Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 4.2e-212 741.9 639 100.0
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 6.9e-66 256.1 283 57.6
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.2e-62 245.4 283 56.2
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 1.0e-61 242.3 280 53.6
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 1.8e-61 241.5 291 49.8
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 1.1e-60 238.8 273 48.7
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 6.9e-58 229.6 247 51.4
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 1.5e-57 228.4 286 48.3
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 1.5e-57 228.4 247 49.8
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 4.5e-57 226.9 292 47.3
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 1.0e-56 225.7 268 48.9
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 1.7e-56 224.9 238 50.8
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 1.1e-55 222.2 269 46.1
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 2.5e-55 221.1 289 47.4
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 3.2e-55 220.7 256 48.4
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.2e-55 220.7 322 48.4
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 7.2e-55 219.5 322 48.4
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 6.1e-54 216.5 282 45.0
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 7.9e-54 216.1 206 54.4
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 3.3e-52 210.7 289 45.0
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 3.3e-52 210.7 289 45.0
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 9.7e-52 209.1 289 43.9
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 9.7e-52 209.1 284 47.2
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 2.8e-51 207.6 268 44.8
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 8.2e-51 206.1 275 46.9
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 1.1e-50 205.7 283 44.5
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 4.1e-50 203.8 293 45.4
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 2.0e-49 201.4 265 44.9
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 4.5e-49 200.3 265 46.0
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 5.9e-49 199.9 185 56.2
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 8.5e-48 196.1 236 43.6
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 1.1e-47 195.7 264 45.5
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 3.2e-47 194.1 250 43.6
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 9.4e-47 192.6 264 46.2
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 2.7e-46 191.0 287 41.8
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 5.2e-45 186.8 289 42.6
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 1.5e-44 185.3 272 45.6
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 2.6e-44 184.5 259 40.9
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 5.7e-44 183.3 271 46.5
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 2.8e-43 181.0 272 43.0
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 3.7e-43 180.6 275 37.5
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 1.8e-42 178.3 275 37.8
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 4.1e-42 177.2 278 37.4
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 5.0e-40 170.2 268 45.1
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 1.9e-39 168.3 241 42.7
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 1.9e-39 168.3 215 48.4
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 2.5e-39 167.9 279 39.1
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.5e-39 167.9 253 41.5
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 2.5e-39 167.9 273 38.8
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 4.2e-39 167.2 255 39.6
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 1.2e-38 165.6 285 39.3
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.7e-38 164.5 253 41.1
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 2.7e-38 164.5 184 48.4
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 4.0e-37 160.6 267 39.3
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 4.0e-37 160.6 250 44.8
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 8.8e-37 159.5 198 45.5
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.5e-36 158.7 248 41.5
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 4.4e-36 157.1 282 39.0
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 5.7e-36 156.8 260 42.3
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 1.3e-35 155.6 222 46.4
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 3.7e-35 154.1 247 44.9
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 1.8e-34 151.8 295 37.3
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 1.6e-33 148.7 252 37.7
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 2.0e-33 148.3 266 36.8
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 2.7e-33 147.9 254 39.4
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 3.5e-33 147.5 222 40.1
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 3.5e-33 147.5 226 41.2
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 1.3e-32 145.6 295 36.3
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 2.2e-32 144.8 223 41.3
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 6.5e-32 143.3 219 42.0
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 8.5e-32 142.9 219 42.0
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.9e-31 141.7 275 36.7
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 1.2e-30 139.0 232 38.8
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 1.6e-30 138.7 225 38.7
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 1.6e-30 138.7 244 37.7
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 2.1e-30 138.3 232 38.4
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 1.4e-29 135.6 244 41.4
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 5.2e-29 133.7 206 41.3
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 6.8e-29 133.3 238 37.0
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 8.8e-29 132.9 182 42.9
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 1.2e-28 132.5 251 37.1
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 1.5e-28 132.1 206 41.3
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 2.0e-28 131.7 241 37.3
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 5.7e-28 130.2 259 34.7
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 1.7e-27 128.6 206 36.4
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 2.2e-27 128.3 268 35.8
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 4.8e-27 127.1 266 38.3
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 8.3e-27 126.3 200 37.0
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 1.4e-26 125.6 219 38.4
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 1.4e-26 125.6 219 35.2
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 2.4e-26 124.8 217 38.2
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 2.4e-26 124.8 290 34.5
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 4.1e-26 124.0 267 35.6
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 5.4e-26 123.6 251 35.1
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 7.0e-26 123.2 245 38.4
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 9.1e-26 122.9 278 37.1
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 9.1e-26 122.9 229 34.5
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 1.2e-25 122.5 239 36.0
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 1.2e-25 122.5 253 34.8
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 2.0e-25 121.7 179 44.1
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 4.5e-25 120.6 241 33.6
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 3.8e-24 117.5 165 44.2
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 8.6e-24 116.3 173 37.6
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 8.6e-24 116.3 224 33.5
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 3.3e-23 114.4 199 35.7
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 4.2e-23 114.0 196 36.7
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 1.2e-22 112.5 257 34.6
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 4.7e-22 110.5 278 36.3
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 1.0e-21 109.4 233 33.9
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 1.8e-21 108.6 224 40.6
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 2.3e-21 108.2 241 35.3
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 4.0e-21 107.5 263 31.9
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 8.9e-21 106.3 249 35.7
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 2.0e-20 105.1 266 30.5
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 1.4e-18 99.0 266 34.2
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 1.8e-18 98.6 170 38.2
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 2.5e-15 88.2 196 35.2
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 1.2e-14 85.9 196 35.2
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 3.6e-14 84.3 196 35.2
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 1.4e-13 82.4 212 34.0
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 6.8e-13 80.1 135 38.5
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 2.6e-12 78.2 138 41.3
DCAR_019537 Daucus carota HOM05D006278 ORTHO05D007526 5.4e-10 70.5 227 31.3
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 6.6e-08 63.5 158 32.9
arahy.Tifrunner.gnm1.ann1.1EJ222 Arachis hypogaea HOM05D004242 ORTHO05D004349 3.3e-07 61.2 159 30.8
CiPaw.02G043100 Carya illinoinensis HOM05D004242 ORTHO05D004349 7.3e-07 60.1 112 36.6
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 7.3e-07 60.1 112 34.8
DCAR_020977 Daucus carota HOM05D006278 ORTHO05D007526 1.6e-06 58.9 207 29.5
Potri.002G175400 Populus trichocarpa HOM05D004242 ORTHO05D004349 2.1e-06 58.5 112 39.3
Zm00001eb126760 Zea mays HOM05D041344 ORTHO05D037183 2.1e-06 58.5 147 37.4
Zm00001eb334230 Zea mays HOM05D041344 ORTHO05D037183 2.8e-06 58.2 141 36.9
ATR0796G195 Amborella trichopoda HOM05D004242 ORTHO05D004349 3.6e-06 57.8 105 35.2
Peaxi162Scf00014g00294 Petunia axillaris HOM05D004242 ORTHO05D004349 6.2e-06 57.0 137 32.8
CSS0040523 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 8.0e-06 56.6 119 32.8
Duzib138G0794 Durio zibethinus HOM05D004242 ORTHO05D004349 8.0e-06 56.6 111 39.6
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 8.0e-06 56.6 111 42.3


User provided reference genes

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