Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.0e-126 454.1 220 100.0
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 6.0e-126 454.1 220 100.0
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 3.8e-88 328.6 211 73.5
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 6.7e-85 317.8 217 72.4
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.8e-82 309.7 167 85.6
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 4.0e-82 308.5 167 86.8
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 9.0e-82 307.4 166 83.7
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 8.4e-80 300.8 169 82.8
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 1.1e-79 300.4 166 84.3
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 6.0e-78 294.7 163 82.2
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 7.9e-78 294.3 163 82.8
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 7.9e-78 294.3 168 83.3
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 7.9e-78 294.3 169 82.8
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 7.9e-78 294.3 164 82.3
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 1.8e-77 293.1 171 80.1
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 1.5e-76 290.0 167 82.0
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 1.5e-76 290.0 165 79.4
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 2.5e-76 289.3 167 79.6
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 7.4e-76 287.7 162 81.5
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.6e-75 286.6 169 78.1
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 2.8e-75 285.8 165 77.6
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 6.3e-75 284.6 165 80.0
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 8.2e-75 284.3 169 77.5
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 8.2e-75 284.3 164 79.9
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 2.6e-73 279.3 165 77.6
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 2.6e-73 279.3 167 76.6
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.9e-73 278.1 169 75.1
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 5.9e-73 278.1 167 76.0
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 1.0e-72 277.3 163 80.4
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.0e-72 277.3 169 77.5
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.3e-72 276.9 165 78.2
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.3e-72 276.9 167 77.8
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.3e-72 276.9 169 74.6
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 2.2e-72 276.2 168 76.8
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 3.8e-72 275.4 165 75.8
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 3.8e-72 275.4 167 76.6
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 5.0e-72 275.0 165 78.2
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 6.5e-72 274.6 169 74.0
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 1.4e-71 273.5 168 77.4
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.9e-71 273.1 169 75.1
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.5e-71 272.7 169 76.9
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 4.2e-71 271.9 167 73.7
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 1.2e-70 270.4 165 75.8
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.2e-70 270.4 167 74.3
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.2e-70 270.4 170 71.8
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 3.6e-70 268.9 167 76.6
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 3.6e-70 268.9 166 74.7
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 1.0e-69 267.3 165 75.8
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 1.0e-69 267.3 166 78.3
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.8e-69 266.5 170 70.6
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 2.3e-69 266.2 168 75.0
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 1.1e-68 263.8 164 76.8
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 3.3e-68 262.3 165 71.5
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 7.4e-68 261.2 166 70.5
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 7.4e-68 261.2 168 72.6
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 7.4e-68 261.2 164 72.0
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 9.7e-68 260.8 167 71.9
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 1.1e-66 257.3 166 74.1
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.8e-66 256.5 170 72.9
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.8e-66 256.5 169 72.8
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 1.8e-66 256.5 167 73.1
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 2.4e-66 256.1 167 70.7
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.4e-66 256.1 167 70.7
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 2.4e-66 256.1 165 69.7
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 3.1e-66 255.8 166 73.5
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 5.3e-66 255.0 166 69.9
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 5.3e-66 255.0 169 71.0
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 6.9e-66 254.6 161 72.0
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 9.0e-66 254.2 160 70.6
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 1.2e-65 253.8 165 68.5
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 2.0e-65 253.1 165 69.7
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 2.0e-65 253.1 166 69.3
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 4.5e-65 251.9 165 69.1
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 4.5e-65 251.9 162 71.0
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 7.2e-63 244.6 165 69.7
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 6.1e-62 241.5 165 67.9
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 7.9e-62 241.1 165 67.9
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 1.8e-61 240.0 169 68.6
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 6.7e-61 238.0 167 69.5
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 8.8e-61 237.7 169 68.0
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 8.8e-61 237.7 162 69.1
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 1.1e-60 237.3 167 68.9
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.5e-60 236.9 170 70.0
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 5.7e-60 235.0 169 68.0
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 1.1e-58 230.7 159 70.4
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 4.1e-58 228.8 142 75.4
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 1.2e-57 227.3 141 74.5
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 1.5e-57 226.9 140 72.1
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 3.4e-57 225.7 169 66.3
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 1.3e-56 223.8 140 71.4
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.4e-55 220.3 171 63.7
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.9e-55 219.9 143 69.2
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 4.2e-55 218.8 167 61.1
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 5.5e-55 218.4 169 64.5
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 9.4e-55 217.6 166 62.7
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 9.4e-55 217.6 166 65.7
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 2.7e-54 216.1 129 78.3
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 1.0e-53 214.2 171 63.7
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 3.0e-53 212.6 167 59.3
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.5e-52 210.3 164 58.5
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.6e-49 200.3 174 58.6
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 7.7e-49 198.0 133 68.4
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 6.5e-48 194.9 176 59.1
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.6e-46 190.3 118 72.0
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 2.3e-45 186.4 161 52.8
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 1.7e-43 180.3 161 55.3
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 3.1e-42 176.0 156 57.7
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 5.9e-41 171.8 161 49.7
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 3.2e-39 166.0 165 47.3
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 2.7e-38 162.9 149 54.4
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 8.3e-35 151.4 90 82.2
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.1e-34 151.0 168 50.0
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.7e-32 143.7 146 50.0
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 2.9e-32 142.9 132 57.6
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.1e-31 141.0 85 76.5
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 8.0e-30 134.8 110 62.7
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 2.5e-23 113.2 153 44.4
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.6e-20 103.2 93 58.1
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 2.8e-14 83.2 119 42.0
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 1.3e-11 74.3 44 72.7


User provided reference genes

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