Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR265G0001 Trochodendron aralioides HOM05D003672 ORTHO05D004121 1.4e-76 289.7 154 100.0
TAR629G1848 Trochodendron aralioides HOM05D003672 ORTHO05D004121 1.6e-45 186.4 141 72.3
TAR629G0952 Trochodendron aralioides HOM05D003672 ORTHO05D004121 2.2e-34 149.4 103 75.7
Nn4g23428 Nelumbo nucifera HOM05D003672 ORTHO05D004121 2.4e-28 129.4 142 54.9
Nn3g17451 Nelumbo nucifera HOM05D003672 ORTHO05D004121 3.3e-22 109.0 142 52.1
Dinv34068 Davidia involucrata HOM05D003672 ORTHO05D004121 2.8e-21 105.9 143 53.1
Manes.14G085800 Manihot esculenta HOM05D003672 ORTHO05D004121 1.4e-17 93.6 146 43.8
GSVIVG01012221001 Vitis vinifera HOM05D003672 ORTHO05D004121 4.2e-17 92.0 136 47.1
QL03p074101 Quercus lobata HOM05D003672 ORTHO05D004121 3.5e-16 89.0 141 42.6
Prupe.5G205200 Prunus persica HOM05D003672 ORTHO05D004121 2.8e-13 79.3 149 39.6
Dinv22781 Davidia involucrata HOM05D003672 ORTHO05D004121 3.6e-13 79.0 151 39.1
PSO017G3206 Papaver somniferum HOM05D003672 ORTHO05D004121 1.1e-12 77.4 148 41.9
PSO478G1233 Papaver somniferum HOM05D003672 ORTHO05D004121 1.1e-12 77.4 148 41.9
Ciclev10019089m.g Citrus clementina HOM05D003672 ORTHO05D004121 9.0e-12 74.3 135 39.3
Duzib205G1655 Durio zibethinus HOM05D003672 ORTHO05D004121 1.2e-11 73.9 145 38.6
CANSAT80G1081 Cannabis sativa HOM05D003672 ORTHO05D004121 2.0e-11 73.2 141 38.3
Atru.chr9.577 Acer truncatum HOM05D003672 ORTHO05D004121 3.4e-11 72.4 138 39.9
CiPaw.05G125000 Carya illinoinensis HOM05D003672 ORTHO05D004121 9.9e-11 70.9 140 41.4
COL.COLO4_06856 Corchorus olitorius HOM05D003672 ORTHO05D004121 9.9e-11 70.9 140 38.6
Haze_11907 Corylus avellana HOM05D003672 ORTHO05D004121 9.9e-11 70.9 134 44.0
CANSAT39G0004 Cannabis sativa HOM05D003672 ORTHO05D004121 1.3e-10 70.5 141 37.6
Sabra15G0083600 Salix brachista HOM05D003672 ORTHO05D004121 1.7e-10 70.1 151 38.4
Nitab4.5_0009401g0050 Nicotiana tabacum HOM05D003672 ORTHO05D004121 3.8e-10 68.9 149 36.9
Oeu044870.1 Olea europaea HOM05D003672 ORTHO05D004121 6.4e-10 68.2 137 39.4
Thecc.03G101900 Theobroma cacao HOM05D003672 ORTHO05D004121 6.4e-10 68.2 150 41.3
MELO3C017225.2 Cucumis melo HOM05D003672 ORTHO05D004121 8.4e-10 67.8 141 41.1
Lj1g0027425 Lotus japonicus HOM05D003672 ORTHO05D004121 8.4e-10 67.8 138 34.8
TWI81G0716 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 8.4e-10 67.8 140 39.3
Duzib084G0362 Durio zibethinus HOM05D003672 ORTHO05D004121 1.1e-09 67.4 138 38.4
RcHm_v2.0_Chr7g0183101 Rosa chinensis HOM05D003672 ORTHO05D004121 1.1e-09 67.4 135 40.0
Cpa.g.sc94.57 Carica papaya HOM05D003672 ORTHO05D004121 2.4e-09 66.2 143 33.6
Dinv17414 Davidia involucrata HOM05D003672 ORTHO05D004121 2.4e-09 66.2 154 33.8
FAN18G3332 Fragaria x ananassa HOM05D003672 ORTHO05D004121 2.4e-09 66.2 137 38.7
TPR.G12189 Trifolium pratense HOM05D003672 ORTHO05D004121 2.4e-09 66.2 130 31.5
Aa31LG11G2260 Aethionema arabicum HOM05D003672 ORTHO05D004121 5.5e-09 65.1 142 36.6
FvH4_5g13830 Fragaria vesca HOM05D003672 ORTHO05D004121 5.5e-09 65.1 137 38.0
Ca_14345_v3 Cicer arietinum L. HOM05D003672 ORTHO05D004121 7.1e-09 64.7 129 31.8
FAN08G3423 Fragaria x ananassa HOM05D003672 ORTHO05D004121 7.1e-09 64.7 135 37.8
Manes.06G084700 Manihot esculenta HOM05D003672 ORTHO05D004121 7.1e-09 64.7 151 33.8
Aqoxy1G00151 Aquilegia oxysepala HOM05D003672 ORTHO05D004121 9.3e-09 64.3 138 36.2
