Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR178G0002 Trochodendron aralioides HOM05D003814 ORTHO05D004399 7.6e-52 206.8 101 100.0
TAR178G0001 Trochodendron aralioides HOM05D003814 ORTHO05D004399 9.3e-34 146.7 97 74.2
TAR624G1373 Trochodendron aralioides HOM05D003814 ORTHO05D004399 2.1e-33 145.6 97 73.2
TAR636G0432 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.9e-26 122.5 89 69.7
TAR374G0716 Trochodendron aralioides HOM05D003814 ORTHO05D004399 4.1e-21 104.8 86 61.6
TAR626G0895 Trochodendron aralioides HOM05D003814 ORTHO05D004399 6.9e-21 104.0 84 63.1
TAR626G0622 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.5e-20 102.8 86 60.5
Dinv25578 Davidia involucrata HOM05D003814 ORTHO05D004399 8.8e-16 87.0 91 50.5
Thecc.09G080800 Theobroma cacao HOM05D003814 ORTHO05D004399 4.4e-15 84.7 87 46.0
Potri.010G224400 Populus trichocarpa HOM05D003814 ORTHO05D004399 4.1e-13 78.2 91 44.0
Aqoxy5G02065 Aquilegia oxysepala HOM05D003814 ORTHO05D004399 1.2e-12 76.6 93 46.2
Potri.014G187100 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.6e-12 76.3 87 48.3
Duzib187G0024 Durio zibethinus HOM05D003814 ORTHO05D004399 2.6e-12 75.5 89 43.8
Manes.04G143500 Manihot esculenta HOM05D003814 ORTHO05D004399 2.6e-12 75.5 85 43.5
TWI53G0525 Tripterygium wilfordii HOM05D003814 ORTHO05D004399 2.6e-12 75.5 78 47.4
Potri.008G038000 Populus trichocarpa HOM05D003814 ORTHO05D004399 4.5e-12 74.7 85 44.7
Sabra02G0022400 Salix brachista HOM05D003814 ORTHO05D004399 7.7e-12 73.9 90 44.4
Hma1.2p1_0169F.1_g074710 Hydrangea macrophylla HOM05D003814 ORTHO05D004399 1.0e-11 73.6 92 50.0
CiPaw.04G145600 Carya illinoinensis HOM05D003814 ORTHO05D004399 1.7e-11 72.8 80 42.5
FvH4_1g08170 Fragaria vesca HOM05D003814 ORTHO05D004399 1.7e-11 72.8 83 44.6
FAN19G0873 Fragaria x ananassa HOM05D003814 ORTHO05D004399 1.7e-11 72.8 83 44.6
Duzib168G0557 Durio zibethinus HOM05D003814 ORTHO05D004399 2.2e-11 72.4 92 41.3
Nitab4.5_0000073g0260 Nicotiana tabacum HOM05D003814 ORTHO05D004399 2.9e-11 72.0 77 48.1
PSO478G4598 Papaver somniferum HOM05D003814 ORTHO05D004399 2.9e-11 72.0 87 41.4
PSO017G6459 Papaver somniferum HOM05D003814 ORTHO05D004399 3.8e-11 71.6 87 41.4
Gohir.D04G024036 Gossypium hirsutum HOM05D003814 ORTHO05D004399 5.0e-11 71.2 90 42.2
Potri.008G214000 Populus trichocarpa HOM05D003814 ORTHO05D004399 5.0e-11 71.2 89 43.8
Gohir.D04G029200 Gossypium hirsutum HOM05D003814 ORTHO05D004399 8.5e-11 70.5 90 42.2
Gorai.012G033100 Gossypium raimondii HOM05D003814 ORTHO05D004399 1.1e-10 70.1 90 42.2
Potri.006G167500 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.1e-10 70.1 86 44.2
Potri.007G037500 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.1e-10 70.1 86 45.3
Gohir.A07G014250 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.5e-10 69.7 98 39.8
Zm00001eb202740 Zea mays HOM05D003814 ORTHO05D004399 1.9e-10 69.3 85 43.5
FAN26G2103 Fragaria x ananassa HOM05D003814 ORTHO05D004399 2.5e-10 68.9 83 42.2
FAN26G3410 Fragaria x ananassa HOM05D003814 ORTHO05D004399 2.5e-10 68.9 83 42.2
