Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 2.5e-60 235.7 163 100.0
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 4.3e-20 102.1 162 44.4
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 3.6e-19 99.0 160 40.6
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 8.0e-19 97.8 164 49.4
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 3.1e-18 95.9 162 39.5
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 6.8e-18 94.7 152 53.9
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 5.8e-17 91.7 157 37.6
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 9.8e-17 90.9 164 40.2
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 1.3e-16 90.5 152 40.8
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 3.7e-16 89.0 156 39.7
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 6.4e-16 88.2 163 39.3
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 1.4e-15 87.0 160 36.9
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 1.9e-15 86.7 156 39.1
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 4.1e-15 85.5 171 40.9
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 5.4e-15 85.1 158 40.5
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 3.5e-14 82.4 163 38.0
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 3.5e-14 82.4 161 39.1
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 6.0e-14 81.6 167 39.5
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 7.8e-14 81.3 159 40.9
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 1.0e-13 80.9 158 34.2
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 1.0e-13 80.9 166 38.6
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.3e-13 80.5 161 42.9
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 3.0e-13 79.3 168 37.5
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 5.0e-13 78.6 193 44.0
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 1.1e-12 77.4 162 37.0
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 1.5e-12 77.0 149 57.0
MBI02_g19252_MAGBIO Magnolia biondii HOM05D006722 ORTHO05D007944 1.9e-12 76.6 69 53.6
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 1.9e-12 76.6 150 48.0
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.5e-12 76.3 165 36.4
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 2.5e-12 76.3 159 43.4
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 5.6e-12 75.1 156 37.8
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 5.6e-12 75.1 148 36.5
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 9.5e-12 74.3 153 38.6
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 9.5e-12 74.3 148 37.8
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 9.5e-12 74.3 164 40.9
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 1.2e-11 73.9 144 37.5
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.6e-11 73.6 159 35.8
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.6e-11 73.6 161 35.4
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 1.6e-11 73.6 148 37.8
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 2.1e-11 73.2 153 35.3
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 2.1e-11 73.2 153 35.3
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 4.7e-11 72.0 173 33.5
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 4.7e-11 72.0 144 43.8
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 8.0e-11 71.2 164 36.0
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 1.8e-10 70.1 153 38.6
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 2.3e-10 69.7 158 34.2
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 3.1e-10 69.3 155 33.5
Phvul.005G106200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 3.1e-10 69.3 162 51.2
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 4.0e-10 68.9 155 48.4
Cc05_g06730 Coffea canephora HOM05D006722 ORTHO05D007944 1.2e-09 67.4 162 42.6
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 1.2e-09 67.4 157 36.3
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 1.5e-09 67.0 147 49.7
VMungo1080G0484 Vigna mungo HOM05D006722 ORTHO05D007944 2.6e-09 66.2 157 39.5
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 7.5e-09 64.7 163 35.6
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 9.8e-09 64.3 168 35.1
Ca_05301_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 1.3e-08 63.9 166 39.2
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 2.2e-08 63.2 161 34.8
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 2.2e-08 63.2 161 34.8
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 2.2e-08 63.2 161 34.8
QL08p037794 Quercus lobata HOM05D006722 ORTHO05D007944 3.7e-08 62.4 73 54.8
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 8.3e-08 61.2 161 31.7
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 1.4e-07 60.5 158 45.6
Actinidia11069 Actinidia chinensis HOM05D006722 ORTHO05D007944 1.9e-07 60.1 65 49.2
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 1.9e-07 60.1 185 34.1
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 2.4e-07 59.7 154 31.2
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 7.1e-07 58.2 150 32.0
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 7.1e-07 58.2 117 35.9
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 9.2e-07 57.8 157 38.2
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 9.2e-07 57.8 169 29.6


User provided reference genes

Program Settings