Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR254G0001 Trochodendron aralioides HOM05D002672 ORTHO05D002887 1.3e-55 219.5 114 100.0
TAR623G0799 Trochodendron aralioides HOM05D002672 ORTHO05D002887 5.0e-44 181.0 111 83.8
Nn2g15174 Nelumbo nucifera HOM05D002672 ORTHO05D002887 2.6e-40 168.7 111 77.5
GSVIVG01033390001 Vitis vinifera HOM05D002672 ORTHO05D002887 2.2e-39 165.6 111 76.6
Actinidia22088 Actinidia chinensis HOM05D002672 ORTHO05D002887 3.7e-39 164.9 111 77.5
Dinv37010 Davidia involucrata HOM05D002672 ORTHO05D002887 3.2e-38 161.8 111 75.7
Rhsim03G0001100 Rhododendron simsii HOM05D002672 ORTHO05D002887 7.8e-37 157.1 113 73.5
Actinidia30558 Actinidia chinensis HOM05D002672 ORTHO05D002887 3.9e-36 154.8 111 73.9
CDE10G0711 Ceratophyllum demersum HOM05D002672 ORTHO05D002887 3.9e-36 154.8 111 69.4
CDE10G0048 Ceratophyllum demersum HOM05D002672 ORTHO05D002887 6.6e-36 154.1 111 69.4
Ciclev10021354m.g Citrus clementina HOM05D002672 ORTHO05D002887 1.1e-35 153.3 111 70.3
MD14G1002200 Malus domestica HOM05D002672 ORTHO05D002887 1.9e-35 152.5 116 69.8
Sed0007674 Sechium edule HOM05D002672 ORTHO05D002887 4.3e-35 151.4 115 69.6
QL07p020095 Quercus lobata HOM05D002672 ORTHO05D002887 5.6e-35 151.0 139 59.0
TWI77G0420 Tripterygium wilfordii HOM05D002672 ORTHO05D002887 5.6e-35 151.0 121 67.8
Phvul.001G109900 Phaseolus vulgaris HOM05D002672 ORTHO05D002887 1.2e-34 149.8 119 65.5
VMungo1383G1105 Vigna mungo HOM05D002672 ORTHO05D002887 1.2e-34 149.8 119 65.5
CiPaw.09G001400 Carya illinoinensis HOM05D002672 ORTHO05D002887 1.6e-34 149.4 127 62.2
MELO3C008797.2 Cucumis melo HOM05D002672 ORTHO05D002887 2.8e-34 148.7 115 67.8
arahy.Tifrunner.gnm1.ann1.SA2BAT Arachis hypogaea HOM05D002672 ORTHO05D002887 3.6e-34 148.3 124 63.7
MSTRG.27677 Avicennia marina HOM05D002672 ORTHO05D002887 3.6e-34 148.3 111 70.3
Lalb_Chr14g0364451 Lupinus albus HOM05D002672 ORTHO05D002887 3.6e-34 148.3 124 64.5
Peaxi162Scf00003g04833 Petunia axillaris HOM05D002672 ORTHO05D002887 3.6e-34 148.3 113 71.7
TWI74G0403 Tripterygium wilfordii HOM05D002672 ORTHO05D002887 3.6e-34 148.3 120 66.7
Medtr7g085450 Medicago truncatula HOM05D002672 ORTHO05D002887 4.7e-34 147.9 119 64.7
CsaV3_4G013320 Cucumis sativus L. HOM05D002672 ORTHO05D002887 6.2e-34 147.5 115 67.0
ECA285G0009 Erigeron canadensis HOM05D002672 ORTHO05D002887 6.2e-34 147.5 111 68.5
HanXRQChr01g0024701 Helianthus annuus HOM05D002672 ORTHO05D002887 6.2e-34 147.5 111 68.5
Sc19g0006480 Simmondsia chinensis HOM05D002672 ORTHO05D002887 6.2e-34 147.5 111 68.5
arahy.Tifrunner.gnm1.ann1.53N7TD Arachis hypogaea HOM05D002672 ORTHO05D002887 1.1e-33 146.7 124 62.9
