Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR280G0007 Trochodendron aralioides HOM05D007801 ORTHO05D009763 5.1e-38 160.6 83 100.0
TAR376G1197 Trochodendron aralioides HOM05D007801 ORTHO05D009763 7.5e-21 103.6 84 70.2
TAR376G0126 Trochodendron aralioides HOM05D007801 ORTHO05D009763 1.3e-20 102.8 83 66.3
Rhsim10G0155500 Rhododendron simsii HOM05D007801 ORTHO05D009763 4.5e-18 94.4 84 59.5
Nn1g05241 Nelumbo nucifera HOM05D007801 ORTHO05D009763 5.9e-18 94.0 83 60.2
Rhsim10G0155300 Rhododendron simsii HOM05D007801 ORTHO05D009763 1.0e-17 93.2 84 59.5
Nn5g28972 Nelumbo nucifera HOM05D007801 ORTHO05D009763 1.3e-17 92.8 85 63.5
Dinv21964 Davidia involucrata HOM05D007801 ORTHO05D009763 1.9e-16 89.0 77 66.2
Rhsim10G0155200 Rhododendron simsii HOM05D007801 ORTHO05D009763 1.6e-15 85.9 83 59.0
COL.COLO4_11043 Corchorus olitorius HOM05D007801 ORTHO05D009763 2.1e-15 85.5 85 60.0
Prupe.6G177500 Prunus persica HOM05D007801 ORTHO05D009763 2.1e-15 85.5 88 60.2
Potri.007G086000 Populus trichocarpa HOM05D007801 ORTHO05D009763 8.0e-15 83.6 86 58.1
Duzib264G0602 Durio zibethinus HOM05D007801 ORTHO05D009763 1.8e-14 82.4 85 58.8
Thecc.01G109200 Theobroma cacao HOM05D007801 ORTHO05D009763 1.8e-14 82.4 85 56.5
Potri.005G081400 Populus trichocarpa HOM05D007801 ORTHO05D009763 6.8e-14 80.5 86 58.1
FAN19G1576 Fragaria x ananassa HOM05D007801 ORTHO05D009763 4.4e-13 77.8 85 56.5
FAN23G2938 Fragaria x ananassa HOM05D007801 ORTHO05D009763 7.5e-13 77.0 85 56.5
FAN28G2811 Fragaria x ananassa HOM05D007801 ORTHO05D009763 9.8e-13 76.6 85 55.3
Oeu010979.1 Olea europaea HOM05D007801 ORTHO05D009763 1.3e-12 76.3 88 54.5
Cc07_g15740 Coffea canephora HOM05D007801 ORTHO05D009763 2.2e-12 75.5 88 54.5
Manes.12G139700 Manihot esculenta HOM05D007801 ORTHO05D009763 3.7e-12 74.7 85 52.9
Solyc04g054340.1 Solanum lycopersicum HOM05D007801 ORTHO05D009763 3.7e-12 74.7 84 53.6
FAN26G2641 Fragaria x ananassa HOM05D007801 ORTHO05D009763 4.8e-12 74.3 85 54.1
Rhsim10G0155600 Rhododendron simsii HOM05D007801 ORTHO05D009763 1.1e-11 73.2 72 52.8
Sopen04g024140 Solanum pennellii HOM05D007801 ORTHO05D009763 1.1e-11 73.2 85 55.3
PGSC0003DMG400012798 Solanum tuberosum HOM05D007801 ORTHO05D009763 2.4e-11 72.0 84 54.8
QL06p033111 Quercus lobata HOM05D007801 ORTHO05D009763 3.1e-11 71.6 85 52.9
Sabra05G0066600 Salix brachista HOM05D007801 ORTHO05D009763 4.1e-11 71.2 86 50.0
Rhsim10G0155400 Rhododendron simsii HOM05D007801 ORTHO05D009763 7.0e-11 70.5 74 52.7
Gohir.D12G094400 Gossypium hirsutum HOM05D007801 ORTHO05D009763 9.1e-11 70.1 85 54.1
Gorai.008G102600 Gossypium raimondii HOM05D007801 ORTHO05D009763 9.1e-11 70.1 85 54.1
CiPaw.03G137300 Carya illinoinensis HOM05D007801 ORTHO05D009763 2.0e-10 68.9 86 55.8
SalBow3G2462 Salvia bowleyana HOM05D007801 ORTHO05D009763 2.0e-10 68.9 85 50.6
PGSC0003DMG400030102 Solanum tuberosum HOM05D007801 ORTHO05D009763 2.7e-10 68.6 83 51.8
Gohir.A12G076100 Gossypium hirsutum HOM05D007801 ORTHO05D009763 5.9e-10 67.4 85 51.8
Gohir.D03G044800 Gossypium hirsutum HOM05D007801 ORTHO05D009763 5.9e-10 67.4 83 48.2
Gorai.003G045900 Gossypium raimondii HOM05D007801 ORTHO05D009763 5.9e-10 67.4 83 48.2
Gorai.003G046000 Gossypium raimondii HOM05D007801 ORTHO05D009763 5.9e-10 67.4 88 48.9
MBI02_g34270_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 5.9e-10 67.4 76 47.4
Gohir.D03G044900 Gossypium hirsutum HOM05D007801 ORTHO05D009763 7.7e-10 67.0 88 48.9