FAN28G0169 Fragaria x ananassa HOM05D003814 ORTHO05D004399 2.5e-10 68.9 83 42.2
Gohir.A07G014200 Gossypium hirsutum HOM05D003814 ORTHO05D004399 2.5e-10 68.9 98 38.8
PGR004G0767 Punica granatum HOM05D003814 ORTHO05D004399 2.5e-10 68.9 85 42.4
Thecc.06G118300 Theobroma cacao HOM05D003814 ORTHO05D004399 2.5e-10 68.9 70 47.1
Cfa001318 Carpinus fangiana HOM05D003814 ORTHO05D004399 4.2e-10 68.2 89 39.3
CiPaw.01G298600 Carya illinoinensis HOM05D003814 ORTHO05D004399 4.2e-10 68.2 92 41.3
Gohir.D04G023700 Gossypium hirsutum HOM05D003814 ORTHO05D004399 4.2e-10 68.2 90 40.0
FAN23G2856 Fragaria x ananassa HOM05D003814 ORTHO05D004399 7.2e-10 67.4 80 42.5
Potri.017G066400 Populus trichocarpa HOM05D003814 ORTHO05D004399 7.2e-10 67.4 86 44.2
Gorai.003G018600 Gossypium raimondii HOM05D003814 ORTHO05D004399 1.2e-09 66.6 64 45.3
Peaxi162Scf00928g00024 Petunia axillaris HOM05D003814 ORTHO05D004399 1.2e-09 66.6 78 44.9
MD15G1214100 Malus domestica HOM05D003814 ORTHO05D004399 1.6e-09 66.2 79 41.8
SalBow1G2869 Salvia bowleyana HOM05D001856 ORTHO05D001959 1.6e-09 66.2 76 46.1
Prupe.7G202800 Prunus persica HOM05D003814 ORTHO05D004399 8.0e-09 63.9 78 44.9
Ciclev10007128m.g Citrus clementina HOM05D003814 ORTHO05D004399 1.0e-08 63.5 89 38.2
PSO170G6690 Papaver somniferum HOM05D003814 ORTHO05D004399 1.0e-08 63.5 85 44.7
Cc08_g07160 Coffea canephora HOM05D003814 ORTHO05D004399 1.8e-08 62.8 72 45.8
RcHm_v2.0_Chr2g0094241 Rosa chinensis HOM05D003814 ORTHO05D004399 1.8e-08 62.8 87 40.2
CAN.G625.43 Capsicum annuum HOM05D003814 ORTHO05D004399 3.0e-08 62.0 78 44.9
Gohir.D03G018166 Gossypium hirsutum HOM05D003814 ORTHO05D004399 6.7e-08 60.8 64 43.8
Migut.E01439 Erythranthe guttata HOM05D003814 ORTHO05D004399 8.8e-08 60.5 69 43.5
Gohir.A02G162300 Gossypium hirsutum HOM05D003814 ORTHO05D004399 8.8e-08 60.5 60 45.0
MD15G1214200 Malus domestica HOM05D003814 ORTHO05D004399 8.8e-08 60.5 80 46.2
Gohir.D03G018133 Gossypium hirsutum HOM05D003814 ORTHO05D004399 2.6e-07 58.9 60 45.0
Gorai.003G018500 Gossypium raimondii HOM05D003814 ORTHO05D004399 2.6e-07 58.9 60 45.0
QL05p073999 Quercus lobata HOM05D003814 ORTHO05D004399 2.6e-07 58.9 84 35.7
Haze_11118 Corylus avellana HOM05D003814 ORTHO05D004399 3.3e-07 58.5 90 38.9
PGR004G1882 Punica granatum HOM05D003814 ORTHO05D004399 3.3e-07 58.5 85 38.8
COL.COLO4_18129 Corchorus olitorius HOM05D003814 ORTHO05D004399 4.4e-07 58.2 67 38.8
PGSC0003DMG400041501 Solanum tuberosum HOM05D003814 ORTHO05D004399 1.3e-06 56.6 84 39.3
Haze_08071 Corylus avellana HOM05D003814 ORTHO05D004399 1.7e-06 56.2 90 36.7
Gohir.A05G386550 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.7e-06 56.2 71 40.8
BcaC04g22552 Brassica carinata HOM05D003814 ORTHO05D004399 3.7e-06 55.1 90 33.3
BolC9t54693H Brassica oleracea HOM05D003814 ORTHO05D004399 3.7e-06 55.1 90 33.3
Haze_11119 Corylus avellana HOM05D003814 ORTHO05D004399 3.7e-06 55.1 90 37.8
BraA09t37130Z Brassica rapa HOM05D003814 ORTHO05D004399 4.8e-06 54.7 90 33.3


User provided reference genes

Program Settings