arahy.Tifrunner.gnm1.ann1.6BXT91 Arachis hypogaea HOM05D002672 ORTHO05D002887 1.1e-33 146.7 124 62.9
ClCG04G005270 Citrullus lanatus HOM05D002672 ORTHO05D002887 1.1e-33 146.7 115 67.0
TPR.G5877 Trifolium pratense HOM05D002672 ORTHO05D002887 1.1e-33 146.7 121 63.6
Atru.chr2.1366 Acer truncatum HOM05D002672 ORTHO05D002887 1.4e-33 146.4 115 69.6
Nitab4.5_0007223g0020 Nicotiana tabacum HOM05D002672 ORTHO05D002887 1.4e-33 146.4 113 69.9
Nitab4.5_0008228g0020 Nicotiana tabacum HOM05D002672 ORTHO05D002887 1.4e-33 146.4 113 69.9
Solyc10g078520.2 Solanum lycopersicum HOM05D002672 ORTHO05D002887 1.4e-33 146.4 113 69.9
Sopen10g029170 Solanum pennellii HOM05D002672 ORTHO05D002887 1.4e-33 146.4 113 69.9
PGSC0003DMG400008367 Solanum tuberosum HOM05D002672 ORTHO05D002887 1.4e-33 146.4 113 69.9
DCAR_016869 Daucus carota HOM05D002672 ORTHO05D002887 1.8e-33 146.0 111 69.4
Lj1g0022931 Lotus japonicus HOM05D002672 ORTHO05D002887 1.8e-33 146.0 121 64.5
Manes.08G150000 Manihot esculenta HOM05D002672 ORTHO05D002887 1.8e-33 146.0 117 67.5
PGR142G0008 Punica granatum HOM05D002672 ORTHO05D002887 1.8e-33 146.0 105 71.4
AUR62032684 Chenopodium quinoa HOM05D002672 ORTHO05D002887 2.3e-33 145.6 112 67.0
Lsat_1_v5_gn_1_59540 Lactuca sativa HOM05D002672 ORTHO05D002887 3.1e-33 145.2 111 67.6
Oeu003210.1 Olea europaea HOM05D002672 ORTHO05D002887 3.1e-33 145.2 118 67.8
Sabra13G0052300 Salix brachista HOM05D002672 ORTHO05D002887 3.1e-33 145.2 122 66.4
Aa31LG2G1980 Aethionema arabicum HOM05D002672 ORTHO05D002887 4.0e-33 144.8 117 65.0
Aqoxy1G00499 Aquilegia oxysepala HOM05D002672 ORTHO05D002887 4.0e-33 144.8 112 71.4
Lj1A1137T84 Lonicera japonica HOM05D002672 ORTHO05D002887 4.0e-33 144.8 111 69.4
Prupe.7G003300 Prunus persica HOM05D002672 ORTHO05D002887 4.0e-33 144.8 118 66.9
AUR62032064 Chenopodium quinoa HOM05D002672 ORTHO05D002887 5.2e-33 144.4 112 66.1
Oeu003208.1 Olea europaea HOM05D002672 ORTHO05D002887 5.2e-33 144.4 110 70.9
Oeu003209.1 Olea europaea HOM05D002672 ORTHO05D002887 5.2e-33 144.4 110 70.9
PSO063G3245 Papaver somniferum HOM05D002672 ORTHO05D002887 5.2e-33 144.4 112 70.5
Potri.019G033800 Populus trichocarpa HOM05D002672 ORTHO05D002887 6.8e-33 144.1 121 64.5
ATR0697G210 Amborella trichopoda HOM05D002672 ORTHO05D002887 8.9e-33 143.7 111 70.3
RcHm_v2.0_Chr3g0497201 Rosa chinensis HOM05D002672 ORTHO05D002887 8.9e-33 143.7 111 67.6
EL10Ac3g06813 Beta vulgaris HOM05D002672 ORTHO05D002887 1.2e-32 143.3 112 67.9
Carub.0002s0957 Capsella rubella HOM05D002672 ORTHO05D002887 1.2e-32 143.3 117 64.1
CARHR055500 Cardamine hirsuta HOM05D002672 ORTHO05D002887 1.2e-32 143.3 117 64.1
