Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR302G0003 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.2e-94 349.0 180 100.0
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.1e-80 302.0 153 100.0
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.1e-80 302.0 153 100.0
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 5.0e-38 161.8 139 61.2
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.5e-38 161.0 168 57.7
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.8e-35 153.3 164 53.7
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.3e-35 152.9 164 53.7
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-34 150.6 112 67.9
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-31 140.6 143 55.2
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.7e-30 136.7 162 50.0
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.5e-29 131.7 138 54.3
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.8e-27 126.7 178 43.8
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.7e-26 121.7 161 47.8
TAR371G0362 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.4e-24 116.3 130 53.1
TAR371G0593 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.0e-23 113.2 127 51.2
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.9e-22 109.4 153 45.1
TAR371G1271 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.5e-21 106.3 95 58.9
TAR371G1202 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-18 97.4 145 46.2
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.0e-18 96.7 149 42.3
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 1.2e-15 87.4 238 31.5
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 3.0e-14 82.8 160 33.8
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 8.6e-14 81.3 162 37.7
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 1.1e-13 80.9 159 35.8
MBI15_g33468_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.8e-11 73.6 130 32.3
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 3.1e-11 72.8 168 35.1
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.5e-10 70.5 131 34.4
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 3.4e-10 69.3 167 31.1
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 3.4e-10 69.3 167 31.1
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 1.3e-09 67.4 144 34.0
MELO3C024088.2 Cucumis melo HOM05D007726 ORTHO05D008819 6.4e-09 65.1 130 33.1
TAR369G0473 Trochodendron aralioides HOM05D000007 ORTHO05D001644 1.1e-08 64.3 138 33.3
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 1.4e-08 63.9 107 39.3
CsaV3_7G024580 Cucumis sativus L. HOM05D007726 ORTHO05D008819 1.9e-08 63.5 130 30.8
TAR375G0750 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.4e-08 63.2 136 30.9
MD15G1404600 Malus domestica HOM05D007726 ORTHO05D008819 5.4e-08 62.0 134 29.1
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 5.4e-08 62.0 150 31.3
Actinidia38511 Actinidia chinensis HOM05D000007 ORTHO05D007252 7.0e-08 61.6 104 40.4
ClCG09G010150 Citrullus lanatus HOM05D007726 ORTHO05D008819 7.0e-08 61.6 130 30.0
Dinv21217 Davidia involucrata HOM05D000007 ORTHO05D007252 7.0e-08 61.6 143 32.2
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 7.0e-08 61.6 159 34.6
PGSC0003DMG400008507 Solanum tuberosum HOM05D000007 ORTHO05D007252 9.2e-08 61.2 125 35.2
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 9.2e-08 61.2 125 32.0
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.6e-07 60.5 116 31.9
Sed0014390 Sechium edule HOM05D007726 ORTHO05D008819 2.0e-07 60.1 130 28.5
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 2.7e-07 59.7 104 36.5
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.5e-07 59.3 122 27.9
Migut.J00822 Erythranthe guttata HOM05D000007 ORTHO05D007252 4.6e-07 58.9 151 32.5
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 4.6e-07 58.9 130 28.5
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 7.8e-07 58.2 174 30.5
Nitab4.5_0000157g0110 Nicotiana tabacum HOM05D000007 ORTHO05D007252 7.8e-07 58.2 103 35.0
Nitab4.5_0007469g0030 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.0e-06 57.8 76 43.4
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 1.3e-06 57.4 127 35.4
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 1.3e-06 57.4 151 32.5
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 1.7e-06 57.0 151 32.5
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 1.7e-06 57.0 131 29.0
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.9e-06 55.8 140 25.7
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 3.9e-06 55.8 157 29.9
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 3.9e-06 55.8 137 31.4
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 3.9e-06 55.8 127 30.7
Prupe.7G195400 Prunus persica HOM05D003981 ORTHO05D003666 3.9e-06 55.8 138 29.7
TAR302G0001 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.6e-06 55.1 49 53.1
MBI19_g00242_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 8.6e-06 54.7 70 45.7
PSO210G6118 Papaver somniferum HOM05D000007 ORTHO05D000017 8.6e-06 54.7 136 30.1
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 8.6e-06 54.7 169 25.4


User provided reference genes

Program Settings