Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 8.4e-42 173.3 91 100.0
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 1.8e-12 75.9 42 90.5
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 4.1e-12 74.7 53 66.0
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 6.9e-12 73.9 48 77.1
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 6.9e-12 73.9 42 83.3
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 6.9e-12 73.9 46 78.3
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 1.2e-11 73.2 42 85.7
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 1.2e-11 73.2 45 75.6
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 2.6e-11 72.0 41 82.9
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 2.6e-11 72.0 42 83.3
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 3.4e-11 71.6 47 74.5
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 3.4e-11 71.6 48 70.8
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 4.5e-11 71.2 46 76.1
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 4.5e-11 71.2 42 78.6
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 4.5e-11 71.2 49 69.4
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 7.7e-11 70.5 42 81.0
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 7.7e-11 70.5 42 81.0
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 7.7e-11 70.5 41 80.5
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 1.3e-10 69.7 42 85.7
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 1.3e-10 69.7 42 78.6
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 1.7e-10 69.3 41 80.5
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 6.5e-10 67.4 44 79.5
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 6.5e-10 67.4 46 73.9
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 6.5e-10 67.4 48 62.5
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 6.5e-10 67.4 42 81.0
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 8.5e-10 67.0 42 73.8
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.1e-09 66.6 42 78.6
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.1e-09 66.6 42 78.6
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 1.1e-09 66.6 48 66.7
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 1.4e-09 66.2 49 75.5
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 1.4e-09 66.2 42 76.2
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 1.4e-09 66.2 41 73.2
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 1.9e-09 65.9 37 83.8
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 1.9e-09 65.9 39 82.1
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 1.9e-09 65.9 42 76.2
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 2.5e-09 65.5 70 54.3
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 2.5e-09 65.5 42 76.2
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 2.5e-09 65.5 42 78.6
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 2.5e-09 65.5 42 78.6
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 3.2e-09 65.1 42 73.8
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 3.2e-09 65.1 42 76.2
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 4.2e-09 64.7 46 67.4
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 4.2e-09 64.7 42 78.6
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 4.2e-09 64.7 42 69.0
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 5.5e-09 64.3 46 67.4
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 5.5e-09 64.3 56 55.4
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 5.5e-09 64.3 48 66.7
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 7.2e-09 63.9 42 76.2
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 7.2e-09 63.9 42 76.2
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 7.2e-09 63.9 42 76.2
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 7.2e-09 63.9 42 73.8
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 1.6e-08 62.8 42 73.8
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 2.7e-08 62.0 43 65.1
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 1.8e-07 59.3 42 69.0
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 1.1e-06 56.6 42 61.9
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 1.1e-06 56.6 46 56.5
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 1.5e-06 56.2 46 60.9
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 2.6e-06 55.5 48 52.1
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 2.6e-06 55.5 48 52.1
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 4.4e-06 54.7 42 59.5
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 4.4e-06 54.7 42 64.3
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 4.4e-06 54.7 46 54.3
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 5.7e-06 54.3 45 53.3
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 7.4e-06 53.9 48 52.1
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 9.7e-06 53.5 46 54.3
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 9.7e-06 53.5 46 54.3
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 9.7e-06 53.5 46 52.2


User provided reference genes

Program Settings