Cpa.g.sc51.101 Carica papaya HOM05D002672 ORTHO05D002887 1.2e-32 143.3 120 65.0
Psat3g089120 Pisum sativum HOM05D002672 ORTHO05D002887 1.2e-32 143.3 123 61.8
AL1G64630 Arabidopsis lyrata HOM05D002672 ORTHO05D002887 1.5e-32 142.9 118 63.6
AT1G54390 Arabidopsis thaliana HOM05D002672 ORTHO05D002887 1.5e-32 142.9 118 63.6
Migut.C00472 Erythranthe guttata HOM05D002672 ORTHO05D002887 1.5e-32 142.9 112 67.0
Migut.D01187 Erythranthe guttata HOM05D002672 ORTHO05D002887 1.5e-32 142.9 112 67.0
FvH4_1g28050 Fragaria vesca HOM05D002672 ORTHO05D002887 1.5e-32 142.9 111 67.6
Ca_08259_v3 Cicer arietinum L. HOM05D002672 ORTHO05D002887 2.0e-32 142.5 121 61.2
Thhalv10003462m.g Eutrema salsugineum HOM05D002672 ORTHO05D002887 2.6e-32 142.1 119 64.7
PSO339G0446 Papaver somniferum HOM05D002672 ORTHO05D002887 2.6e-32 142.1 112 68.8
Potri.013G058800 Populus trichocarpa HOM05D002672 ORTHO05D002887 2.6e-32 142.1 122 64.8
vmacro12572 Vaccinium macrocarpon HOM05D002672 ORTHO05D002887 2.6e-32 142.1 122 65.6
CAN.G960.51 Capsicum annuum HOM05D002672 ORTHO05D002887 3.4e-32 141.7 113 68.1
COL.COLO4_13611 Corchorus olitorius HOM05D002672 ORTHO05D002887 3.4e-32 141.7 115 66.1
DCAR_013691 Daucus carota HOM05D002672 ORTHO05D002887 3.4e-32 141.7 103 69.9
Aqoxy2G00200 Aquilegia oxysepala HOM05D002672 ORTHO05D002887 4.4e-32 141.4 112 68.8
Glyma.19G110500 Glycine max HOM05D002672 ORTHO05D002887 4.4e-32 141.4 119 63.0
Gohir.A11G258600 Gossypium hirsutum HOM05D002672 ORTHO05D002887 4.4e-32 141.4 115 65.2
Gohir.D11G268700 Gossypium hirsutum HOM05D002672 ORTHO05D002887 4.4e-32 141.4 115 65.2
Gorai.007G288500 Gossypium raimondii HOM05D002672 ORTHO05D002887 4.4e-32 141.4 115 65.2
FAN23G2462 Fragaria x ananassa HOM05D002672 ORTHO05D002887 5.8e-32 141.0 111 65.8
FAN26G1451 Fragaria x ananassa HOM05D002672 ORTHO05D002887 5.8e-32 141.0 111 65.8
A04p09620 Brassica napus HOM05D002672 ORTHO05D002887 7.6e-32 140.6 119 62.2
BraA04t16621Z Brassica rapa HOM05D002672 ORTHO05D002887 7.6e-32 140.6 119 62.2
Sp7g07100 Schrenkiella parvula HOM05D002672 ORTHO05D002887 7.6e-32 140.6 118 62.7
THA.LOC104823784 Tarenaya hassleriana HOM05D002672 ORTHO05D002887 9.9e-32 140.2 117 64.1
DCAR_009678 Daucus carota HOM05D002672 ORTHO05D002887 1.7e-31 139.4 113 67.3
Thecc.05G293600 Theobroma cacao HOM05D002672 ORTHO05D002887 1.7e-31 139.4 115 64.3
FvH4_7g02040 Fragaria vesca HOM05D002672 ORTHO05D002887 2.9e-31 138.7 111 65.8
FAN06G3050 Fragaria x ananassa HOM05D003775 ORTHO05D004314 2.9e-31 138.7 111 65.8
Eucgr.A02091 Eucalyptus grandis HOM05D002672 ORTHO05D002887 3.8e-31 138.3 120 60.0
