Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.7e-131 472.6 227 100.0
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 4.7e-110 401.4 228 82.9
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 2.1e-105 386.0 214 84.6
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 4.6e-105 384.8 230 80.4
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 1.0e-104 383.6 227 81.9
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 3.0e-104 382.1 230 79.6
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 3.0e-104 382.1 215 82.8
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 1.1e-103 380.2 229 79.0
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 1.1e-103 380.2 215 82.3
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 2.5e-103 379.0 199 86.4
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 7.3e-103 377.5 223 80.7
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 9.6e-103 377.1 214 82.2
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 2.8e-102 375.6 214 81.8
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 4.7e-102 374.8 214 81.8
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 4.7e-102 374.8 220 81.4
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 1.8e-101 372.9 215 80.5
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 1.8e-101 372.9 214 81.8
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 2.4e-101 372.5 217 80.2
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 3.1e-101 372.1 215 80.5
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 8.9e-101 370.5 227 76.7
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 2.0e-100 369.4 216 80.6
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 2.0e-100 369.4 212 80.7
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.6e-100 369.0 215 80.5
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.6e-100 369.0 215 80.0
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 4.4e-100 368.2 230 76.5
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 4.4e-100 368.2 221 77.4
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 5.8e-100 367.9 228 77.6
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 7.6e-100 367.5 221 78.7
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 1.3e-99 366.7 216 80.1
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 1.7e-99 366.3 216 80.1
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 2.2e-99 365.9 214 80.8
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 2.9e-99 365.5 215 79.5
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 4.9e-99 364.8 215 80.0
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 4.9e-99 364.8 213 79.3
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 4.9e-99 364.8 222 79.3
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 6.4e-99 364.4 214 79.9
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 6.4e-99 364.4 235 74.5
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 8.4e-99 364.0 222 79.3
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 8.4e-99 364.0 215 78.1
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 1.1e-98 363.6 215 77.2
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 1.9e-98 362.8 214 77.6
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 3.2e-98 362.1 214 78.5
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 3.2e-98 362.1 207 77.8
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 4.2e-98 361.7 214 78.0
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 5.4e-98 361.3 222 78.8
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 7.1e-98 360.9 216 76.9
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 9.3e-98 360.5 214 78.0
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 9.3e-98 360.5 214 77.1
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 1.2e-97 360.1 214 77.6
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 1.6e-97 359.8 206 80.1
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 1.6e-97 359.8 213 78.4
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 2.1e-97 359.4 213 77.0
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 4.6e-97 358.2 213 77.9
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 1.0e-96 357.1 211 77.7
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 1.3e-96 356.7 212 76.4
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 3.9e-96 355.1 227 73.1
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 6.6e-96 354.4 200 80.5
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 1.5e-95 353.2 223 75.8
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 1.5e-95 353.2 203 81.3
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 5.6e-95 351.3 215 74.9
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 9.6e-95 350.5 213 76.5
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 4.8e-94 348.2 217 75.6
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 3.1e-93 345.5 214 77.6
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 2.2e-91 339.3 213 74.2
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 2.9e-91 339.0 214 77.6
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 2.9e-91 339.0 213 75.6
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 3.8e-91 338.6 205 78.5
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 3.8e-91 338.6 205 78.5
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 3.8e-91 338.6 205 78.5
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 4.9e-91 338.2 212 72.2
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 8.4e-91 337.4 213 77.5
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 1.4e-90 336.7 205 79.0
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 2.4e-90 335.9 206 78.2
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 5.4e-90 334.7 203 79.3
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 1.2e-89 333.6 186 81.2
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 2.1e-89 332.8 178 87.1
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 4.6e-89 331.6 233 71.7
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 7.8e-89 330.9 215 76.3
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 7.8e-89 330.9 178 84.8
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 1.0e-88 330.5 215 75.8
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 1.0e-88 330.5 215 75.8
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 6.6e-88 327.8 198 75.8
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 2.6e-84 315.8 196 74.5
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 1.1e-82 310.5 271 57.9
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 3.5e-81 305.4 227 70.9
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 3.7e-78 295.4 215 67.4
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 8.1e-78 294.3 180 77.8
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 3.8e-75 285.4 184 71.7
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 2.1e-70 269.6 214 57.9
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 3.7e-70 268.9 145 81.4
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 3.7e-70 268.9 161 77.6
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 2.5e-66 256.1 214 63.1
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 3.3e-63 245.7 207 59.4
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 4.1e-61 238.8 196 53.1
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 7.7e-60 234.6 214 52.3
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 2.2e-59 233.0 130 83.8
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 2.2e-59 233.0 140 77.1
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 1.5e-55 220.3 127 77.2
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 2.2e-46 189.9 133 67.7
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 1.4e-45 187.2 115 75.7
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 2.6e-44 183.0 158 53.8
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 1.7e-43 180.3 103 78.6
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 2.6e-39 166.4 213 39.0
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 1.5e-34 150.6 128 61.7
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 1.2e-33 147.5 128 59.4
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 8.8e-32 141.4 216 32.4
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 6.3e-30 135.2 83 72.3
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 1.8e-29 133.7 110 57.3
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 5.9e-28 128.6 170 32.9
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 7.7e-28 128.3 78 73.1
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 1.7e-27 127.1 89 68.5
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 2.8e-22 109.8 67 77.6
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 8.3e-22 108.2 58 75.9
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 9.1e-21 104.8 51 90.2
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 1.0e-16 91.3 71 62.0
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 1.7e-11 73.9 58 72.4
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 1.5e-10 70.9 57 57.9
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 4.7e-09 65.9 94 45.7


User provided reference genes

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