Gohir.A02G133400 Gossypium hirsutum HOM05D007801 ORTHO05D009763 1.3e-09 66.2 83 45.8
Nitab4.5_0006788g0020 Nicotiana tabacum HOM05D007801 ORTHO05D009763 1.3e-09 66.2 84 48.8
Glyma.08G139800 Glycine max HOM05D007801 ORTHO05D009763 1.7e-09 65.9 86 47.7
Glyma.18G020600 Glycine max HOM05D007801 ORTHO05D009763 1.7e-09 65.9 85 45.9
Glyma.11G236500 Glycine max HOM05D007801 ORTHO05D009763 3.8e-09 64.7 87 44.8
Nitab4.5_0008777g0020 Nicotiana tabacum HOM05D007801 ORTHO05D009763 3.8e-09 64.7 90 46.7
Gohir.A02G133600 Gossypium hirsutum HOM05D007801 ORTHO05D009763 5.0e-09 64.3 89 47.2
Cpa.g.c48066 Carica papaya HOM05D007801 ORTHO05D009763 6.5e-09 63.9 83 48.2
CiPaw.04G094700 Carya illinoinensis HOM05D007801 ORTHO05D009763 8.5e-09 63.5 88 50.0
Nitab4.5_0000818g0010 Nicotiana tabacum HOM05D007801 ORTHO05D009763 8.5e-09 63.5 84 46.4
Peaxi162Scf00611g00068 Petunia axillaris HOM05D007801 ORTHO05D009763 8.5e-09 63.5 86 50.0
Glyma.05G182100 Glycine max HOM05D007801 ORTHO05D009763 1.1e-08 63.2 87 46.0
Nn5g29145 Nelumbo nucifera HOM05D027087 ORTHO05D009763 1.1e-08 63.2 64 54.7
Nitab4.5_0004756g0030 Nicotiana tabacum HOM05D007801 ORTHO05D009763 1.5e-08 62.8 88 50.0
Haze_25007 Corylus avellana HOM05D007801 ORTHO05D009763 3.2e-08 61.6 91 45.1
Nitab4.5_0000727g0010 Nicotiana tabacum HOM05D007801 ORTHO05D009763 3.2e-08 61.6 88 48.9
Peaxi162Scf00295g00003 Petunia axillaris HOM05D007801 ORTHO05D009763 3.2e-08 61.6 84 44.0
Manes.13G088201 Manihot esculenta HOM05D007801 ORTHO05D009763 4.2e-08 61.2 88 46.6
Medtr8g091590 Medicago truncatula HOM05D007801 ORTHO05D009763 4.2e-08 61.2 88 43.2
ClCG01G019080 Citrullus lanatus HOM05D023936 ORTHO05D009763 5.5e-08 60.8 86 47.7
CSS0019659 Camellia sinensis var. sinensis HOM05D007801 ORTHO05D009763 7.2e-08 60.5 104 43.3
CSS0041778 Camellia sinensis var. sinensis HOM05D007801 ORTHO05D009763 7.2e-08 60.5 104 43.3
Eucgr.I00345 Eucalyptus grandis HOM05D007801 ORTHO05D009763 1.2e-07 59.7 92 43.5
Eucgr.L03494 Eucalyptus grandis HOM05D007801 ORTHO05D009763 1.2e-07 59.7 92 43.5
Aa31LG3G17090 Aethionema arabicum HOM05D008955 ORTHO05D011140 3.6e-07 58.2 83 45.8
Cfa002725 Carpinus fangiana HOM05D007801 ORTHO05D009763 3.6e-07 58.2 93 45.2
Peaxi162Scf00204g00033 Petunia axillaris HOM05D007801 ORTHO05D009763 3.6e-07 58.2 87 48.3
TPR.G2202 Trifolium pratense HOM05D007801 ORTHO05D009763 3.6e-07 58.2 91 41.8
Migut.H02407 Erythranthe guttata HOM05D007801 ORTHO05D009763 4.7e-07 57.8 96 43.8
Sabra07G0071200 Salix brachista HOM05D007801 ORTHO05D009763 4.7e-07 57.8 74 54.1
TWI77G0824 Tripterygium wilfordii HOM05D007801 ORTHO05D009763 8.0e-07 57.0 85 43.5
CsaV3_6G045760 Cucumis sativus L. HOM05D023936 ORTHO05D009763 1.4e-06 56.2 91 47.3
Manes.13G088400 Manihot esculenta HOM05D007801 ORTHO05D009763 1.4e-06 56.2 83 42.2
Phvul.002G263100 Phaseolus vulgaris HOM05D007801 ORTHO05D009763 3.0e-06 55.1 85 43.5
Sed0002922 Sechium edule HOM05D023936 ORTHO05D009763 4.0e-06 54.7 83 45.8
MELO3C007786.2 Cucumis melo HOM05D023936 ORTHO05D009763 5.2e-06 54.3 91 44.0
DCAR_011482 Daucus carota HOM05D007801 ORTHO05D177128 6.8e-06 53.9 83 39.8
Sed0023930 Sechium edule HOM05D023936 ORTHO05D009763 6.8e-06 53.9 88 40.9
Lsat_1_v5_gn_1_68261 Lactuca sativa HOM05D063245 ORTHO05D048394 8.8e-06 53.5 83 38.6
Peaxi162Scf28863g00002 Petunia axillaris HOM05D007801 ORTHO05D009763 8.8e-06 53.5 78 41.0


User provided reference genes

Program Settings