Sabra19G0041700 Salix brachista HOM05D002672 ORTHO05D002887 4.9e-31 137.9 121 62.0
BcaB06g26927 Brassica carinata HOM05D002672 ORTHO05D002887 1.1e-30 136.7 119 63.9
CSS0007216 Camellia sinensis var. sinensis HOM05D002672 ORTHO05D002887 1.4e-30 136.3 149 55.0
Haze_11185 Corylus avellana HOM05D002672 ORTHO05D002887 1.4e-30 136.3 123 62.6
Duzib177G0497 Durio zibethinus HOM05D002672 ORTHO05D002887 2.4e-30 135.6 115 62.6
Haze_11190 Corylus avellana HOM05D002672 ORTHO05D002887 4.1e-30 134.8 123 62.6
HanXRQChr03g0090411 Helianthus annuus HOM05D002672 ORTHO05D002887 4.1e-30 134.8 112 63.4
BcaC02g09472 Brassica carinata HOM05D002672 ORTHO05D002887 7.1e-30 134.0 116 60.3
C04p43190 Brassica napus HOM05D002672 ORTHO05D002887 7.1e-30 134.0 116 60.3
BolC4t25896H Brassica oleracea HOM05D002672 ORTHO05D002887 7.1e-30 134.0 116 60.3
CiPaw.10G000600 Carya illinoinensis HOM05D002672 ORTHO05D002887 7.1e-30 134.0 125 60.0
PGR042G0488 Punica granatum HOM05D002672 ORTHO05D002887 2.7e-29 132.1 120 60.0
Mapoly0099s0054 Marchantia polymorpha HOM05D002672 ORTHO05D002887 4.6e-29 131.3 103 66.0
Os03g0748200 Oryza sativa ssp. japonica HOM05D002672 ORTHO05D002887 4.6e-29 131.3 111 60.4
Duzib106G0634 Durio zibethinus HOM05D002672 ORTHO05D002887 6.0e-29 131.0 115 60.0
SEGI_38200 Sequoiadendron giganteum HOM05D002672 ORTHO05D002887 6.0e-29 131.0 112 61.6
Cc00_g05140 Coffea canephora HOM05D002672 ORTHO05D002887 1.0e-28 130.2 112 62.5
HPP92_009426 Vanilla planifolia HOM05D002672 ORTHO05D002887 1.7e-28 129.4 111 61.3
CANSAT78G2220 Cannabis sativa HOM05D002672 ORTHO05D002887 1.5e-27 126.3 143 52.4
SEGI_33253 Sequoiadendron giganteum HOM05D002672 ORTHO05D002887 1.5e-27 126.3 103 63.1
AagrBONN_evm.TU.Sc2ySwM_362.1458 Anthoceros agrestis HOM05D002672 ORTHO05D002887 9.6e-27 123.6 111 62.2
Zm00001eb057160 Zea mays HOM05D002672 ORTHO05D002887 1.4e-25 119.8 111 56.8
SGA_v2.0_scaffold59G20726 Striga asiatica HOM05D002672 ORTHO05D002887 2.4e-25 119.0 95 67.4
SMO116G0117 Selaginella moellendorffii HOM05D002672 ORTHO05D002887 4.4e-24 114.8 111 58.6
Pp3c17_17740 Physcomitrium patens HOM05D002672 ORTHO05D002887 1.0e-20 103.6 109 54.1
CBR_g34558 Chara braunii HOM05D002672 ORTHO05D002887 1.4e-17 93.2 96 55.2
FAN03G1589 Fragaria x ananassa HOM05D002672 ORTHO05D002887 1.6e-13 79.7 71 60.6
SHI00537 Sapria himalayana HOM05D002672 ORTHO05D002887 1.0e-12 77.0 74 58.1
Haze_19412 Corylus avellana HOM05D003349 ORTHO05D003898 1.1e-09 67.0 38 84.2
FAN10G0774 Fragaria x ananassa HOM05D002672 ORTHO05D002887 1.9e-06 56.2 51 60.8


User provided reference genes

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