Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR308G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000568 1.5e-43 179.1 87 100.0
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 4.3e-35 151.0 81 87.7
TAR709G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000568 3.2e-30 134.8 81 79.0
TAR055G0004 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.1e-20 100.9 67 68.7
TAR344G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 4.9e-15 84.3 79 54.4
Atru.chr11.301 Acer truncatum HOM05D000107 ORTHO05D000062 1.9e-14 82.4 94 46.8
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-13 77.0 91 44.0
Rhsim04G0033300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-13 77.0 91 44.0
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-12 76.6 91 44.0
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.0e-12 75.1 91 42.9
TAR190G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.1e-11 73.2 75 49.3
Atru.chr1.1830 Acer truncatum HOM05D000107 ORTHO05D000062 1.9e-11 72.4 78 51.3
Rhsim09G0134500 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-11 71.2 91 41.8
CSS0006285 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0013019 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0020176 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0020537 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0022844 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0033153 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0034159 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0035542 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0036792 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0038506 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
CSS0043987 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.6e-11 70.9 78 46.2
Rhsim11G0004400 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.6e-11 70.9 88 44.3
HanXRQChr03g0071531 Helianthus annuus HOM05D000107 ORTHO05D000062 9.6e-11 70.1 69 49.3
HanXRQChr05g0140971 Helianthus annuus HOM05D000107 ORTHO05D000062 2.1e-10 68.9 64 51.6
HanXRQChr05g0141801 Helianthus annuus HOM05D000107 ORTHO05D000062 2.1e-10 68.9 64 51.6
HanXRQChr04g0099071 Helianthus annuus HOM05D000107 ORTHO05D000062 8.1e-10 67.0 69 47.8
HanXRQChr05g0149051 Helianthus annuus HOM05D000107 ORTHO05D000062 8.1e-10 67.0 69 47.8
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 1.1e-09 66.6 85 44.7
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-09 66.6 66 48.5
Atru.chr4.799 Acer truncatum HOM05D000107 ORTHO05D000062 1.8e-09 65.9 73 42.5
EL10Ac9g22618 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-09 65.9 85 41.2
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.8e-09 65.9 73 42.5
Rhsim11G0013600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-09 65.9 68 45.6
arahy.Tifrunner.gnm1.ann1.EFR0N4 Arachis hypogaea HOM05D000107 ORTHO05D000062 2.4e-09 65.5 73 47.9
ECA234G1212 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.4e-09 65.5 69 44.9
Hund01184 Selenicereus undatus HOM05D000107 ORTHO05D006908 2.4e-09 65.5 84 41.7
ECA236G2248 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.1e-09 65.1 69 44.9
Prupe.1G266000 Prunus persica HOM05D000107 ORTHO05D000062 3.1e-09 65.1 73 46.6
PGSC0003DMG401013972 Solanum tuberosum HOM05D000107 ORTHO05D000062 3.1e-09 65.1 62 50.0
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.0e-09 64.7 66 47.0
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.0e-09 64.7 66 47.0
Atru.chr11.780 Acer truncatum HOM05D000107 ORTHO05D000062 9.0e-09 63.5 69 43.5
ECA096G0002 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.0e-09 63.5 69 44.9
ECA164G0001 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.0e-09 63.5 69 44.9
ECA233G5567 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.0e-09 63.5 69 44.9
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.0e-09 63.5 83 38.6
Sopen04g011400 Solanum pennellii HOM05D000107 ORTHO05D000062 9.0e-09 63.5 73 43.8
Atru.chr1.1625 Acer truncatum HOM05D000107 ORTHO05D000062 1.2e-08 63.2 69 43.5
Atru.chr2.1683 Acer truncatum HOM05D000107 ORTHO05D000062 1.5e-08 62.8 70 41.4
EL10Ac6g14682 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-08 62.8 85 42.4
EL10Ac9g22639 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-08 62.8 82 37.8
ECA246G3624 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-08 62.8 69 44.9
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 1.5e-08 62.8 68 44.1
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 2.0e-08 62.4 71 40.8
