Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR185G0002 Trochodendron aralioides HOM05D008437 ORTHO05D008819 5.1e-243 844.0 419 100.0
TAR185G0005 Trochodendron aralioides HOM05D008437 ORTHO05D008819 3.2e-136 489.2 424 64.9
TAR629G0100 Trochodendron aralioides HOM05D008437 ORTHO05D008819 2.4e-120 436.4 422 58.8
TAR575G0001 Trochodendron aralioides HOM05D008437 ORTHO05D008819 8.7e-118 427.9 443 56.4
TAR629G0642 Trochodendron aralioides HOM05D008437 ORTHO05D008819 2.5e-40 170.6 93 89.2
Nn1g09856 Nelumbo nucifera HOM05D006664 ORTHO05D009007 4.0e-14 83.6 310 22.6
TAR623G0051 Trochodendron aralioides HOM05D008437 ORTHO05D008819 5.3e-14 83.2 142 34.5
TAR636G0594 Trochodendron aralioides HOM05D006664 ORTHO05D008819 4.5e-13 80.1 98 43.9
Nn1g09439 Nelumbo nucifera HOM05D006664 ORTHO05D008819 1.4e-11 75.1 329 22.2
Rhsim08G0071800 Rhododendron simsii HOM05D006664 ORTHO05D009007 2.4e-11 74.3 67 53.7
Haze_21353 Corylus avellana HOM05D007726 ORTHO05D008819 1.3e-09 68.6 127 35.4
Dinv24637 Davidia involucrata HOM05D007726 ORTHO05D008819 3.0e-09 67.4 112 32.1
Haze_21347 Corylus avellana HOM05D007726 ORTHO05D008819 3.9e-09 67.0 127 34.6
Nn8g40182 Nelumbo nucifera HOM05D008437 ORTHO05D008819 5.1e-09 66.6 128 30.5
Cfa012989 Carpinus fangiana HOM05D007726 ORTHO05D008819 6.7e-09 66.2 124 33.1
Lj7A388T90 Lonicera japonica HOM05D007726 ORTHO05D008819 8.7e-09 65.9 131 30.5
CiPaw.07G234400 Carya illinoinensis HOM05D007726 ORTHO05D008819 1.1e-08 65.5 75 42.7
Dinv41784 Davidia involucrata HOM05D007726 ORTHO05D008819 1.1e-08 65.5 71 43.7
Actinidia34726 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.5e-08 65.1 52 55.8
CSS0006076 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 2.5e-08 64.3 63 50.8
CSS0029898 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 2.5e-08 64.3 63 50.8
ClCG09G010150 Citrullus lanatus HOM05D007726 ORTHO05D008819 2.5e-08 64.3 65 41.5
FAN08G0648 Fragaria x ananassa HOM05D007726 ORTHO05D008819 3.3e-08 63.9 84 36.9
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 3.3e-08 63.9 92 38.0
Sed0014390 Sechium edule HOM05D007726 ORTHO05D008819 3.3e-08 63.9 129 31.0
Dinv12850 Davidia involucrata HOM05D006664 ORTHO05D009007 7.4e-08 62.8 63 50.8
Nn1g09442 Nelumbo nucifera HOM05D007726 ORTHO05D008819 7.4e-08 62.8 71 45.1
Ciclev10020327m.g Citrus clementina HOM05D007726 ORTHO05D008819 9.6e-08 62.4 117 27.4
RcHm_v2.0_Chr7g0225531 Rosa chinensis HOM05D007726 ORTHO05D008819 9.6e-08 62.4 96 35.4
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 1.3e-07 62.0 78 43.6
Prupe.1G556700 Prunus persica HOM05D007726 ORTHO05D008819 1.3e-07 62.0 93 38.7
Cc10_g11210 Coffea canephora HOM05D007726 ORTHO05D008819 2.1e-07 61.2 68 47.1
Medtr4g023090 Medicago truncatula HOM05D000007 ORTHO05D000017 2.1e-07 61.2 50 50.0
MELO3C024088.2 Cucumis melo HOM05D007726 ORTHO05D008819 2.8e-07 60.8 149 29.5
CsaV3_7G024580 Cucumis sativus L. HOM05D007726 ORTHO05D008819 2.8e-07 60.8 146 28.1
