Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR129G0002 Trochodendron aralioides HOM05D007305 ORTHO05D009886 5.4e-63 244.2 127 100.0
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 3.4e-25 118.6 89 68.5
vmacro15092 Vaccinium macrocarpon HOM05D005784 ORTHO05D007803 5.8e-25 117.9 89 67.4
vmacro23149 Vaccinium macrocarpon HOM05D064014 ORTHO05D000047 2.9e-24 115.5 89 67.4
vmacro05088 Vaccinium macrocarpon HOM05D003985 ORTHO05D005253 3.2e-23 112.1 86 66.3
vmacro09324 Vaccinium macrocarpon HOM05D001891 ORTHO05D004048 6.0e-22 107.8 88 64.8
Eucgr.G01582 Eucalyptus grandis HOM05D000002 ORTHO05D000047 5.9e-17 91.3 77 53.2
Eucgr.H03782 Eucalyptus grandis HOM05D000002 ORTHO05D000047 3.8e-16 88.6 77 51.9
vmacro22529 Vaccinium macrocarpon HOM05D004082 ORTHO05D004729 2.7e-14 82.4 77 55.8
CiPaw.13G082800 Carya illinoinensis HOM05D023524 ORTHO05D000001 6.3e-11 71.2 93 38.7
Sabra18G0102700 Salix brachista HOM05D007305 ORTHO05D009886 4.1e-10 68.6 85 40.0
vmacro05505 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 6.9e-10 67.8 85 38.8
COL.COLO4_11287 Corchorus olitorius HOM05D000028 ORTHO05D000701 1.5e-09 66.6 103 37.9
vmacro03330 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 2.0e-09 66.2 114 32.5
Oeu036242.1 Olea europaea HOM05D007305 ORTHO05D009886 3.4e-09 65.5 74 44.6
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 7.7e-09 64.3 83 38.6
Sabra07G0082100 Salix brachista HOM05D007305 ORTHO05D009886 7.7e-09 64.3 96 36.5
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 7.7e-09 64.3 96 36.5
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 7.7e-09 64.3 96 36.5
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 7.7e-09 64.3 96 36.5
vmacro07032 Vaccinium macrocarpon HOM05D030287 ORTHO05D018099 1.7e-08 63.2 63 42.9
vmacro12534 Vaccinium macrocarpon HOM05D000671 ORTHO05D004414 2.9e-08 62.4 80 37.5
vmacro13138 Vaccinium macrocarpon HOM05D001282 ORTHO05D009886 2.9e-08 62.4 69 39.1
Rhsim06G0127400 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.8e-08 62.0 82 36.6
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 3.8e-08 62.0 85 40.0
vmacro14864 Vaccinium macrocarpon HOM05D001069 ORTHO05D009886 5.0e-08 61.6 71 36.6
vmacro13137 Vaccinium macrocarpon HOM05D001282 ORTHO05D001236 6.5e-08 61.2 91 34.1
vmacro17584 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 6.5e-08 61.2 67 40.3
vmacro22188 Vaccinium macrocarpon HOM05D005356 ORTHO05D006596 8.5e-08 60.8 63 39.7
CANSAT78G2514 Cannabis sativa HOM05D007305 ORTHO05D009886 1.4e-07 60.1 79 36.7
SHI07334 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-07 60.1 89 39.3
SEGI_41209 Sequoiadendron giganteum HOM05D001800 ORTHO05D000047 1.4e-07 60.1 83 42.2
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 1.4e-07 60.1 67 40.3
CiPaw.06G060800 Carya illinoinensis HOM05D007305 ORTHO05D000001 2.5e-07 59.3 77 39.0
SEGI_10748 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.5e-07 59.3 81 37.0
Manes.02G211261 Manihot esculenta HOM05D007305 ORTHO05D009886 3.2e-07 58.9 77 41.6
Manes.13G089260 Manihot esculenta HOM05D007305 ORTHO05D009886 3.2e-07 58.9 102 35.3
PSO384G1714 Papaver somniferum HOM05D000002 ORTHO05D000047 5.5e-07 58.2 85 37.6
PSO675G4970 Papaver somniferum HOM05D000002 ORTHO05D000047 5.5e-07 58.2 83 39.8
Rhsim08G0117000 Rhododendron simsii HOM05D002269 ORTHO05D002421 5.5e-07 58.2 87 37.9
CiPaw.06G151000 Carya illinoinensis HOM05D007305 ORTHO05D009886 7.2e-07 57.8 83 30.1
Manes.09G019650 Manihot esculenta HOM05D007305 ORTHO05D009886 7.2e-07 57.8 69 43.5
vmacro22644 Vaccinium macrocarpon HOM05D000083 ORTHO05D001732 7.2e-07 57.8 86 32.6
vmacro23376 Vaccinium macrocarpon HOM05D001558 ORTHO05D003061 7.2e-07 57.8 86 36.0
RcHm_v2.0_Chr4g0388371 Rosa chinensis HOM05D000002 ORTHO05D000047 9.4e-07 57.4 82 34.1
Ciclev10017996m.g Citrus clementina HOM05D000002 ORTHO05D000047 1.2e-06 57.0 63 39.7
MBI06_g08186_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000047 1.2e-06 57.0 83 37.3
SEGI_17012 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.2e-06 57.0 83 39.8
Oeu019665.1 Olea europaea HOM05D029785 ORTHO05D000001 1.6e-06 56.6 56 46.4
Sopen11g020850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-06 56.6 72 36.1
Migut.K01133 Erythranthe guttata HOM05D000002 ORTHO05D000047 2.1e-06 56.2 81 35.8
MBI15_g12401_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000047 2.1e-06 56.2 73 38.4
Manes.13G079525 Manihot esculenta HOM05D007305 ORTHO05D009886 2.1e-06 56.2 77 40.3
SEGI_27629 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.1e-06 56.2 82 37.8
Sopen01g029030 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 56.2 85 35.3
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 2.7e-06 55.8 96 34.4
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 2.7e-06 55.8 66 37.9
PSO732G0713 Papaver somniferum HOM05D000002 ORTHO05D000047 3.6e-06 55.5 83 38.6
SEGI_28989 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.6e-06 55.5 82 37.8
Sopen12g009620 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.5 72 31.9
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 4.7e-06 55.1 81 42.0
Sed0002096 Sechium edule HOM05D007305 ORTHO05D009886 4.7e-06 55.1 60 45.0
TWI56G0827 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 4.7e-06 55.1 111 36.9
vmacro10451 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 4.7e-06 55.1 92 35.9
PSO339G4703 Papaver somniferum HOM05D000002 ORTHO05D000001 6.1e-06 54.7 72 40.3
SHI07176 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-06 54.7 66 37.9
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-06 54.7 73 35.6
Sopen07g006560 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 54.7 67 38.8


User provided reference genes

Program Settings