Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 2.7e-192 675.2 355 100.0
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 1.2e-112 410.6 343 60.6
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 1.0e-111 407.5 358 61.5
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 4.2e-105 385.6 343 61.2
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 7.2e-105 384.8 361 57.6
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 2.7e-104 382.9 327 61.2
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 3.6e-104 382.5 356 55.9
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 2.3e-103 379.8 318 60.1
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 2.2e-101 373.2 357 56.9
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 4.8e-101 372.1 345 59.1
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 1.1e-100 370.9 335 58.2
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 1.8e-100 370.2 341 55.7
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 2.0e-99 366.7 336 57.4
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 3.8e-98 362.5 369 54.7
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 1.1e-97 360.9 341 59.2
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 1.9e-97 360.1 369 54.5
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 7.2e-97 358.2 335 57.0
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 4.7e-96 355.5 325 57.8
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 7.9e-96 354.8 346 54.0
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.8e-95 353.6 355 54.9
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 5.1e-95 352.1 342 55.3
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 2.0e-94 350.1 364 53.6
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 2.6e-94 349.7 362 52.8
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.3e-93 347.4 352 53.7
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 2.8e-93 346.3 351 53.8
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 2.8e-93 346.3 361 52.6
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 3.7e-93 345.9 348 56.0
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 2.4e-92 343.2 356 53.1
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.0e-92 341.7 366 52.5
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.0e-92 341.7 366 52.5
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.0e-92 341.7 366 52.5
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 9.1e-92 341.3 344 54.7
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 9.1e-92 341.3 341 54.5
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 1.5e-91 340.5 341 54.5
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 2.0e-91 340.1 364 51.6
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 1.0e-90 337.8 336 54.2
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 1.7e-90 337.0 341 56.0
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 1.9e-89 333.6 320 55.0
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 2.5e-89 333.2 371 51.5
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 5.5e-89 332.0 341 56.0
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 1.2e-88 330.9 357 51.5
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 2.1e-88 330.1 360 50.6
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 3.6e-88 329.3 357 51.3
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 1.4e-87 327.4 360 51.9
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 1.8e-87 327.0 342 54.4
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 1.1e-86 324.3 337 50.1
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 2.0e-86 323.6 353 51.3
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 3.3e-86 322.8 355 51.0
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 3.7e-85 319.3 338 55.0
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 1.4e-84 317.4 339 50.4
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 1.8e-84 317.0 336 50.6
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 1.8e-84 317.0 334 50.0
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 3.1e-84 316.2 353 49.3
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 7.0e-84 315.1 351 51.0
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 1.2e-83 314.3 341 51.0
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 1.2e-83 314.3 373 50.9
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 2.6e-83 313.2 340 50.0
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 1.7e-82 310.5 309 51.5
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 2.9e-82 309.7 339 51.6
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 1.5e-81 307.4 313 50.5
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 4.2e-81 305.8 362 48.1
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 9.4e-81 304.7 341 50.4
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 2.7e-80 303.1 325 54.2
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 2.3e-79 300.1 343 48.4
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 3.0e-79 299.7 368 47.3
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 8.8e-79 298.1 332 47.3
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 8.8e-79 298.1 340 47.1
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 2.0e-78 297.0 320 50.6
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 9.7e-78 294.7 364 46.2
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 2.8e-77 293.1 365 48.2
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 3.1e-76 289.7 364 45.1
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 7.7e-75 285.0 344 46.8
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 8.5e-74 281.6 350 47.1
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 8.0e-72 275.0 329 48.0
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 7.5e-70 268.5 347 44.7
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 7.5e-70 268.5 347 44.7
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 7.5e-70 268.5 347 44.7
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 9.8e-70 268.1 314 49.7
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 1.3e-69 267.7 345 43.5
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 5.4e-68 262.3 295 46.8
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 5.9e-67 258.8 343 47.5
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 5.9e-67 258.8 354 43.8
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 1.0e-66 258.1 307 47.6
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 2.3e-66 256.9 343 46.1
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 3.8e-66 256.1 265 54.0
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 3.3e-65 253.1 346 42.2
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 7.2e-65 251.9 328 46.3
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 4.7e-64 249.2 285 47.7
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 2.3e-63 246.9 331 43.5
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 2.3e-63 246.9 359 41.8
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 2.2e-61 240.4 332 44.9
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 1.2e-59 234.6 351 40.7
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 2.0e-59 233.8 351 45.6
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 2.7e-59 233.4 335 44.8
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 2.9e-58 229.9 335 44.8
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 5.0e-58 229.2 327 42.2
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 7.3e-57 225.3 199 53.3
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 1.6e-56 224.2 348 41.1
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 4.6e-51 206.1 326 41.7
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 6.0e-51 205.7 332 39.8
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 1.7e-50 204.1 278 42.1
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.7e-50 204.1 338 40.8
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 8.9e-47 191.8 338 36.4
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 9.8e-46 188.3 264 44.7
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 1.6e-43 181.0 316 36.7
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 1.7e-42 177.6 318 40.9
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 6.2e-40 169.1 364 33.8
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 3.2e-36 156.8 130 58.5
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 2.3e-34 150.6 109 64.2
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 2.1e-32 144.1 173 45.1
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 4.7e-32 142.9 288 33.3
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 8.9e-31 138.7 163 43.6
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 2.6e-30 137.1 154 45.5
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 8.4e-29 132.1 155 43.2
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 3.0e-26 123.6 263 31.6
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 5.6e-25 119.4 102 53.9
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 2.2e-21 107.5 88 54.5
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 5.1e-18 96.3 106 44.3
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 5.1e-18 96.3 106 44.3
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 8.1e-16 89.0 93 46.2
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 1.4e-15 88.2 113 42.5
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 1.8e-15 87.8 109 43.1
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 9.0e-15 85.5 109 43.1
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 9.0e-15 85.5 109 43.1
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 2.0e-14 84.3 108 41.7
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 2.0e-14 84.3 108 42.6
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 2.0e-14 84.3 108 41.7
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 2.6e-14 84.0 110 44.5
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 1.1e-12 78.6 61 60.7
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 9.3e-12 75.5 156 30.1
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 1.2e-11 75.1 178 31.5
Sabra08G0117800 Salix brachista HOM05D000633 ORTHO05D000477 3.5e-11 73.6 74 47.3
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 3.0e-10 70.5 98 37.8
BcaC07g42130 Brassica carinata HOM05D005574 ORTHO05D007102 6.9e-07 59.3 105 35.2
Haze_20405 Corylus avellana HOM05D005574 ORTHO05D007102 6.9e-07 59.3 55 50.9


User provided reference genes

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