Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.3e-48 196.1 98 100.0
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.3e-24 116.3 65 90.8
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 8.5e-24 113.6 65 81.5
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 4.2e-23 111.3 65 80.0
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.7e-22 108.6 65 78.5
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 8.0e-22 107.1 65 76.9
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 8.0e-22 107.1 66 80.3
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.8e-21 105.9 65 75.4
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 2.3e-21 105.5 66 78.8
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 3.0e-21 105.1 65 76.9
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 4.0e-21 104.8 65 75.4
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 5.2e-21 104.4 65 78.5
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 5.2e-21 104.4 65 76.9
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 8.8e-21 103.6 68 76.5
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.1e-20 103.2 65 73.8
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.1e-20 103.2 67 80.6
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.0e-20 102.4 68 76.5
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 2.6e-20 102.1 67 76.1
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 3.3e-20 101.7 65 73.8
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 5.7e-20 100.9 67 80.6
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 5.7e-20 100.9 67 80.6
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 7.4e-20 100.5 67 73.1
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 7.4e-20 100.5 66 75.8
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 1.3e-19 99.8 65 72.3
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.7e-19 99.4 62 74.2
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.7e-19 99.4 67 73.1
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.7e-19 99.4 65 70.8
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.7e-19 99.4 65 75.4
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 1.7e-19 99.4 65 69.2
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.2e-19 99.0 65 70.8
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 3.7e-19 98.2 67 71.6
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 3.7e-19 98.2 65 66.2
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 3.7e-19 98.2 65 70.8
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 6.3e-19 97.4 66 72.7
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 8.2e-19 97.1 66 74.2
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 8.2e-19 97.1 66 74.2
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 8.2e-19 97.1 66 74.2
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 8.2e-19 97.1 65 72.3
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 8.2e-19 97.1 65 72.3
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.1e-18 96.7 68 73.5
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.1e-18 96.7 65 75.4
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 1.4e-18 96.3 66 74.2
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 1.8e-18 95.9 66 71.2
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 2.4e-18 95.5 65 72.3
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.4e-18 95.5 65 67.7
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 4.1e-18 94.7 66 74.2
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 4.1e-18 94.7 66 74.2
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 4.1e-18 94.7 66 74.2
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 4.1e-18 94.7 66 74.2
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 4.1e-18 94.7 65 72.3
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 4.1e-18 94.7 66 69.7
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 4.1e-18 94.7 66 69.7
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 5.3e-18 94.4 66 69.7
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 5.3e-18 94.4 65 67.7
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 7.0e-18 94.0 62 72.6
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 7.0e-18 94.0 66 71.2
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 9.1e-18 93.6 66 72.7
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 9.1e-18 93.6 66 72.7
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 9.1e-18 93.6 65 69.2
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 9.1e-18 93.6 66 72.7
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 1.2e-17 93.2 68 69.1
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.2e-17 93.2 65 64.6
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.2e-17 93.2 66 72.7
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 1.6e-17 92.8 67 73.1
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.6e-17 92.8 67 73.1
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 2.6e-17 92.0 66 72.7
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 2.6e-17 92.0 65 72.3
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 7.7e-17 90.5 67 71.6
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 7.7e-17 90.5 65 75.4
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 1.0e-16 90.1 65 69.2
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.3e-16 89.7 65 69.2
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.3e-16 89.7 67 64.2
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.7e-16 89.4 66 69.7
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.7e-16 89.4 65 72.3
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 2.2e-16 89.0 67 68.7
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.2e-16 89.0 66 68.2
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 2.9e-16 88.6 69 72.5
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 3.8e-16 88.2 66 71.2
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 3.8e-16 88.2 66 71.2
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 3.8e-16 88.2 65 67.7
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.8e-16 88.2 68 70.6
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 6.5e-16 87.4 66 68.2
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 8.5e-16 87.0 68 69.1
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 8.5e-16 87.0 66 69.7
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 1.5e-15 86.3 66 69.7
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 3.2e-15 85.1 68 69.1
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 4.2e-15 84.7 79 58.2
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 4.2e-15 84.7 66 66.7
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 4.2e-15 84.7 66 66.7
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 7.2e-15 84.0 66 68.2
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 2.7e-14 82.0 66 63.6
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 4.7e-14 81.3 70 65.7
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 5.2e-13 77.8 54 70.4
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 1.2e-12 76.6 71 66.2
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.5e-12 76.3 67 62.7
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 2.0e-12 75.9 54 68.5
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 2.2e-11 72.4 67 58.2
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.2e-11 72.4 67 58.2
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.2e-11 72.4 67 58.2
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.8e-11 72.0 67 58.2
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 8.3e-11 70.5 72 61.1
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.8e-10 69.3 65 61.5
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 5.4e-10 67.8 65 55.4
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.2e-09 66.6 67 59.7
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 5.9e-09 64.3 57 59.6
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 1.3e-08 63.2 50 64.0
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 2.9e-08 62.0 44 70.5


User provided reference genes

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