Migut.D01462 Erythranthe guttata HOM05D000107 ORTHO05D000062 2.0e-08 62.4 84 39.3
Rhsim11G0067600 Rhododendron simsii HOM05D000107 ORTHO05D000568 2.0e-08 62.4 83 37.3
Lj8C456G3 Lonicera japonica HOM05D000107 ORTHO05D000062 2.6e-08 62.0 66 45.5
Ah.08g223240 Amaranthus hybridus HOM05D000107 ORTHO05D000062 3.4e-08 61.6 96 36.5
CANSAT78G1492 Cannabis sativa HOM05D000107 ORTHO05D000062 3.4e-08 61.6 71 40.8
ECA227G0003 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.4e-08 61.6 69 43.5
PGSC0003DMG400019085 Solanum tuberosum HOM05D000107 ORTHO05D000062 3.4e-08 61.6 84 41.7
EL10Ac3g07059 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-08 61.2 38 65.8
CANSAT64G1673 Cannabis sativa HOM05D000107 ORTHO05D000062 4.4e-08 61.2 63 47.6
CANSAT64G2733 Cannabis sativa HOM05D000107 ORTHO05D000062 4.4e-08 61.2 63 47.6
Rhsim02G0161000 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.8e-08 60.8 39 64.1
Sopen12g014820 Solanum pennellii HOM05D000107 ORTHO05D000062 5.8e-08 60.8 71 42.3
TAR516G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.8e-08 60.8 75 40.0
CSS0009480 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.6e-08 60.5 75 37.3
AUR62028450 Chenopodium quinoa HOM05D003339 ORTHO05D003847 7.6e-08 60.5 86 36.0
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 7.6e-08 60.5 73 42.5
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 7.6e-08 60.5 73 42.5
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 9.9e-08 60.1 64 45.3
Atru.chr3.2737 Acer truncatum HOM05D000107 ORTHO05D000062 9.9e-08 60.1 64 45.3
EL10Ac1g01791 Beta vulgaris HOM05D000107 ORTHO05D000062 9.9e-08 60.1 73 43.8
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 9.9e-08 60.1 73 42.5
TPR.G36035 Trifolium pratense HOM05D000107 ORTHO05D000062 9.9e-08 60.1 44 56.8
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 1.3e-07 59.7 71 43.7
Rhsim01G0079500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 59.7 67 43.3
Rhsim13G0141700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 59.7 66 43.9
Sopen12g025990 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-07 59.7 73 42.5
Atru.chr2.1893 Acer truncatum HOM05D000107 ORTHO05D000062 1.7e-07 59.3 81 38.3
EL10Ac8g20153 Beta vulgaris HOM05D008595 ORTHO05D010945 1.7e-07 59.3 73 43.8
CSS0013241 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-07 59.3 75 38.7
Rhsim01G0081600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-07 59.3 74 43.2
Sopen09g019850 Solanum pennellii HOM05D000107 ORTHO05D000062 1.7e-07 59.3 73 41.1
TPR.G34585 Trifolium pratense HOM05D000107 ORTHO05D000062 1.7e-07 59.3 98 38.8
CSS0007461 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-07 58.9 75 37.3
CSS0007710 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-07 58.9 75 37.3
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-07 58.9 75 37.3
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-07 58.9 75 37.3
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-07 58.9 75 37.3
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-07 58.9 75 37.3
AUR62043404 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.2e-07 58.9 84 42.9
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.9e-07 58.5 75 37.3
RcHm_v2.0_Chr2g0127551 Rosa chinensis HOM05D000107 ORTHO05D000062 2.9e-07 58.5 80 43.8
RcHm_v2.0_Chr2g0143321 Rosa chinensis HOM05D000107 ORTHO05D000062 2.9e-07 58.5 80 43.8
Sopen05g023540 Solanum pennellii HOM05D000107 ORTHO05D000062 2.9e-07 58.5 71 40.8
Atru.chr11.622 Acer truncatum HOM05D000107 ORTHO05D000062 3.8e-07 58.2 64 42.2
CSS0007472 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.8e-07 58.2 75 37.3
Sopen01g006480 Solanum pennellii HOM05D000107 ORTHO05D000062 3.8e-07 58.2 71 40.8
Sopen06g007570 Solanum pennellii HOM05D000107 ORTHO05D000062 3.8e-07 58.2 71 40.8
Sopen06g015790 Solanum pennellii HOM05D000004 ORTHO05D000062 3.8e-07 58.2 73 42.5
Sopen09g019560 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-07 58.2 73 43.8
TWI79G0232 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.9e-07 57.8 83 37.3
TAR429G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000568 4.9e-07 57.8 58 55.2
Ah.14g079590 Amaranthus hybridus HOM05D000107 ORTHO05D000062 6.4e-07 57.4 77 39.0
Aqoxy3G01770 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 6.4e-07 57.4 83 39.8
EL10Ac4g08646 Beta vulgaris HOM05D000107 ORTHO05D000062 6.4e-07 57.4 38 60.5
Ca_24070_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 6.4e-07 57.4 38 60.5
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.4e-07 57.4 78 38.5
