67.0
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 3.8e-36 155.6 109 67.0
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 3.8e-36 155.6 112 65.2
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 5.0e-36 155.2 112 65.2
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 1.1e-35 154.1 113 60.2
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 2.5e-35 152.9 112 64.3
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 2.5e-35 152.9 112 65.2
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 9.4e-35 151.0 112 63.4
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 3.6e-34 149.1 115 61.7
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 3.6e-34 149.1 110 60.9
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 6.1e-34 148.3 109 65.1
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 6.1e-34 148.3 103 64.1
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 7.9e-34 147.9 113 61.9
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 7.9e-34 147.9 99 68.7
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 1.4e-33 147.1 113 60.2
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 1.4e-33 147.1 108 63.0
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 3.9e-33 145.6 99 67.7
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 5.1e-33 145.2 105 63.8
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 6.7e-33 144.8 99 66.7
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 6.7e-33 144.8 119 58.0
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 8.8e-33 144.4 112 63.4
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 8.8e-33 144.4 110 60.9
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 1.1e-32 144.1 113 59.3
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 2.6e-32 142.9 110 60.0
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 3.3e-32 142.5 103 66.0
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 4.4e-32 142.1 122 56.6
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 1.4e-30 137.1 109 61.5
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 1.8e-30 136.7 95 66.3
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 3.1e-30 136.0 98 67.3
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 6.9e-30 134.8 103 58.3
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 1.4e-27 127.1 112 56.2
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 2.5e-27 126.3 120 51.7
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 1.4e-25 120.6 94 62.8
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 1.3e-23 114.0 103 58.3
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 1.7e-23 113.6 78 71.8
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 9.1e-22 107.8 103 46.6
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 1.2e-21 107.5 85 64.7
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 1.7e-20 103.6 89 58.4
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 2.9e-20 102.8 72 68.1
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 6.5e-20 101.7 117 47.0
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 8.5e-20 101.3 117 47.9
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 8.5e-20 101.3 117 47.0
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 8.5e-20 101.3 117 47.0
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 1.1e-19 100.9 104 53.8
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 1.5e-19 100.5 90 52.2
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 1.5e-19 100.5 87 55.2
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 1.5e-19 100.5 117 46.2
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 1.5e-19 100.5 117 46.2
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 1.9e-19 100.1 87 55.2
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 2.5e-19 99.8 117 46.2
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 3.2e-19 99.4 107 49.5
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 3.2e-19 99.4 107 49.5
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 2.7e-18 96.3 104 50.0
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.7e-18 96.3 91 52.7
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 3.0e-17 92.8 70 70.0
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.5e-11 73.2 76 46.1
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 1.6e-10 70.5 90 41.1


User provided reference genes

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