AT5G08010 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 9.3e-09 64.3 136 40.4
Hma1.2p1_0060F.1_g033090 Hydrangea macrophylla HOM05D003672 ORTHO05D004121 9.3e-09 64.3 136 36.8
Potri.015G057600 Populus trichocarpa HOM05D003672 ORTHO05D004121 1.2e-08 63.9 147 38.8
Oeu061164.2 Olea europaea HOM05D003672 ORTHO05D004121 2.1e-08 63.2 140 35.0
Nitab4.5_0001485g0140 Nicotiana tabacum HOM05D003672 ORTHO05D004121 2.7e-08 62.8 149 36.2
THA.LOC104819401 Tarenaya hassleriana HOM05D003672 ORTHO05D004121 2.7e-08 62.8 139 36.0
BcaC06g33181 Brassica carinata HOM05D003672 ORTHO05D004121 4.6e-08 62.0 144 34.0
A03p46740 Brassica napus HOM05D003672 ORTHO05D004121 4.6e-08 62.0 138 37.0
BraA03t13796Z Brassica rapa HOM05D003672 ORTHO05D004121 4.6e-08 62.0 138 36.2
FAN13G1740 Fragaria x ananassa HOM05D003672 ORTHO05D004121 4.6e-08 62.0 137 38.0
Actinidia35037 Actinidia chinensis HOM05D003672 ORTHO05D004121 7.9e-08 61.2 134 38.8
MBI16_g38067_MAGBIO Magnolia biondii HOM05D003672 ORTHO05D004121 7.9e-08 61.2 138 40.6
BolC7t45002H Brassica oleracea HOM05D003672 ORTHO05D004121 1.8e-07 60.1 136 34.6
ClCG06G015630 Citrullus lanatus HOM05D003672 ORTHO05D004121 2.3e-07 59.7 139 42.4
Os12g0576300 Oryza sativa ssp. japonica HOM05D003672 ORTHO05D004121 2.3e-07 59.7 136 36.8
CsaV3_1G002930 Cucumis sativus L. HOM05D003672 ORTHO05D004121 3.0e-07 59.3 136 39.0
QL10p019524 Quercus lobata HOM05D003672 ORTHO05D004121 3.0e-07 59.3 144 35.4
AL6G18360 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 3.9e-07 58.9 136 36.8
AT5G61040 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 5.1e-07 58.5 136 34.6
arahy.Tifrunner.gnm1.ann1.R6LVKU Arachis hypogaea HOM05D003672 ORTHO05D004121 5.1e-07 58.5 138 31.2
MSTRG.22965 Avicennia marina HOM05D003672 ORTHO05D004121 5.1e-07 58.5 135 34.8
Carub.0008s2173 Capsella rubella HOM05D003672 ORTHO05D004121 6.7e-07 58.2 139 34.5
Psat2g037720 Pisum sativum HOM05D003672 ORTHO05D004121 6.7e-07 58.2 129 30.2
HPP92_007830 Vanilla planifolia HOM05D003672 ORTHO05D004121 8.7e-07 57.8 135 35.6
MD00G1005400 Malus domestica HOM05D003672 ORTHO05D004121 1.1e-06 57.4 49 59.2
Lj5C102T25 Lonicera japonica HOM05D003672 ORTHO05D004121 1.5e-06 57.0 136 34.6
CiPaw.11G053900 Carya illinoinensis HOM05D003672 ORTHO05D004121 1.9e-06 56.6 145 34.5
arahy.Tifrunner.gnm1.ann1.03S8MC Arachis hypogaea HOM05D003672 ORTHO05D004121 2.5e-06 56.2 138 30.4
Peaxi162Scf00201g00329 Petunia axillaris HOM05D003672 ORTHO05D004121 2.5e-06 56.2 148 32.4
Zm00001eb136280 Zea mays HOM05D003672 ORTHO05D004121 4.3e-06 55.5 140 35.7
Actinidia31938 Actinidia chinensis HOM05D003672 ORTHO05D004121 5.6e-06 55.1 76 43.4
TWI60G1197 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 5.6e-06 55.1 140 33.6
C07p44780 Brassica napus HOM05D003672 ORTHO05D004121 7.4e-06 54.7 136 32.4
Aa31LG3G18520 Aethionema arabicum HOM05D003672 ORTHO05D004121 9.6e-06 54.3 137 33.6
AL8G37700 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 9.6e-06 54.3 138 33.3
arahy.Tifrunner.gnm1.ann1.N0JE3Z Arachis hypogaea HOM05D003672 ORTHO05D004121 9.6e-06 54.3 140 33.6
Thhalv10013089m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 9.6e-06 54.3 140 39.3
Medtr3g025870 Medicago truncatula HOM05D003672 ORTHO05D004121 9.6e-06 54.3 129 29.5
Sed0002350 Sechium edule HOM05D003672 ORTHO05D004121 9.6e-06 54.3 147 40.1


User provided reference genes

Program Settings