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 6.4e-07 57.4 72 41.7
TPR.G18679 Trifolium pratense HOM05D000107 ORTHO05D000062 6.4e-07 57.4 72 40.3
Atru.chr2.2656 Acer truncatum HOM05D000107 ORTHO05D000062 8.4e-07 57.0 64 43.8
AUR62041533 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.4e-07 57.0 80 40.0
QL05p061366 Quercus lobata HOM05D000107 ORTHO05D000062 8.4e-07 57.0 44 59.1
Rhsim04G0054900 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.4e-07 57.0 78 38.5
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 8.4e-07 57.0 62 46.8
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 8.4e-07 57.0 73 41.1
TPR.G32034 Trifolium pratense HOM05D000107 ORTHO05D000062 8.4e-07 57.0 71 42.3
Ah.01g011060 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.1e-06 56.6 38 55.3
Ah.04g158600 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.1e-06 56.6 38 55.3
Ah.13g065570 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.1e-06 56.6 38 55.3
AUR62019546 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-06 56.6 84 41.7
AUR62041594 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-06 56.6 83 39.8
ECA248G0231 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.1e-06 56.6 69 44.9
Rhsim06G0124900 Rhododendron simsii HOM05D000038 ORTHO05D000423 1.1e-06 56.6 67 43.3
Atru.chr11.112 Acer truncatum HOM05D000107 ORTHO05D000062 1.4e-06 56.2 87 41.4
Atru.chr6.556 Acer truncatum HOM05D000107 ORTHO05D000062 1.4e-06 56.2 84 44.0
Sopen08g011050 Solanum pennellii HOM05D000107 ORTHO05D000062 1.4e-06 56.2 73 41.1
AUR62042258 Chenopodium quinoa HOM05D000107 ORTHO05D000568 1.9e-06 55.8 39 56.4
Prupe.7G022900 Prunus persica HOM05D000107 ORTHO05D000062 1.9e-06 55.8 64 40.6
QL12p026353 Quercus lobata HOM05D000107 ORTHO05D000062 1.9e-06 55.8 66 42.4
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-06 55.8 72 43.1
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 1.9e-06 55.8 73 41.1
Sopen12g025550 Solanum pennellii HOM05D000107 ORTHO05D000062 1.9e-06 55.8 73 41.1
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 2.4e-06 55.5 39 56.4
AUR62022208 Chenopodium quinoa HOM05D009516 ORTHO05D010476 2.4e-06 55.5 88 35.2
Ca_13698_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.4e-06 55.5 73 39.7
RcHm_v2.0_Chr4g0414991 Rosa chinensis HOM05D000107 ORTHO05D003213 2.4e-06 55.5 87 39.1
TPR.G18281 Trifolium pratense HOM05D000107 ORTHO05D051464 2.4e-06 55.5 35 65.7
TPR.G7880 Trifolium pratense HOM05D000107 ORTHO05D000062 2.4e-06 55.5 65 43.1
EL10Ac5g11378 Beta vulgaris HOM05D000107 ORTHO05D000062 3.2e-06 55.1 69 44.9
Hma1.2p1_0956F.1_g241370 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 3.2e-06 55.1 40 55.0
Hma1.2p1_2133F.1_g314790 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 3.2e-06 55.1 48 50.0
SHI40506 Sapria himalayana HOM05D000648 ORTHO05D000568 3.2e-06 55.1 61 44.3
EL10Ac4g08808 Beta vulgaris HOM05D000107 ORTHO05D000062 4.2e-06 54.7 43 55.8
Rhsim11G0004800 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-06 54.7 52 48.1
SHI46707 Sapria himalayana HOM05D000648 ORTHO05D000568 4.2e-06 54.7 61 44.3
TAR165G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 4.2e-06 54.7 75 37.3
Ah.06g185380 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.4e-06 54.3 38 52.6
QL04p020321 Quercus lobata HOM05D000315 ORTHO05D000062 5.4e-06 54.3 65 41.5
Aqoxy6G01994 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 7.1e-06 53.9 81 42.0
EL10Ac6g14192 Beta vulgaris HOM05D000107 ORTHO05D000062 7.1e-06 53.9 69 42.0
EL10Ac8g19688 Beta vulgaris HOM05D000107 ORTHO05D003213 7.1e-06 53.9 69 42.0
EL10Ac8g19796 Beta vulgaris HOM05D000107 ORTHO05D000062 7.1e-06 53.9 69 42.0
CAN.G175.7 Capsicum annuum HOM05D000107 ORTHO05D000568 7.1e-06 53.9 88 34.1
AUR62021541 Chenopodium quinoa HOM05D009516 ORTHO05D010476 7.1e-06 53.9 88 34.1
PSO017G4380 Papaver somniferum HOM05D000107 ORTHO05D000062 7.1e-06 53.9 60 48.3
QL12p013571 Quercus lobata HOM05D000107 ORTHO05D000062 7.1e-06 53.9 79 41.8
AUR62031853 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.3e-06 53.5 84 36.9
Ca_02652_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 9.3e-06 53.5 65 40.0
Hma1.2p1_1039F.1_g250840 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 9.3e-06 53.5 38 55.3
Rhsim11G0143900 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.3e-06 53.5 83 39.8
TAR472G0005 Trochodendron aralioides HOM05D000107 ORTHO05D000062 9.3e-06 53.5 69 40.6


User provided reference genes

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