Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR238G0001 Trochodendron aralioides HOM05D001334 ORTHO05D001119 8.2e-77 290.4 158 100.0
Dinv24115 Davidia involucrata HOM05D001334 ORTHO05D001119 4.1e-36 155.2 158 60.8
Dinv18099 Davidia involucrata HOM05D001334 ORTHO05D001119 4.7e-32 141.7 158 57.0
TAR623G0621 Trochodendron aralioides HOM05D001334 ORTHO05D001119 4.7e-32 141.7 157 61.8
Nn7g36190 Nelumbo nucifera HOM05D001334 ORTHO05D001119 2.3e-31 139.4 157 57.3
Nn2g15390 Nelumbo nucifera HOM05D001334 ORTHO05D001119 3.0e-31 139.0 157 57.3
MBI04_g13613_MAGBIO Magnolia biondii HOM05D001334 ORTHO05D001119 5.7e-30 134.8 158 57.6
Atru.chr1.988 Acer truncatum HOM05D001334 ORTHO05D001119 1.3e-29 133.7 157 56.1
PSO339G2873 Papaver somniferum HOM05D001334 ORTHO05D001119 8.3e-29 131.0 157 56.7
PSO384G3560 Papaver somniferum HOM05D001334 ORTHO05D001119 4.1e-28 128.6 157 56.1
Atru.chr1.959 Acer truncatum HOM05D001334 ORTHO05D001119 2.0e-27 126.3 157 54.8
Actinidia20292 Actinidia chinensis HOM05D001334 ORTHO05D001119 2.0e-27 126.3 158 54.4
TAR633G0230 Trochodendron aralioides HOM05D001334 ORTHO05D001119 2.3e-26 122.9 157 57.3
Potri.006G056800 Populus trichocarpa HOM05D001334 ORTHO05D001119 3.0e-26 122.5 156 52.6
Actinidia09368 Actinidia chinensis HOM05D001334 ORTHO05D001119 1.9e-25 119.8 158 51.9
Hma1.2p1_0856F.1_g229155 Hydrangea macrophylla HOM05D001334 ORTHO05D001119 1.2e-24 117.1 158 50.6
Cfa016876 Carpinus fangiana HOM05D001334 ORTHO05D001119 8.0e-24 114.4 159 52.8
GSVIVG01033345001 Vitis vinifera HOM05D001334 ORTHO05D001119 8.0e-24 114.4 144 56.2
Sabra06G0040100 Salix brachista HOM05D001334 ORTHO05D001119 1.0e-23 114.0 156 49.4
Aqoxy1G00275 Aquilegia oxysepala HOM05D001334 ORTHO05D001119 1.4e-23 113.6 162 46.9
Potri.016G051500 Populus trichocarpa HOM05D001334 ORTHO05D001119 3.1e-23 112.5 157 50.3
Lju124A34T50 Lonicera japonica HOM05D001334 ORTHO05D001119 4.0e-23 112.1 154 49.4
MBI01_g05763_MAGBIO Magnolia biondii HOM05D001334 ORTHO05D001119 8.9e-23 110.9 158 48.7
VMungo1383G2409 Vigna mungo HOM05D001334 ORTHO05D001119 4.1e-20 102.1 159 47.2
Nitab4.5_0003477g0010 Nicotiana tabacum HOM05D001334 ORTHO05D001119 2.0e-19 99.8 154 50.0
Nitab4.5_0000603g0060 Nicotiana tabacum HOM05D001334 ORTHO05D001119 2.7e-19 99.4 153 49.0
Phvul.001G137700 Phaseolus vulgaris HOM05D001334 ORTHO05D001119 6.0e-19 98.2 162 46.3
Peaxi162Scf00189g00073 Petunia axillaris HOM05D001334 ORTHO05D001119 7.8e-19 97.8 153 49.0
Lj2C376G1 Lonicera japonica HOM05D001334 ORTHO05D001119 1.7e-18 96.7 154 49.4
RcHm_v2.0_Chr3g0480801 Rosa chinensis HOM05D001334 ORTHO05D001119 6.6e-18 94.7 159 44.7
TWI32G0280 Tripterygium wilfordii HOM05D001334 ORTHO05D001119 8.6e-18 94.4 156 48.7
CSS0040096 Camellia sinensis var. sinensis HOM05D001334 ORTHO05D001119 1.1e-17 94.0 155 45.8
Lalb_Chr25g0287521 Lupinus albus HOM05D001334 ORTHO05D001119 1.1e-17 94.0 158 46.8
Duzib106G1996 Durio zibethinus HOM05D001334 ORTHO05D001119 1.5e-17 93.6 156 48.1
FvH4_6g23000 Fragaria vesca HOM05D001334 ORTHO05D001119 3.3e-17 92.4 159 45.9
CiPaw.10G029800 Carya illinoinensis HOM05D001334 ORTHO05D001119 4.3e-17 92.0 159 44.0
PGSC0003DMG400012931 Solanum tuberosum HOM05D001334 ORTHO05D001119 5.6e-17 91.7 150 46.7
Thecc.05G164900 Theobroma cacao HOM05D001334 ORTHO05D001119 7.3e-17 91.3 153 49.0
Ca_08489_v3 Cicer arietinum L. HOM05D001334 ORTHO05D001119 1.6e-16 90.1 142 50.0
