Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR086G0001 Trochodendron aralioides HOM05D007837 ORTHO05D009965 6.7e-34 146.7 72 100.0
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 5.1e-26 120.6 62 90.3
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 1.5e-25 119.0 62 91.9
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 5.7e-25 117.1 61 90.2
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 1.3e-24 115.9 62 85.5
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 1.3e-24 115.9 62 87.1
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 2.8e-24 114.8 61 86.9
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 1.1e-23 112.8 62 85.5
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 1.1e-23 112.8 68 77.9
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 1.4e-23 112.5 62 83.9
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 1.4e-23 112.5 67 79.1
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 1.4e-23 112.5 67 79.1
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 1.4e-23 112.5 68 76.5
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 4.0e-23 110.9 62 83.9
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 5.3e-23 110.5 62 80.6
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 9.0e-23 109.8 62 80.6
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 1.2e-22 109.4 62 82.3
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 1.5e-22 109.0 62 82.3
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 1.5e-22 109.0 62 83.9
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 2.0e-22 108.6 61 83.6
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 2.0e-22 108.6 62 80.6
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 2.0e-22 108.6 62 80.6
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 2.0e-22 108.6 68 76.5
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 2.6e-22 108.2 62 83.9
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 5.8e-22 107.1 62 77.4
MBI18_g28215_MAGBIO Magnolia biondii HOM05D007837 ORTHO05D009965 7.6e-22 106.7 62 79.0
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 7.6e-22 106.7 62 77.4
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 1.3e-21 105.9 62 79.0
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 1.7e-21 105.5 62 77.4
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.2e-21 105.1 62 79.0
Potri.001G443025 Populus trichocarpa HOM05D007837 ORTHO05D009965 2.9e-21 104.8 62 75.8
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.9e-21 104.8 62 79.0
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.9e-21 104.8 62 79.0
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 6.5e-21 103.6 62 74.2
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 8.4e-21 103.2 62 75.8
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 1.1e-20 102.8 62 75.8
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 1.1e-20 102.8 63 74.6
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 2.5e-20 101.7 62 75.8
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 2.5e-20 101.7 62 75.8
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 9.3e-20 99.8 62 74.2
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 9.3e-20 99.8 62 74.2
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 2.1e-19 98.6 68 67.6
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 2.7e-19 98.2 62 74.2
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 2.7e-19 98.2 62 74.2
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 3.5e-19 97.8 60 73.3
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 1.8e-18 95.5 62 71.0
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 3.0e-18 94.7 62 71.0
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 5.1e-18 94.0 62 74.2
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 6.7e-18 93.6 60 71.7
Medtr4g035250 Medicago truncatula HOM05D007837 ORTHO05D009965 1.5e-17 92.4 62 67.7
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 2.5e-17 91.7 62 67.7
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 3.3e-17 91.3 62 66.1
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 4.3e-17 90.9 62 67.7
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 7.4e-17 90.1 62 67.7
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 7.4e-17 90.1 62 67.7
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 7.4e-17 90.1 60 68.3
Nitab4.5_0011721g0030 Nicotiana tabacum HOM05D007837 ORTHO05D009965 9.7e-17 89.7 91 53.8
Sabra11G0145700 Salix brachista HOM05D007837 ORTHO05D009965 1.3e-16 89.4 55 74.5
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 2.2e-16 88.6 62 66.1
FAN16G2143 Fragaria x ananassa HOM05D007837 ORTHO05D009965 6.3e-16 87.0 62 66.1
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 8.2e-16 86.7 66 60.6
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 1.5e-14 82.4 64 62.5
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 1.7e-13 79.0 68 58.8
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 2.0e-09 65.5 61 54.1
arahy.Tifrunner.gnm1.ann1.SA9RL2 Arachis hypogaea HOM05D007837 ORTHO05D009965 2.0e-06 55.5 33 72.7
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.0e-06 55.5 68 42.6
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 5.9e-06 53.9 61 42.6
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 5.9e-06 53.9 61 42.6
Glyma.03G069100 Glycine max HOM05D007837 ORTHO05D009965 7.7e-06 53.5 33 72.7


User provided reference genes

Program Settings