FvH4_5g30670 Fragaria vesca HOM05D007726 ORTHO05D008819 2.8e-07 60.8 84 35.7
FAN13G1334 Fragaria x ananassa HOM05D007726 ORTHO05D008819 2.8e-07 60.8 112 32.1
FAN18G4305 Fragaria x ananassa HOM05D007726 ORTHO05D008819 2.8e-07 60.8 84 35.7
HanXRQChr11g0353911 Helianthus annuus HOM05D007162 ORTHO05D007631 3.7e-07 60.5 212 28.3
Os12g0164300 Oryza sativa ssp. japonica HOM05D000007 ORTHO05D000017 3.7e-07 60.5 56 44.6
CiPaw.08G003800 Carya illinoinensis HOM05D007726 ORTHO05D008819 4.8e-07 60.1 73 37.0
Oeu000542.1 Olea europaea HOM05D007726 ORTHO05D008819 4.8e-07 60.1 82 35.4
Rhsim07G0046100 Rhododendron simsii HOM05D006664 ORTHO05D009007 4.8e-07 60.1 76 42.1
FvH4_5g31300 Fragaria vesca HOM05D007726 ORTHO05D008819 6.2e-07 59.7 110 33.6
Nn2g13599 Nelumbo nucifera HOM05D008437 ORTHO05D008819 6.2e-07 59.7 81 37.0
CSS0013132 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 8.1e-07 59.3 76 42.1
Aqoxy5G04107 Aquilegia oxysepala HOM05D006664 ORTHO05D008819 1.1e-06 58.9 64 43.8
Atru.chr13.2339 Acer truncatum HOM05D007726 ORTHO05D008819 1.4e-06 58.5 97 33.0
Nn1g09443 Nelumbo nucifera HOM05D007726 ORTHO05D008819 1.4e-06 58.5 55 47.3
TPR.G30334 Trifolium pratense HOM05D000007 ORTHO05D000017 1.4e-06 58.5 67 46.3
Dinv07586 Davidia involucrata HOM05D006664 ORTHO05D009007 1.8e-06 58.2 66 48.5
Lj6A793G95 Lonicera japonica HOM05D006664 ORTHO05D009007 1.8e-06 58.2 56 48.2
TPR.G19021 Trifolium pratense HOM05D000007 ORTHO05D000017 1.8e-06 58.2 73 38.4
Actinidia38558 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.4e-06 57.8 63 47.6
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 3.1e-06 57.4 110 32.7
Aqoxy5G03353 Aquilegia oxysepala HOM05D007726 ORTHO05D008819 4.0e-06 57.0 99 34.3
MSTRG.25451 Avicennia marina HOM05D007726 ORTHO05D008819 4.0e-06 57.0 88 29.5
Migut.N02092 Erythranthe guttata HOM05D006664 ORTHO05D009007 4.0e-06 57.0 272 26.1
RcHm_v2.0_Chr7g0231221 Rosa chinensis HOM05D007726 ORTHO05D008819 4.0e-06 57.0 91 36.3
Migut.B01776 Erythranthe guttata HOM05D006664 ORTHO05D009007 5.3e-06 56.6 151 27.2
Lj6C661G23 Lonicera japonica HOM05D000007 ORTHO05D000017 5.3e-06 56.6 56 50.0
Lalb_Chr15g0087251 Lupinus albus HOM05D000007 ORTHO05D000017 5.3e-06 56.6 59 45.8
Medtr4g023380 Medicago truncatula HOM05D000007 ORTHO05D000017 5.3e-06 56.6 50 48.0
QL09p021327 Quercus lobata HOM05D000007 ORTHO05D000039 5.3e-06 56.6 181 29.3
RcHm_v2.0_Chr7g0218791 Rosa chinensis HOM05D007726 ORTHO05D008819 5.3e-06 56.6 69 40.6
HanXRQChr17g0565271 Helianthus annuus HOM05D007726 ORTHO05D008819 9.0e-06 55.8 79 36.7
Hma1.2p1_0244F.1_g101190 Hydrangea macrophylla HOM05D008437 ORTHO05D010577 9.0e-06 55.8 95 33.7
Lalb_Chr20g0118311 Lupinus albus HOM05D000007 ORTHO05D000017 9.0e-06 55.8 89 34.8
Peaxi162Scf00048g01819 Petunia axillaris HOM05D000007 ORTHO05D000017 9.0e-06 55.8 108 32.4
TPR.G29656 Trifolium pratense HOM05D000007 ORTHO05D000017 9.0e-06 55.8 98 34.7


User provided reference genes

Program Settings