vmacro07874 Vaccinium macrocarpon HOM05D001334 ORTHO05D001119 1.6e-16 90.1 158 46.8
Ciclev10004356m.g Citrus clementina HOM05D001334 ORTHO05D001119 2.8e-16 89.4 158 43.7
Sabra16G0055200 Salix brachista HOM05D001334 ORTHO05D001119 2.8e-16 89.4 165 44.2
FAN02G2844 Fragaria x ananassa HOM05D001334 ORTHO05D001119 1.4e-15 87.0 155 46.5
Psat3g070600 Pisum sativum HOM05D001334 ORTHO05D001119 3.1e-15 85.9 148 45.9
FAN05G0895 Fragaria x ananassa HOM05D001334 ORTHO05D001119 4.0e-15 85.5 159 44.0
FAN09G3832 Fragaria x ananassa HOM05D001334 ORTHO05D001119 8.9e-15 84.3 156 42.9
DCAR_013572 Daucus carota HOM05D001334 ORTHO05D001119 2.0e-14 83.2 162 41.4
MSTRG.6459 Avicennia marina HOM05D001334 ORTHO05D001119 2.6e-14 82.8 150 42.0
Solyc03g051790.3 Solanum lycopersicum HOM05D001334 ORTHO05D001119 2.6e-14 82.8 152 44.1
Sopen03g011160 Solanum pennellii HOM05D001334 ORTHO05D001119 9.8e-14 80.9 152 43.4
QL07p022045 Quercus lobata HOM05D001334 ORTHO05D001119 3.7e-13 79.0 128 44.5
Haze_19922 Corylus avellana HOM05D001334 ORTHO05D001119 4.9e-13 78.6 159 44.7
arahy.Tifrunner.gnm1.ann1.9EZ8VA Arachis hypogaea HOM05D001334 ORTHO05D001119 6.4e-13 78.2 162 44.4
CsaV3_4G031530 Cucumis sativus L. HOM05D001334 ORTHO05D001119 6.4e-13 78.2 156 37.8
Gohir.D09G121800 Gossypium hirsutum HOM05D001334 ORTHO05D001119 6.4e-13 78.2 156 44.9
arahy.Tifrunner.gnm1.ann1.C24CLM Arachis hypogaea HOM05D001334 ORTHO05D001119 1.1e-12 77.4 162 43.8
Gorai.006G139400 Gossypium raimondii HOM05D001334 ORTHO05D001119 1.4e-12 77.0 156 44.9
MD14G1064600 Malus domestica HOM05D001334 ORTHO05D001119 2.4e-12 76.3 155 41.3
ClCG04G000530 Citrullus lanatus HOM05D001334 ORTHO05D001119 5.4e-12 75.1 146 39.0
Rhsim03G0011200 Rhododendron simsii HOM05D001334 ORTHO05D001119 5.4e-12 75.1 152 42.8
MELO3C009076.2 Cucumis melo HOM05D001334 ORTHO05D001119 1.6e-11 73.6 156 36.5
MD12G1064400 Malus domestica HOM05D001334 ORTHO05D001119 1.6e-11 73.6 133 40.6
Duzib128G0715 Durio zibethinus HOM05D001334 ORTHO05D001119 3.5e-11 72.4 156 41.0
Eucgr.A02411 Eucalyptus grandis HOM05D001334 ORTHO05D001119 4.6e-11 72.0 130 50.0
Prupe.7G069500 Prunus persica HOM05D001334 ORTHO05D001119 1.7e-10 70.1 135 46.7
Hund24751 Selenicereus undatus HOM05D001334 ORTHO05D001119 8.6e-10 67.8 156 40.4
Oeu033770.2 Olea europaea HOM05D001334 ORTHO05D001119 1.5e-09 67.0 154 39.0
MSTRG.19886 Avicennia marina HOM05D001334 ORTHO05D001119 1.9e-09 66.6 155 40.0
Os09g0487200 Oryza sativa ssp. japonica HOM05D001334 ORTHO05D001119 1.9e-09 66.6 140 40.7
Zm00001eb316620 Zea mays HOM05D001334 ORTHO05D001119 2.5e-09 66.2 143 39.9
Glyma.03G140900 Glycine max HOM05D001334 ORTHO05D001119 4.3e-09 65.5 159 38.4
CAN.G44.14 Capsicum annuum HOM05D001334 ORTHO05D001119 4.7e-08 62.0 144 39.6
Lj1g0004478 Lotus japonicus HOM05D001334 ORTHO05D001119 4.7e-08 62.0 149 38.9
Gohir.A09G124800 Gossypium hirsutum HOM05D001334 ORTHO05D001119 2.3e-07 59.7 156 40.4
SalBow6G3510 Salvia bowleyana HOM05D001334 ORTHO05D001119 3.1e-07 59.3 154 40.3
Cc06_g16450 Coffea canephora HOM05D001334 ORTHO05D001119 4.0e-07 58.9 152 38.8
Sc13g0002030 Simmondsia chinensis HOM05D001334 ORTHO05D001119 4.0e-07 58.9 142 41.5
ATR0605G057 Amborella trichopoda HOM05D001334 ORTHO05D001119 3.4e-06 55.8 157 34.4


User provided reference genes

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